RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 SIRPDQ9H106 197 aa11.04□□□□□ -0.64
CPSF6-204ENST00000547486 C1orf21Q9H246 121 aa11.04□□□□□ -0.64
CPSF6-204ENST00000547486 TNFRSF19Q9NS68 423 aa11.04□□□□□ -0.64
CPSF6-204ENST00000547486 PDP1Q9P0J1 537 aaPredicted RBP11.04□□□□□ -0.64
CPSF6-204ENST00000547486 KLHDC2Q9Y2U9 406 aa11.04□□□□□ -0.64
CPSF6-204ENST00000547486 ARRDC5A6NEK1 342 aa11.03□□□□□ -0.64
CPSF6-204ENST00000547486 FAM181BA6NEQ2 426 aa11.03□□□□□ -0.64
CPSF6-204ENST00000547486 SRRM5B3KS81 715 aa11.03□□□□□ -0.64
CPSF6-204ENST00000547486 P2RY10O00398 339 aa11.03□□□□□ -0.64
CPSF6-204ENST00000547486 CDIPTO14735 213 aa11.03□□□□□ -0.64
CPSF6-204ENST00000547486 SELENOFO60613 162 aa11.03□□□□□ -0.64
CPSF6-204ENST00000547486 H2BFMP0C1H6 154 aa11.03□□□□□ -0.64
CPSF6-204ENST00000547486 AMY2BP19961 511 aa11.03□□□□□ -0.64
CPSF6-204ENST00000547486 ACKR3P25106 362 aa11.03□□□□□ -0.64
CPSF6-204ENST00000547486 HCCSP53701 268 aa11.03□□□□□ -0.64
CPSF6-204ENST00000547486 BPIFB3P59826 476 aa11.03□□□□□ -0.64
CPSF6-204ENST00000547486 ARF6P62330 175 aa11.03□□□□□ -0.64
CPSF6-204ENST00000547486 IL13RA1P78552 427 aa11.03□□□□□ -0.64
CPSF6-204ENST00000547486 CDK5Q00535 292 aa11.03□□□□□ -0.64
CPSF6-204ENST00000547486 MZT1Q08AG7 82 aa11.03□□□□□ -0.64
CPSF6-204ENST00000547486 GFOD2Q3B7J2 385 aa11.03□□□□□ -0.64
CPSF6-204ENST00000547486 WDR82Q6UXN9 313 aa11.03□□□□□ -0.64
CPSF6-204ENST00000547486 SHFQ7M4L6 423 aa11.03□□□□□ -0.64
CPSF6-204ENST00000547486 CPOQ8IVL8 374 aa11.03□□□□□ -0.64
CPSF6-204ENST00000547486 BBS1Q8NFJ9 593 aa11.03□□□□□ -0.64
CPSF6-204ENST00000547486 OR52H1Q8NGJ2 320 aa11.03□□□□□ -0.64
CPSF6-204ENST00000547486 OTOSQ8NHW6 89 aa11.03□□□□□ -0.64
CPSF6-204ENST00000547486 LYZL4Q96KX0 146 aa11.03□□□□□ -0.64
CPSF6-204ENST00000547486 FGF23Q9GZV9 251 aaPredicted RBP11.03□□□□□ -0.64
CPSF6-204ENST00000547486 OR10A2Q9H208 303 aa11.03□□□□□ -0.64
CPSF6-204ENST00000547486 RNPEPL1Q9HAU8 725 aa11.03□□□□□ -0.64
CPSF6-204ENST00000547486 TRIM36Q9NQ86 728 aa11.03□□□□□ -0.64
CPSF6-204ENST00000547486 KAAG1Q9UBP8 84 aa11.03□□□□□ -0.64
CPSF6-204ENST00000547486 POM121CA8CG34 1229 aa11.02□□□□□ -0.65
CPSF6-204ENST00000547486 PRR23D1E9PI22 279 aaPredicted RBP11.02□□□□□ -0.65
CPSF6-204ENST00000547486 GNGT2O14610 69 aa11.02□□□□□ -0.65
CPSF6-204ENST00000547486 WIPF1O43516 503 aa11.02□□□□□ -0.65
CPSF6-204ENST00000547486 APOC1P02654 83 aa11.02□□□□□ -0.65
CPSF6-204ENST00000547486 PRR23D2P0DMB1 279 aaPredicted RBP11.02□□□□□ -0.65
CPSF6-204ENST00000547486 RELBQ01201 579 aa11.02□□□□□ -0.65
CPSF6-204ENST00000547486 GK3PQ14409 553 aa11.02□□□□□ -0.65
CPSF6-204ENST00000547486 WDR38Q5JTN6 314 aa11.02□□□□□ -0.65
CPSF6-204ENST00000547486 TMEM236Q5W0B7 351 aa11.02□□□□□ -0.65
CPSF6-204ENST00000547486 GALNT4Q8N4A0 578 aa11.02□□□□□ -0.65
CPSF6-204ENST00000547486 PNLDC1Q8NA58 520 aaKnown RBP11.02□□□□□ -0.65
CPSF6-204ENST00000547486 THEM6Q8WUY1 208 aa11.02□□□□□ -0.65
CPSF6-204ENST00000547486 ST8SIA4Q92187 359 aa11.02□□□□□ -0.65
CPSF6-204ENST00000547486 LHX4Q969G2 390 aa11.02□□□□□ -0.65
CPSF6-204ENST00000547486 ITPKCQ96DU7 683 aa11.02□□□□□ -0.65
CPSF6-204ENST00000547486 PGAM5Q96HS1 289 aa11.02□□□□□ -0.65
CPSF6-204ENST00000547486 TLNRD1Q9H1K6 362 aa11.02□□□□□ -0.65
CPSF6-204ENST00000547486 ZNF696Q9H7X3 374 aa11.02□□□□□ -0.65
CPSF6-204ENST00000547486 SP140LQ9H930 580 aa11.02□□□□□ -0.65
CPSF6-204ENST00000547486 NOX4Q9NPH5 578 aa11.02□□□□□ -0.65
CPSF6-204ENST00000547486 TRRAPQ9Y4A5 3859 aa11.01□□□□□ -0.65
CPSF6-204ENST00000547486 DOCK11Q5JSL3 2073 aa11.01□□□□□ -0.65
CPSF6-204ENST00000547486 IGHV1-69DA0A0B4J2H0 117 aa11.01□□□□□ -0.65
CPSF6-204ENST00000547486 AQP12BA6NM10 295 aa11.01□□□□□ -0.65
CPSF6-204ENST00000547486 ZNF850A8MQ14 1090 aa11.01□□□□□ -0.65
CPSF6-204ENST00000547486 IGHV1-69P01742 117 aa11.01□□□□□ -0.65
CPSF6-204ENST00000547486 TFF1P04155 84 aa11.01□□□□□ -0.65
CPSF6-204ENST00000547486 LYNP07948 512 aa11.01□□□□□ -0.65
CPSF6-204ENST00000547486 MELTFP08582 738 aa11.01□□□□□ -0.65
CPSF6-204ENST00000547486 OSMP13725 252 aa11.01□□□□□ -0.65
CPSF6-204ENST00000547486 MUC1P15941 1255 aaPredicted RBP11.01□□□□□ -0.65
CPSF6-204ENST00000547486 PAICSP22234 425 aaKnown RBP11.01□□□□□ -0.65
CPSF6-204ENST00000547486 SLC2A5P22732 501 aa11.01□□□□□ -0.65
CPSF6-204ENST00000547486 CFL1P23528 166 aaKnown RBP11.01□□□□□ -0.65
CPSF6-204ENST00000547486 NAA10P41227 235 aaPredicted RBP11.01□□□□□ -0.65
CPSF6-204ENST00000547486 SRSF4Q08170 494 aaKnown RBP11.01□□□□□ -0.65
CPSF6-204ENST00000547486 MICBQ29980 383 aa11.01□□□□□ -0.65
CPSF6-204ENST00000547486 METTL11BQ5VVY1 283 aa11.01□□□□□ -0.65
CPSF6-204ENST00000547486 FIP1L1Q6UN15 594 aaKnown RBP11.01□□□□□ -0.65
CPSF6-204ENST00000547486 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.01□□□□□ -0.65
CPSF6-204ENST00000547486 AQP12AQ8IXF9 295 aa11.01□□□□□ -0.65
CPSF6-204ENST00000547486 PDZD9Q8IXQ8 264 aa11.01□□□□□ -0.65
CPSF6-204ENST00000547486 FAM216BQ8N7L0 139 aa11.01□□□□□ -0.65
CPSF6-204ENST00000547486 LY6G5BQ8NDX9 201 aa11.01□□□□□ -0.65
CPSF6-204ENST00000547486 OR5T2Q8NGG2 359 aa11.01□□□□□ -0.65
CPSF6-204ENST00000547486 GATAD2BQ8WXI9 593 aa11.01□□□□□ -0.65
CPSF6-204ENST00000547486 RPL3LQ92901 407 aaKnown RBP11.01□□□□□ -0.65
CPSF6-204ENST00000547486 PAPOLGQ9BWT3 736 aaKnown RBP11.01□□□□□ -0.65
CPSF6-204ENST00000547486 CHIAQ9BZP6 476 aa11.01□□□□□ -0.65
CPSF6-204ENST00000547486 WDR13Q9H1Z4 485 aa11.01□□□□□ -0.65
CPSF6-204ENST00000547486 CNTD2Q9H8S5 307 aa11.01□□□□□ -0.65
CPSF6-204ENST00000547486 RPUSD1Q9UJJ7 312 aaKnown RBP11.01□□□□□ -0.65
CPSF6-204ENST00000547486 PKD1L1Q8TDX9 2849 aa11.01□□□□□ -0.65
CPSF6-204ENST00000547486 A0A0U1RQK1 487 aa11□□□□□ -0.65
CPSF6-204ENST00000547486 TIPRLO75663 272 aa11□□□□□ -0.65
CPSF6-204ENST00000547486 ECDO95905 644 aaPredicted RBP11□□□□□ -0.65
CPSF6-204ENST00000547486 CST4P01036 141 aa11□□□□□ -0.65
CPSF6-204ENST00000547486 HMGN1P05114 100 aa11□□□□□ -0.65
CPSF6-204ENST00000547486 SELLP14151 372 aa11□□□□□ -0.65
CPSF6-204ENST00000547486 ALOX5APP20292 161 aa11□□□□□ -0.65
CPSF6-204ENST00000547486 GNALP38405 381 aa11□□□□□ -0.65
CPSF6-204ENST00000547486 TGM4P49221 684 aa11□□□□□ -0.65
CPSF6-204ENST00000547486 GMFBP60983 142 aa11□□□□□ -0.65
CPSF6-204ENST00000547486 PRDX4Q13162 271 aa11□□□□□ -0.65
CPSF6-204ENST00000547486 PDCD1Q15116 288 aa11□□□□□ -0.65
CPSF6-204ENST00000547486 FAM76BQ5HYJ3 339 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms