RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 ST6GALNAC2Q9UJ37 374 aa14.51□□□□□ -0.09
CUX1-213ENST00000549414 SCO1O75880 301 aa14.5□□□□□ -0.09
CUX1-213ENST00000549414 BGLAPP02818 100 aa14.5□□□□□ -0.09
CUX1-213ENST00000549414 CCL3P10147 92 aa14.5□□□□□ -0.09
CUX1-213ENST00000549414 HAAOP46952 286 aa14.5□□□□□ -0.09
CUX1-213ENST00000549414 GLDNQ6ZMI3 551 aaPredicted RBP14.5□□□□□ -0.09
CUX1-213ENST00000549414 EXD3Q8N9H8 876 aa14.5□□□□□ -0.09
CUX1-213ENST00000549414 PPP1R35Q8TAP8 253 aa14.5□□□□□ -0.09
CUX1-213ENST00000549414 UCN2Q96RP3 112 aa14.5□□□□□ -0.09
CUX1-213ENST00000549414 GNG12Q9UBI6 72 aa14.5□□□□□ -0.09
CUX1-213ENST00000549414 KLF13Q9Y2Y9 288 aaPredicted RBP14.5□□□□□ -0.09
CUX1-213ENST00000549414 ABCA4P78363 2273 aa14.5□□□□□ -0.09
CUX1-213ENST00000549414 LIPT2A6NK58 231 aa14.5□□□□□ -0.09
CUX1-213ENST00000549414 SNRPGP15A8MWD9 76 aa14.5□□□□□ -0.09
CUX1-213ENST00000549414 CSF2RBP32927 897 aa14.5□□□□□ -0.09
CUX1-213ENST00000549414 FHL5Q5TD97 284 aa14.5□□□□□ -0.09
CUX1-213ENST00000549414 SDSLQ96GA7 329 aa14.5□□□□□ -0.09
CUX1-213ENST00000549414 AMELYQ99218 206 aa14.5□□□□□ -0.09
CUX1-213ENST00000549414 C12orf10Q9HB07 376 aa14.5□□□□□ -0.09
CUX1-213ENST00000549414 ZNF71Q9NQZ8 489 aaPredicted RBP14.5□□□□□ -0.09
CUX1-213ENST00000549414 ZNF275Q9NSD4 429 aaPredicted RBP14.5□□□□□ -0.09
CUX1-213ENST00000549414 MDC1Q14676 2089 aaKnown RBP14.5□□□□□ -0.09
CUX1-213ENST00000549414 TUSC2O75896 110 aa14.5□□□□□ -0.09
CUX1-213ENST00000549414 RHEBQ15382 184 aa14.5□□□□□ -0.09
CUX1-213ENST00000549414 KISS1Q15726 138 aa14.5□□□□□ -0.09
CUX1-213ENST00000549414 FBXL14Q8N1E6 418 aa14.5□□□□□ -0.09
CUX1-213ENST00000549414 MUC20Q8N307 709 aaPredicted RBP14.5□□□□□ -0.09
CUX1-213ENST00000549414 SCARB1Q8WTV0 552 aa14.5□□□□□ -0.09
CUX1-213ENST00000549414 TAAR9Q96RI9 348 aa14.5□□□□□ -0.09
CUX1-213ENST00000549414 NELFAQ9H3P2 528 aa14.5□□□□□ -0.09
CUX1-213ENST00000549414 ZNF32P17041 273 aa14.49□□□□□ -0.09
CUX1-213ENST00000549414 TNFSF4P23510 183 aa14.49□□□□□ -0.09
CUX1-213ENST00000549414 OR3A4PP47883 348 aa14.49□□□□□ -0.09
CUX1-213ENST00000549414 RPL23AP62750 156 aaKnown RBP14.49□□□□□ -0.09
CUX1-213ENST00000549414 INSM1Q01101 510 aaPredicted RBP14.49□□□□□ -0.09
CUX1-213ENST00000549414 OR1C1Q15619 314 aa14.49□□□□□ -0.09
CUX1-213ENST00000549414 DUSP18Q8NEJ0 188 aa14.49□□□□□ -0.09
CUX1-213ENST00000549414 FAM213BQ8TBF2 198 aa14.49□□□□□ -0.09
CUX1-213ENST00000549414 KCNE4Q8WWG9 221 aa14.49□□□□□ -0.09
CUX1-213ENST00000549414 ASB10Q8WXI3 467 aa14.49□□□□□ -0.09
CUX1-213ENST00000549414 PPP1R3EQ9H7J1 279 aa14.49□□□□□ -0.09
CUX1-213ENST00000549414 NOTCH3Q9UM47 2321 aa14.49□□□□□ -0.09
CUX1-213ENST00000549414 ICMTO60725 284 aa14.49□□□□□ -0.09
CUX1-213ENST00000549414 HPXP02790 462 aa14.49□□□□□ -0.09
CUX1-213ENST00000549414 SNRNP70P08621 437 aaKnown RBP14.49□□□□□ -0.09
CUX1-213ENST00000549414 CCL2P13500 99 aa14.49□□□□□ -0.09
CUX1-213ENST00000549414 MGAT2Q10469 447 aa14.49□□□□□ -0.09
CUX1-213ENST00000549414 SPINK14Q6IE38 97 aa14.49□□□□□ -0.09
CUX1-213ENST00000549414 UBALD1Q8TB05 177 aa14.49□□□□□ -0.09
CUX1-213ENST00000549414 CTHRC1Q96CG8 243 aa14.49□□□□□ -0.09
CUX1-213ENST00000549414 TRIB1Q96RU8 372 aa14.49□□□□□ -0.09
CUX1-213ENST00000549414 A0A1W2PQD3 144 aa14.49□□□□□ -0.09
CUX1-213ENST00000549414 A0A1W2PR80 420 aa14.49□□□□□ -0.09
CUX1-213ENST00000549414 FCGR2CP31995 323 aa14.49□□□□□ -0.09
CUX1-213ENST00000549414 RPL35P42766 123 aaKnown RBP14.49□□□□□ -0.09
CUX1-213ENST00000549414 NXF2Q9GZY0 626 aaKnown RBP14.49□□□□□ -0.09
CUX1-213ENST00000549414 CREBBPQ92793 2442 aa14.49□□□□□ -0.09
CUX1-213ENST00000549414 IL2RAP01589 272 aa14.49□□□□□ -0.09
CUX1-213ENST00000549414 PSMB6P28072 239 aa14.49□□□□□ -0.09
CUX1-213ENST00000549414 CD96P40200 585 aa14.49□□□□□ -0.09
CUX1-213ENST00000549414 WDR5BQ86VZ2 330 aa14.49□□□□□ -0.09
CUX1-213ENST00000549414 OR10D3Q8NH80 312 aa14.49□□□□□ -0.09
CUX1-213ENST00000549414 MASP2O00187 686 aa14.48□□□□□ -0.09
CUX1-213ENST00000549414 AGFG1P52594 562 aaKnown RBP14.48□□□□□ -0.09
CUX1-213ENST00000549414 EFNB2P52799 333 aa14.48□□□□□ -0.09
CUX1-213ENST00000549414 SHEQ5VZ18 495 aa14.48□□□□□ -0.09
CUX1-213ENST00000549414 ZNF529Q6P280 563 aa14.48□□□□□ -0.09
CUX1-213ENST00000549414 PRSS42Q7Z5A4 293 aa14.48□□□□□ -0.09
CUX1-213ENST00000549414 GCNT2Q8N0V5 402 aa14.48□□□□□ -0.09
CUX1-213ENST00000549414 OR2Y1Q8NGV0 311 aa14.48□□□□□ -0.09
CUX1-213ENST00000549414 OR1F12Q8NHA8 337 aa14.48□□□□□ -0.09
CUX1-213ENST00000549414 SGK3Q96BR1 496 aa14.48□□□□□ -0.09
CUX1-213ENST00000549414 NMNAT2Q9BZQ4 307 aa14.48□□□□□ -0.09
CUX1-213ENST00000549414 DUSP15Q9H1R2 295 aaPredicted RBP14.48□□□□□ -0.09
CUX1-213ENST00000549414 UCK1Q9HA47 277 aa14.48□□□□□ -0.09
CUX1-213ENST00000549414 SDHAF2Q9NX18 166 aa14.48□□□□□ -0.09
CUX1-213ENST00000549414 HLA-HP01893 362 aa14.48□□□□□ -0.09
CUX1-213ENST00000549414 TMEM200AQ86VY9 491 aa14.48□□□□□ -0.09
CUX1-213ENST00000549414 SULT1C2O00338 296 aa14.48□□□□□ -0.09
CUX1-213ENST00000549414 DEGS1O15121 323 aa14.48□□□□□ -0.09
CUX1-213ENST00000549414 TBC1D28Q2M2D7 210 aa14.48□□□□□ -0.09
CUX1-213ENST00000549414 SHISA5Q8N114 240 aa14.48□□□□□ -0.09
CUX1-213ENST00000549414 FLVCR1Q9Y5Y0 555 aa14.48□□□□□ -0.09
CUX1-213ENST00000549414 MTCL1Q9Y4B5 1905 aaKnown RBP14.48□□□□□ -0.09
CUX1-213ENST00000549414 MEX3AA1L020 520 aaKnown RBP14.47□□□□□ -0.09
CUX1-213ENST00000549414 CEBPZOSA8MTT3 80 aa14.47□□□□□ -0.09
CUX1-213ENST00000549414 MSTNO14793 375 aa14.47□□□□□ -0.09
CUX1-213ENST00000549414 PNLIPP16233 465 aa14.47□□□□□ -0.09
CUX1-213ENST00000549414 LPCAT3Q6P1A2 487 aa14.47□□□□□ -0.09
CUX1-213ENST00000549414 DEGS2Q6QHC5 323 aa14.47□□□□□ -0.09
CUX1-213ENST00000549414 LGI3Q8N145 548 aa14.47□□□□□ -0.09
CUX1-213ENST00000549414 TERB2Q8NHR7 220 aa14.47□□□□□ -0.09
CUX1-213ENST00000549414 NGBQ9NPG2 151 aa14.47□□□□□ -0.09
CUX1-213ENST00000549414 ZNF354AO60765 605 aaPredicted RBP14.47□□□□□ -0.09
CUX1-213ENST00000549414 WNT11O96014 354 aa14.47□□□□□ -0.09
CUX1-213ENST00000549414 EDDM3BP56851 147 aa14.47□□□□□ -0.09
CUX1-213ENST00000549414 ARF1P84077 181 aaKnown RBP14.47□□□□□ -0.09
CUX1-213ENST00000549414 SP6Q3SY56 376 aa14.47□□□□□ -0.09
CUX1-213ENST00000549414 OR8B12Q8NGG6 310 aa14.47□□□□□ -0.09
CUX1-213ENST00000549414 SEH1LQ96EE3 360 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms