RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 PRKACGP22612 351 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 GCKP35557 465 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 RPS4XP62701 263 aaKnown RBP3.17□□□□□ -1.9
APAF1-208ENST00000549007 LTBQ06643 244 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 IL24Q13007 206 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 SELENBP1Q13228 472 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 ACSF3Q4G176 576 aaPredicted RBP3.17□□□□□ -1.9
APAF1-208ENST00000549007 C1orf140Q5VVS0 124 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 ULK3Q6PHR2 472 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 CD164L2Q6UWJ8 174 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 ZNF730Q6ZMV8 503 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 NRMQ8IXM6 262 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 TMEM99Q8N816 258 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 ST6GALNAC3Q8NDV1 305 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 FAM57AQ8TBR7 257 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 SLC7A13Q8TCU3 470 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 RASSF5Q8WWW0 418 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 PRRC1Q96M27 445 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 TRIM15Q9C019 465 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 RIBC2Q9H4K1 309 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 RAB18Q9NP72 206 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 MEPEQ9NQ76 525 aaPredicted RBP3.17□□□□□ -1.9
APAF1-208ENST00000549007 ACOXLQ9NUZ1 547 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 QPCTLQ9NXS2 382 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 FAM32AQ9Y421 112 aaKnown RBP3.17□□□□□ -1.9
APAF1-208ENST00000549007 TENM4Q6N022 2769 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 UTP20O75691 2785 aaKnown RBP3.17□□□□□ -1.9
APAF1-208ENST00000549007 TRAV27A0A087WT01 109 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 A0A087WUJ7 227 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 A0A087WUU8 490 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 A0A087WZ39 114 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 TCRBV3S1A0A5B6 114 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 H0YL77 283 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 CHP2O43745 196 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 ZG16O60844 167 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 TOXO94900 526 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 AHSA1O95433 338 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 CST1P01037 141 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 IGHV3-9P01782 118 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 IGFBP1P08833 259 aaPredicted RBP3.17□□□□□ -1.9
APAF1-208ENST00000549007 IFI30P13284 250 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 ZNF17P17021 662 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 RPL35AP18077 110 aaKnown RBP3.17□□□□□ -1.9
APAF1-208ENST00000549007 GRPRP30550 384 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 EIF1P41567 113 aaKnown RBP3.17□□□□□ -1.9
APAF1-208ENST00000549007 PTGFRP43088 359 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 CARD18P57730 90 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 NANOS3P60323 173 aaKnown RBP3.17□□□□□ -1.9
APAF1-208ENST00000549007 KLF5Q13887 457 aaPredicted RBP3.17□□□□□ -1.9
APAF1-208ENST00000549007 FAM159AQ6UWV7 190 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 CHMP1BQ7LBR1 199 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 P4HA3Q7Z4N8 544 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 WDFY1Q8IWB7 410 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 C10orf67Q8IYJ2 551 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 OR8J1Q8NGP2 316 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 OR13C2Q8NGS9 318 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 SLC38A4Q969I6 547 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 GPA33Q99795 319 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 IL1RAPQ9NPH3 570 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 ZFP57Q9NU63 452 aa3.17□□□□□ -1.9
APAF1-208ENST00000549007 SAMHD1Q9Y3Z3 626 aaKnown RBP3.17□□□□□ -1.9
APAF1-208ENST00000549007 A0A1W2PN81 502 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 CLEC18AA5D8T8 446 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 SLC22A20A6NK97 555 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 TNFRSF11BO00300 401 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 GNGT2O14610 69 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 CDC42EP2O14613 210 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 E2F6O75461 281 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 OR5F1O95221 314 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 GADD45GO95257 159 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 CLDN1O95832 211 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 ACTL6AO96019 429 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 HPRP00739 348 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 THRBP10828 461 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 SELEP16581 610 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 CHRNA7P36544 502 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 GSSP48637 474 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 ACTR3P61158 418 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 TRAM2Q15035 370 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 C1orf185Q5T7R7 199 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 C11orf87Q6NUJ2 197 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 ZNF613Q6PF04 617 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 TTC33Q6PID6 262 aaPredicted RBP3.16□□□□□ -1.9
APAF1-208ENST00000549007 RBMS3Q6XE24 437 aaKnown RBP3.16□□□□□ -1.9
APAF1-208ENST00000549007 TMPPEQ6ZT21 453 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 CYP4Z1Q86W10 505 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 OFCC1Q8IZS5 231 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 CNEP1R1Q8N9A8 125 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 CLEC18CQ8NCF0 446 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 ICA1LQ8NDH6 482 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 OR4K5Q8NGD3 323 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 OR51A7Q8NH64 312 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 DNAJA4Q8WW22 397 aaPredicted RBP3.16□□□□□ -1.9
APAF1-208ENST00000549007 TMEM239Q8WW34 195 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 DDIT4LQ96D03 193 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 MED30Q96HR3 178 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 ERRFI1Q9UJM3 462 aaPredicted RBP3.16□□□□□ -1.9
APAF1-208ENST00000549007 DOPEY2Q9Y3R5 2298 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 HECTD1Q9ULT8 2610 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 BLOC1S5-TXNDC5H3BN57 136 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms