RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 WFDC12Q8WWY7 111 aa14.37□□□□□ -0.11
CHMP1A-205ENST00000548650 GATAD2BQ8WXI9 593 aa14.37□□□□□ -0.11
CHMP1A-205ENST00000548650 ST8SIA4Q92187 359 aa14.37□□□□□ -0.11
CHMP1A-205ENST00000548650 CCDC124Q96CT7 223 aaKnown RBP14.37□□□□□ -0.11
CHMP1A-205ENST00000548650 ASB9Q96DX5 294 aa14.37□□□□□ -0.11
CHMP1A-205ENST00000548650 PAPOLGQ9BWT3 736 aaKnown RBP14.37□□□□□ -0.11
CHMP1A-205ENST00000548650 TLNRD1Q9H1K6 362 aa14.37□□□□□ -0.11
CHMP1A-205ENST00000548650 TNFRSF19Q9NS68 423 aa14.37□□□□□ -0.11
CHMP1A-205ENST00000548650 RPUSD1Q9UJJ7 312 aaKnown RBP14.37□□□□□ -0.11
CHMP1A-205ENST00000548650 IGHV1-69DA0A0B4J2H0 117 aa14.36□□□□□ -0.11
CHMP1A-205ENST00000548650 H3BN98 237 aa14.36□□□□□ -0.11
CHMP1A-205ENST00000548650 TIPRLO75663 272 aa14.36□□□□□ -0.11
CHMP1A-205ENST00000548650 IGHV1-69P01742 117 aa14.36□□□□□ -0.11
CHMP1A-205ENST00000548650 APOC1P02654 83 aa14.36□□□□□ -0.11
CHMP1A-205ENST00000548650 RAP2AP10114 183 aa14.36□□□□□ -0.11
CHMP1A-205ENST00000548650 MUC1P15941 1255 aaPredicted RBP14.36□□□□□ -0.11
CHMP1A-205ENST00000548650 CFL1P23528 166 aaKnown RBP14.36□□□□□ -0.11
CHMP1A-205ENST00000548650 RAG2P55895 527 aa14.36□□□□□ -0.11
CHMP1A-205ENST00000548650 PDCD1Q15116 288 aa14.36□□□□□ -0.11
CHMP1A-205ENST00000548650 GFOD2Q3B7J2 385 aa14.36□□□□□ -0.11
CHMP1A-205ENST00000548650 WDR38Q5JTN6 314 aa14.36□□□□□ -0.11
CHMP1A-205ENST00000548650 RHOUQ7L0Q8 258 aa14.36□□□□□ -0.11
CHMP1A-205ENST00000548650 ADGRG5Q8IZF4 528 aa14.36□□□□□ -0.11
CHMP1A-205ENST00000548650 FAM216BQ8N7L0 139 aa14.36□□□□□ -0.11
CHMP1A-205ENST00000548650 ITPKCQ96DU7 683 aa14.36□□□□□ -0.11
CHMP1A-205ENST00000548650 NSL1Q96IY1 281 aa14.36□□□□□ -0.11
CHMP1A-205ENST00000548650 FAM71F1Q96KD3 344 aaPredicted RBP14.36□□□□□ -0.11
CHMP1A-205ENST00000548650 FEVQ99581 238 aa14.36□□□□□ -0.11
CHMP1A-205ENST00000548650 OR10A2Q9H208 303 aa14.36□□□□□ -0.11
CHMP1A-205ENST00000548650 SP140LQ9H930 580 aa14.36□□□□□ -0.11
CHMP1A-205ENST00000548650 ACOXLQ9NUZ1 547 aa14.36□□□□□ -0.11
CHMP1A-205ENST00000548650 C1RLQ9NZP8 487 aa14.36□□□□□ -0.11
CHMP1A-205ENST00000548650 PRPF19Q9UMS4 504 aaKnown RBP14.36□□□□□ -0.11
CHMP1A-205ENST00000548650 RHBDD3Q9Y3P4 386 aa14.36□□□□□ -0.11
CHMP1A-205ENST00000548650 POMT1Q9Y6A1 747 aa14.36□□□□□ -0.11
CHMP1A-205ENST00000548650 WNK1Q9H4A3 2382 aa14.36□□□□□ -0.11
CHMP1A-205ENST00000548650 NDUFA7O95182 113 aa14.35□□□□□ -0.11
CHMP1A-205ENST00000548650 ECDO95905 644 aaPredicted RBP14.35□□□□□ -0.11
CHMP1A-205ENST00000548650 T-ENOLP0DO92 83 aa14.35□□□□□ -0.11
CHMP1A-205ENST00000548650 CALB2P22676 271 aa14.35□□□□□ -0.11
CHMP1A-205ENST00000548650 ARF6P62330 175 aa14.35□□□□□ -0.11
CHMP1A-205ENST00000548650 TREML4Q6UXN2 200 aa14.35□□□□□ -0.11
CHMP1A-205ENST00000548650 SHFQ7M4L6 423 aa14.35□□□□□ -0.11
CHMP1A-205ENST00000548650 TMEM179BQ7Z7N9 219 aa14.35□□□□□ -0.11
CHMP1A-205ENST00000548650 CSNK2A3Q8NEV1 391 aa14.35□□□□□ -0.11
CHMP1A-205ENST00000548650 OR4F5Q8NH21 305 aa14.35□□□□□ -0.11
CHMP1A-205ENST00000548650 GIPC3Q8TF64 312 aa14.35□□□□□ -0.11
CHMP1A-205ENST00000548650 SSMEM1Q8WWF3 244 aa14.35□□□□□ -0.11
CHMP1A-205ENST00000548650 LHX4Q969G2 390 aa14.35□□□□□ -0.11
CHMP1A-205ENST00000548650 OTULINQ96BN8 352 aa14.35□□□□□ -0.11
CHMP1A-205ENST00000548650 SEH1LQ96EE3 360 aa14.35□□□□□ -0.11
CHMP1A-205ENST00000548650 CLPTM1LQ96KA5 538 aa14.35□□□□□ -0.11
CHMP1A-205ENST00000548650 CCL13Q99616 98 aa14.35□□□□□ -0.11
CHMP1A-205ENST00000548650 RGCCQ9H4X1 137 aa14.35□□□□□ -0.11
CHMP1A-205ENST00000548650 BRD7Q9NPI1 651 aa14.35□□□□□ -0.11
CHMP1A-205ENST00000548650 CMYA5Q8N3K9 4069 aa14.35□□□□□ -0.11
CHMP1A-205ENST00000548650 A0A0U1RQK1 487 aa14.34□□□□□ -0.11
CHMP1A-205ENST00000548650 A0A1B0GUS0 222 aa14.34□□□□□ -0.11
CHMP1A-205ENST00000548650 ACOT8O14734 319 aa14.34□□□□□ -0.11
CHMP1A-205ENST00000548650 SELENOFO60613 162 aa14.34□□□□□ -0.11
CHMP1A-205ENST00000548650 AMY2BP19961 511 aa14.34□□□□□ -0.11
CHMP1A-205ENST00000548650 PAICSP22234 425 aaKnown RBP14.34□□□□□ -0.11
CHMP1A-205ENST00000548650 ACKR3P25106 362 aa14.34□□□□□ -0.11
CHMP1A-205ENST00000548650 GNALP38405 381 aa14.34□□□□□ -0.11
CHMP1A-205ENST00000548650 MICBQ29980 383 aa14.34□□□□□ -0.11
CHMP1A-205ENST00000548650 CDONQ4KMG0 1287 aa14.34□□□□□ -0.11
CHMP1A-205ENST00000548650 STUMQ69YW2 141 aa14.34□□□□□ -0.11
CHMP1A-205ENST00000548650 PLBD1Q6P4A8 553 aa14.34□□□□□ -0.11
CHMP1A-205ENST00000548650 LDLRAD3Q86YD5 345 aa14.34□□□□□ -0.11
CHMP1A-205ENST00000548650 GALNT4Q8N4A0 578 aa14.34□□□□□ -0.11
CHMP1A-205ENST00000548650 OTOSQ8NHW6 89 aa14.34□□□□□ -0.11
CHMP1A-205ENST00000548650 C12orf43Q96C57 262 aaKnown RBP14.34□□□□□ -0.11
CHMP1A-205ENST00000548650 PGAM5Q96HS1 289 aa14.34□□□□□ -0.11
CHMP1A-205ENST00000548650 CCT8L2Q96SF2 557 aa14.34□□□□□ -0.11
CHMP1A-205ENST00000548650 CHID1Q9BWS9 393 aa14.34□□□□□ -0.11
CHMP1A-205ENST00000548650 FGF23Q9GZV9 251 aaPredicted RBP14.34□□□□□ -0.11
CHMP1A-205ENST00000548650 OR51V1Q9H2C8 321 aa14.34□□□□□ -0.11
CHMP1A-205ENST00000548650 KLHDC2Q9Y2U9 406 aa14.34□□□□□ -0.11
CHMP1A-205ENST00000548650 KPTNQ9Y664 436 aa14.34□□□□□ -0.11
CHMP1A-205ENST00000548650 CDIPTO14735 213 aa14.33□□□□□ -0.12
CHMP1A-205ENST00000548650 CST1P01037 141 aa14.33□□□□□ -0.12
CHMP1A-205ENST00000548650 KNG1P01042 644 aa14.33□□□□□ -0.12
CHMP1A-205ENST00000548650 IGHV4-59P01825 116 aa14.33□□□□□ -0.12
CHMP1A-205ENST00000548650 LYNP07948 512 aa14.33□□□□□ -0.12
CHMP1A-205ENST00000548650 H2BFMP0C1H6 154 aa14.33□□□□□ -0.12
CHMP1A-205ENST00000548650 PSMA6P60900 246 aaKnown RBP14.33□□□□□ -0.12
CHMP1A-205ENST00000548650 IL5RAQ01344 420 aa14.33□□□□□ -0.12
CHMP1A-205ENST00000548650 SRSF4Q08170 494 aaKnown RBP14.33□□□□□ -0.12
CHMP1A-205ENST00000548650 VMO1Q7Z5L0 202 aa14.33□□□□□ -0.12
CHMP1A-205ENST00000548650 FTMTQ8N4E7 242 aa14.33□□□□□ -0.12
CHMP1A-205ENST00000548650 PIP4P2Q8N4L2 257 aa14.33□□□□□ -0.12
CHMP1A-205ENST00000548650 KIR3DL3Q8N743 410 aa14.33□□□□□ -0.12
CHMP1A-205ENST00000548650 LY6G5BQ8NDX9 201 aa14.33□□□□□ -0.12
CHMP1A-205ENST00000548650 HPSE2Q8WWQ2 592 aa14.33□□□□□ -0.12
CHMP1A-205ENST00000548650 LRGUKQ96M69 825 aa14.33□□□□□ -0.12
CHMP1A-205ENST00000548650 RTL8AQ9BWD3 113 aa14.33□□□□□ -0.12
CHMP1A-205ENST00000548650 BEX1Q9HBH7 125 aa14.33□□□□□ -0.12
CHMP1A-205ENST00000548650 A0A1B0GVI7 797 aa14.32□□□□□ -0.12
CHMP1A-205ENST00000548650 ANXA2P2A6NMY6 339 aa14.32□□□□□ -0.12
CHMP1A-205ENST00000548650 PRR23D1E9PI22 279 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms