RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 A6NIN4 97 aa11.68□□□□□ -0.54
PTCH1-215ENST00000547672 ORC5O43913 435 aa11.68□□□□□ -0.54
PTCH1-215ENST00000547672 KDM4BO94953 1096 aa11.68□□□□□ -0.54
PTCH1-215ENST00000547672 SFTPCP11686 197 aa11.68□□□□□ -0.54
PTCH1-215ENST00000547672 CBR1P16152 277 aa11.68□□□□□ -0.54
PTCH1-215ENST00000547672 FAHP16930 419 aa11.68□□□□□ -0.54
PTCH1-215ENST00000547672 RBP2P50120 134 aa11.68□□□□□ -0.54
PTCH1-215ENST00000547672 FAM3AP98173 230 aa11.68□□□□□ -0.54
PTCH1-215ENST00000547672 OR8B8Q15620 311 aa11.68□□□□□ -0.54
PTCH1-215ENST00000547672 GLIPR1L1Q6UWM5 242 aa11.68□□□□□ -0.54
PTCH1-215ENST00000547672 DNM1P46Q6ZS02 220 aa11.68□□□□□ -0.54
PTCH1-215ENST00000547672 FAM169BQ8N8A8 192 aa11.68□□□□□ -0.54
PTCH1-215ENST00000547672 C9orf106Q8NAJ2 232 aa11.68□□□□□ -0.54
PTCH1-215ENST00000547672 OR56B1Q8NGI3 324 aa11.68□□□□□ -0.54
PTCH1-215ENST00000547672 OR4D6Q8NGJ1 314 aa11.68□□□□□ -0.54
PTCH1-215ENST00000547672 TRIM63Q969Q1 353 aa11.68□□□□□ -0.54
PTCH1-215ENST00000547672 CREB3L1Q96BA8 519 aa11.68□□□□□ -0.54
PTCH1-215ENST00000547672 REPIN1Q9BWE0 567 aaKnown RBP11.68□□□□□ -0.54
PTCH1-215ENST00000547672 SFXN3Q9BWM7 321 aa11.68□□□□□ -0.54
PTCH1-215ENST00000547672 CDH20Q9HBT6 801 aa11.68□□□□□ -0.54
PTCH1-215ENST00000547672 ZNF224Q9NZL3 707 aa11.68□□□□□ -0.54
PTCH1-215ENST00000547672 AMDHD2Q9Y303 409 aa11.68□□□□□ -0.54
PTCH1-215ENST00000547672 RBMX2Q9Y388 322 aaKnown RBP11.68□□□□□ -0.54
PTCH1-215ENST00000547672 LOC100509620A0A075B734 347 aa11.67□□□□□ -0.54
PTCH1-215ENST00000547672 hCG_38984A0A1B0GV85 526 aa11.67□□□□□ -0.54
PTCH1-215ENST00000547672 PRSS44E7EML9 344 aa11.67□□□□□ -0.54
PTCH1-215ENST00000547672 H7C417 338 aa11.67□□□□□ -0.54
PTCH1-215ENST00000547672 GMDSO60547 372 aa11.67□□□□□ -0.54
PTCH1-215ENST00000547672 DHFRP00374 187 aa11.67□□□□□ -0.54
PTCH1-215ENST00000547672 PDGFAP04085 211 aa11.67□□□□□ -0.54
PTCH1-215ENST00000547672 SELEP16581 610 aa11.67□□□□□ -0.54
PTCH1-215ENST00000547672 COX5AP20674 150 aa11.67□□□□□ -0.54
PTCH1-215ENST00000547672 CCNOP22674 350 aa11.67□□□□□ -0.54
PTCH1-215ENST00000547672 IGHV1-2P23083 117 aa11.67□□□□□ -0.54
PTCH1-215ENST00000547672 GDNFP39905 211 aa11.67□□□□□ -0.54
PTCH1-215ENST00000547672 RFX2P48378 723 aa11.67□□□□□ -0.54
PTCH1-215ENST00000547672 RAG2P55895 527 aa11.67□□□□□ -0.54
PTCH1-215ENST00000547672 MTCP1P56278 107 aa11.67□□□□□ -0.54
PTCH1-215ENST00000547672 BTG1P62324 171 aa11.67□□□□□ -0.54
PTCH1-215ENST00000547672 DGCR2P98153 550 aa11.67□□□□□ -0.54
PTCH1-215ENST00000547672 PMPCAQ10713 525 aa11.67□□□□□ -0.54
PTCH1-215ENST00000547672 GABRA6Q16445 453 aa11.67□□□□□ -0.54
PTCH1-215ENST00000547672 SFRP5Q5T4F7 317 aa11.67□□□□□ -0.54
PTCH1-215ENST00000547672 TMEM42Q69YG0 159 aa11.67□□□□□ -0.54
PTCH1-215ENST00000547672 ZNF324BQ6AW86 544 aaPredicted RBP11.67□□□□□ -0.54
PTCH1-215ENST00000547672 PLXDC2Q6UX71 529 aa11.67□□□□□ -0.54
PTCH1-215ENST00000547672 ZNF554Q86TJ5 538 aa11.67□□□□□ -0.54
PTCH1-215ENST00000547672 GCNT2Q8N0V5 402 aa11.67□□□□□ -0.54
PTCH1-215ENST00000547672 GABRG1Q8N1C3 465 aa11.67□□□□□ -0.54
PTCH1-215ENST00000547672 SLC30A7Q8NEW0 376 aa11.67□□□□□ -0.54
PTCH1-215ENST00000547672 MRPS24Q96EL2 167 aaKnown RBP11.67□□□□□ -0.54
PTCH1-215ENST00000547672 BORCS8Q96FH0 119 aa11.67□□□□□ -0.54
PTCH1-215ENST00000547672 METTL9Q9H1A3 318 aa11.67□□□□□ -0.54
PTCH1-215ENST00000547672 PIGMQ9H3S5 423 aa11.67□□□□□ -0.54
PTCH1-215ENST00000547672 MTFP1Q9UDX5 166 aa11.67□□□□□ -0.54
PTCH1-215ENST00000547672 ING4Q9UNL4 249 aa11.67□□□□□ -0.54
PTCH1-215ENST00000547672 TMEM14DPA8MWL7 114 aa11.66□□□□□ -0.54
PTCH1-215ENST00000547672 CST4P01036 141 aa11.66□□□□□ -0.54
PTCH1-215ENST00000547672 LPLP06858 475 aa11.66□□□□□ -0.54
PTCH1-215ENST00000547672 GSTP1P09211 210 aaKnown RBP11.66□□□□□ -0.54
PTCH1-215ENST00000547672 CD3GP09693 182 aa11.66□□□□□ -0.54
PTCH1-215ENST00000547672 NAT2P11245 290 aa11.66□□□□□ -0.54
PTCH1-215ENST00000547672 SLC6A1P30531 599 aa11.66□□□□□ -0.54
PTCH1-215ENST00000547672 RCVRNP35243 200 aa11.66□□□□□ -0.54
PTCH1-215ENST00000547672 OPRM1P35372 400 aa11.66□□□□□ -0.54
PTCH1-215ENST00000547672 ZNF92Q03936 586 aa11.66□□□□□ -0.54
PTCH1-215ENST00000547672 PPA1Q15181 289 aa11.66□□□□□ -0.54
PTCH1-215ENST00000547672 UBE2V2Q15819 145 aa11.66□□□□□ -0.54
PTCH1-215ENST00000547672 HIKESHIQ53FT3 197 aa11.66□□□□□ -0.54
PTCH1-215ENST00000547672 RSBN1Q5VWQ0 802 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-215ENST00000547672 MDP1Q86V88 176 aa11.66□□□□□ -0.54
PTCH1-215ENST00000547672 DTX3Q8N9I9 347 aa11.66□□□□□ -0.54
PTCH1-215ENST00000547672 ZSCAN4Q8NAM6 433 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-215ENST00000547672 OR52I2Q8NH67 350 aa11.66□□□□□ -0.54
PTCH1-215ENST00000547672 SSC4DQ8WTU2 575 aa11.66□□□□□ -0.54
PTCH1-215ENST00000547672 CHAC2Q8WUX2 184 aa11.66□□□□□ -0.54
PTCH1-215ENST00000547672 EXTL1Q92935 676 aa11.66□□□□□ -0.54
PTCH1-215ENST00000547672 AUNIPQ9H7T9 357 aa11.66□□□□□ -0.54
PTCH1-215ENST00000547672 MPC1Q9Y5U8 109 aa11.66□□□□□ -0.54
PTCH1-215ENST00000547672 NUBP2Q9Y5Y2 271 aa11.66□□□□□ -0.54
PTCH1-215ENST00000547672 ARHGAP21Q5T5U3 1957 aa11.66□□□□□ -0.54
PTCH1-215ENST00000547672 IGKV1-9A0A0C4DH69 117 aa11.65□□□□□ -0.54
PTCH1-215ENST00000547672 ANKRD20A5PA0PJZ0 165 aa11.65□□□□□ -0.54
PTCH1-215ENST00000547672 ANKRD30BLA7E2S9 258 aa11.65□□□□□ -0.54
PTCH1-215ENST00000547672 E9PLN8 166 aa11.65□□□□□ -0.54
PTCH1-215ENST00000547672 TPD52L2O43399 206 aaKnown RBP11.65□□□□□ -0.54
PTCH1-215ENST00000547672 ICMTO60725 284 aa11.65□□□□□ -0.54
PTCH1-215ENST00000547672 CYB5AP00167 134 aa11.65□□□□□ -0.54
PTCH1-215ENST00000547672 CSTBP04080 98 aaKnown RBP11.65□□□□□ -0.54
PTCH1-215ENST00000547672 MELTFP08582 738 aa11.65□□□□□ -0.54
PTCH1-215ENST00000547672 TMEM225BP0DP42 221 aa11.65□□□□□ -0.54
PTCH1-215ENST00000547672 VSIG8P0DPA2 414 aa11.65□□□□□ -0.54
PTCH1-215ENST00000547672 RAD52P43351 418 aa11.65□□□□□ -0.54
PTCH1-215ENST00000547672 CBX5P45973 191 aa11.65□□□□□ -0.54
PTCH1-215ENST00000547672 QRFPP83859 136 aa11.65□□□□□ -0.54
PTCH1-215ENST00000547672 MADCAM1Q13477 382 aa11.65□□□□□ -0.54
PTCH1-215ENST00000547672 PNLIPRP3Q17RR3 467 aa11.65□□□□□ -0.54
PTCH1-215ENST00000547672 C3orf36Q3SXR2 165 aa11.65□□□□□ -0.54
PTCH1-215ENST00000547672 MOB3CQ70IA8 216 aa11.65□□□□□ -0.54
PTCH1-215ENST00000547672 IZUMO1Q8IYV9 350 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms