RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 FAM46AQ96IP4 442 aaKnown RBP4.18□□□□□ -1.74
SCAF11-212ENST00000549162 OR14A2Q96R54 314 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 SULT4A1Q9BR01 284 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 FUNDC2Q9BWH2 189 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 OR51I2Q9H344 312 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 DSN1Q9H410 356 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 TAS2R8Q9NYW2 309 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 KLK13Q9UKR3 277 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 SHANK1Q9Y566 2161 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 KMT2BQ9UMN6 2715 aaPredicted RBP4.18□□□□□ -1.74
SCAF11-212ENST00000549162 SNRPGP15A8MWD9 76 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 F8W735 103 aaPredicted RBP4.18□□□□□ -1.74
SCAF11-212ENST00000549162 RBFOX2O43251 390 aaKnown RBP eCLIP4.18□□□□□ -1.74
SCAF11-212ENST00000549162 PRAF2O60831 178 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 TOXO94900 526 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 PNPP00491 289 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 GLRXP35754 106 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 CD83Q01151 205 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 MEF2CQ06413 473 aaPredicted RBP4.18□□□□□ -1.74
SCAF11-212ENST00000549162 ETFDHQ16134 617 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 CASP12Q6UXS9 341 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 C11orf53Q8IXP5 236 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 OR13C2Q8NGS9 318 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 OR52J3Q8NH60 311 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 OR10D3Q8NH80 312 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 RORBQ92753 470 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 SAMD8Q96LT4 415 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 PCGF1Q9BSM1 259 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 NEK6Q9HC98 313 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 R4GN57 208 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 ANKRD20A5PA0PJZ0 165 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 TMEM89A2RUT3 159 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 GGT3PA6NGU5 568 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 OR5H1A6NKK0 313 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 ORC5O43913 435 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 ECDO95905 644 aaPredicted RBP4.17□□□□□ -1.74
SCAF11-212ENST00000549162 LUMP51884 338 aaPredicted RBP4.17□□□□□ -1.74
SCAF11-212ENST00000549162 PTTG1IPP53801 180 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 CAV3P56539 151 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 ZNF846Q147U1 533 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 PON3Q15166 354 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 KCTD19Q17RG1 926 aaPredicted RBP4.17□□□□□ -1.74
SCAF11-212ENST00000549162 C19orf54Q5BKX5 351 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 PHYHD1Q5SRE7 291 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 OR4K17Q8NGC6 315 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 OR1F12Q8NHA8 337 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 SMIM4Q8WVI0 70 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 ALG8Q9BVK2 526 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 BARHL1Q9BZE3 327 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 SEMA6AQ9H2E6 1030 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 ELOVL3Q9HB03 270 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 PPP1R14DQ9NXH3 145 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 MCTS1Q9ULC4 181 aaKnown RBP4.17□□□□□ -1.74
SCAF11-212ENST00000549162 COPS3Q9UNS2 423 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 A0A1W2PQL4 384 aaPredicted RBP4.17□□□□□ -1.74
SCAF11-212ENST00000549162 SAP18O00422 153 aaKnown RBP4.17□□□□□ -1.74
SCAF11-212ENST00000549162 ZNF735P0CB33 412 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 PRKAR1AP10644 381 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 SRMP19623 302 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 MC5RP33032 325 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 CCR4P51679 360 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 SPCS2Q15005 226 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 SHISA2Q6UWI4 295 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 ARSKQ6UWY0 536 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 FAM185AQ8N0U4 392 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 DEFB124Q8NES8 71 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 XAGE5Q8WWM1 108 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 SAT2Q96F10 170 aaPredicted RBP4.17□□□□□ -1.74
SCAF11-212ENST00000549162 THOC3Q96J01 351 aaKnown RBP4.17□□□□□ -1.74
SCAF11-212ENST00000549162 LURAP1Q96LR2 239 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 ALKBH3Q96Q83 286 aaPredicted RBP4.17□□□□□ -1.74
SCAF11-212ENST00000549162 MGLLQ99685 303 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 MARVELD1Q9BSK0 173 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 RPS6KB2Q9UBS0 482 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 IL19Q9UHD0 177 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 STEAP1Q9UHE8 339 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 ZNF230Q9UIE0 474 aaPredicted RBP4.17□□□□□ -1.74
SCAF11-212ENST00000549162 KCNK7Q9Y2U2 307 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 PCNX3Q9H6A9 2034 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 SERPINE3A8MV23 424 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 ST8SIA5O15466 376 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 AKR7A3O95154 331 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 CFIP05156 583 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 PGA5P0DJD9 388 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 CCKARP32238 428 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 CD79BP40259 229 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 FUT6P51993 359 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 KLF3P57682 345 aaPredicted RBP4.17□□□□□ -1.74
SCAF11-212ENST00000549162 ST3GAL4Q11206 333 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 ZNF260Q3ZCT1 412 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 SLC36A2Q495M3 483 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 SLC35E4Q6ICL7 350 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 Q6P435 159 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 TMEM154Q6P9G4 183 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 WIPF2Q8TF74 440 aaPredicted RBP4.17□□□□□ -1.74
SCAF11-212ENST00000549162 GIMAP1Q8WWP7 306 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 RAB8BQ92930 207 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 GALNT14Q96FL9 552 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 SH3YL1Q96HL8 342 aaPredicted RBP4.17□□□□□ -1.74
SCAF11-212ENST00000549162 KLHDC3Q9BQ90 382 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms