RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 LRRC30A6NM36 301 aa14.22□□□□□ -0.13
LTBR-215ENST00000546296 ANXA2P2A6NMY6 339 aa14.22□□□□□ -0.13
LTBR-215ENST00000546296 ZNF850A8MQ14 1090 aa14.22□□□□□ -0.13
LTBR-215ENST00000546296 IFNL4K9M1U5 179 aa14.22□□□□□ -0.13
LTBR-215ENST00000546296 CST4P01036 141 aa14.22□□□□□ -0.13
LTBR-215ENST00000546296 GRPP07492 148 aa14.22□□□□□ -0.13
LTBR-215ENST00000546296 CHN2P52757 468 aa14.22□□□□□ -0.13
LTBR-215ENST00000546296 GBX2P52951 348 aaPredicted RBP14.22□□□□□ -0.13
LTBR-215ENST00000546296 PRDX4Q13162 271 aa14.22□□□□□ -0.13
LTBR-215ENST00000546296 MAB21L1Q13394 359 aa14.22□□□□□ -0.13
LTBR-215ENST00000546296 WDR38Q5JTN6 314 aa14.22□□□□□ -0.13
LTBR-215ENST00000546296 AVPI1Q5T686 147 aa14.22□□□□□ -0.13
LTBR-215ENST00000546296 TMPRSS11AQ6ZMR5 421 aa14.22□□□□□ -0.13
LTBR-215ENST00000546296 DOK3Q7L591 496 aa14.22□□□□□ -0.13
LTBR-215ENST00000546296 EGFL6Q8IUX8 553 aa14.22□□□□□ -0.13
LTBR-215ENST00000546296 SYS1Q8N2H4 156 aa14.22□□□□□ -0.13
LTBR-215ENST00000546296 PRSS35Q8N3Z0 413 aa14.22□□□□□ -0.13
LTBR-215ENST00000546296 OR2G2Q8NGZ5 317 aa14.22□□□□□ -0.13
LTBR-215ENST00000546296 FBLIM1Q8WUP2 373 aa14.22□□□□□ -0.13
LTBR-215ENST00000546296 SMR3AQ99954 134 aa14.22□□□□□ -0.13
LTBR-215ENST00000546296 MICU1Q9BPX6 476 aa14.22□□□□□ -0.13
LTBR-215ENST00000546296 NARFLQ9H6Q4 476 aa14.22□□□□□ -0.13
LTBR-215ENST00000546296 ISG20L2Q9H9L3 353 aaKnown RBP14.22□□□□□ -0.13
LTBR-215ENST00000546296 ABCB9Q9NP78 766 aa14.22□□□□□ -0.13
LTBR-215ENST00000546296 UFSP2Q9NUQ7 469 aa14.22□□□□□ -0.13
LTBR-215ENST00000546296 DIMT1Q9UNQ2 313 aaKnown RBP14.22□□□□□ -0.13
LTBR-215ENST00000546296 PIGLQ9Y2B2 252 aa14.22□□□□□ -0.13
LTBR-215ENST00000546296 EXOSC1Q9Y3B2 195 aaKnown RBP14.22□□□□□ -0.13
LTBR-215ENST00000546296 MPC1Q9Y5U8 109 aa14.22□□□□□ -0.13
LTBR-215ENST00000546296 F8P00451 2351 aa14.21□□□□□ -0.13
LTBR-215ENST00000546296 LRP5LA4QPB2 252 aa14.21□□□□□ -0.13
LTBR-215ENST00000546296 H3BSH0 61 aa14.21□□□□□ -0.13
LTBR-215ENST00000546296 SYT7O43581 403 aa14.21□□□□□ -0.13
LTBR-215ENST00000546296 XPNPEP2O43895 674 aa14.21□□□□□ -0.13
LTBR-215ENST00000546296 DHRS3O75911 302 aa14.21□□□□□ -0.13
LTBR-215ENST00000546296 IGLV3-1P01715 115 aa14.21□□□□□ -0.13
LTBR-215ENST00000546296 LIMS3P0CW19 117 aa14.21□□□□□ -0.13
LTBR-215ENST00000546296 LIMS4P0CW20 117 aa14.21□□□□□ -0.13
LTBR-215ENST00000546296 IRF2P14316 349 aa14.21□□□□□ -0.13
LTBR-215ENST00000546296 ETV1P50549 477 aa14.21□□□□□ -0.13
LTBR-215ENST00000546296 CSNK2BP67870 215 aa14.21□□□□□ -0.13
LTBR-215ENST00000546296 ST3GAL4Q11206 333 aa14.21□□□□□ -0.13
LTBR-215ENST00000546296 C6orf141Q5SZD1 244 aa14.21□□□□□ -0.13
LTBR-215ENST00000546296 PRAMEF6Q5VXH4 476 aa14.21□□□□□ -0.13
LTBR-215ENST00000546296 LAIR2Q6ISS4 152 aa14.21□□□□□ -0.13
LTBR-215ENST00000546296 CLEC9AQ6UXN8 241 aa14.21□□□□□ -0.13
LTBR-215ENST00000546296 STX19Q8N4C7 294 aa14.21□□□□□ -0.13
LTBR-215ENST00000546296 OR11L1Q8NGX0 322 aa14.21□□□□□ -0.13
LTBR-215ENST00000546296 ZNF420Q8TAQ5 688 aaPredicted RBP14.21□□□□□ -0.13
LTBR-215ENST00000546296 PELI1Q96FA3 418 aa14.21□□□□□ -0.13
LTBR-215ENST00000546296 JAM3Q9BX67 310 aa14.21□□□□□ -0.13
LTBR-215ENST00000546296 FN3KRPQ9HA64 309 aa14.21□□□□□ -0.13
LTBR-215ENST00000546296 PLCXD1Q9NUJ7 323 aa14.21□□□□□ -0.13
LTBR-215ENST00000546296 CNOT2Q9NZN8 540 aaKnown RBP14.21□□□□□ -0.13
LTBR-215ENST00000546296 PSORS1C1Q9UIG5 152 aa14.21□□□□□ -0.13
LTBR-215ENST00000546296 ENPP5Q9UJA9 477 aa14.21□□□□□ -0.13
LTBR-215ENST00000546296 A0A096LNT2 108 aa14.2□□□□□ -0.14
LTBR-215ENST00000546296 A0A1B0GTI1 187 aa14.2□□□□□ -0.14
LTBR-215ENST00000546296 ISPDA4D126 451 aa14.2□□□□□ -0.14
LTBR-215ENST00000546296 UBCP0CG48 685 aaKnown RBP14.2□□□□□ -0.14
LTBR-215ENST00000546296 FAHP16930 419 aa14.2□□□□□ -0.14
LTBR-215ENST00000546296 MYF6P23409 242 aa14.2□□□□□ -0.14
LTBR-215ENST00000546296 KIR3DL2P43630 455 aa14.2□□□□□ -0.14
LTBR-215ENST00000546296 GATA4P43694 442 aa14.2□□□□□ -0.14
LTBR-215ENST00000546296 MRPL28Q13084 256 aaKnown RBP14.2□□□□□ -0.14
LTBR-215ENST00000546296 HNRNPA0Q13151 305 aaKnown RBP14.2□□□□□ -0.14
LTBR-215ENST00000546296 ZBTB37Q5TC79 503 aa14.2□□□□□ -0.14
LTBR-215ENST00000546296 FDX2Q6P4F2 183 aa14.2□□□□□ -0.14
LTBR-215ENST00000546296 KCTD8Q6ZWB6 473 aa14.2□□□□□ -0.14
LTBR-215ENST00000546296 AHSA2Q719I0 299 aa14.2□□□□□ -0.14
LTBR-215ENST00000546296 ZDHHC23Q8IYP9 409 aa14.2□□□□□ -0.14
LTBR-215ENST00000546296 RDH10Q8IZV5 341 aa14.2□□□□□ -0.14
LTBR-215ENST00000546296 KLHL36Q8N4N3 616 aa14.2□□□□□ -0.14
LTBR-215ENST00000546296 PLPP7Q8NBV4 271 aa14.2□□□□□ -0.14
LTBR-215ENST00000546296 HPS1Q92902 700 aa14.2□□□□□ -0.14
LTBR-215ENST00000546296 ERGIC1Q969X5 290 aa14.2□□□□□ -0.14
LTBR-215ENST00000546296 ZNF649Q9BS31 505 aa14.2□□□□□ -0.14
LTBR-215ENST00000546296 RTL8AQ9BWD3 113 aa14.2□□□□□ -0.14
LTBR-215ENST00000546296 GSX1Q9H4S2 264 aaPredicted RBP14.2□□□□□ -0.14
LTBR-215ENST00000546296 PPP1R3EQ9H7J1 279 aa14.2□□□□□ -0.14
LTBR-215ENST00000546296 DCAF16Q9NXF7 216 aa14.2□□□□□ -0.14
LTBR-215ENST00000546296 SCN3BQ9NY72 215 aa14.2□□□□□ -0.14
LTBR-215ENST00000546296 FRRS1LQ9P0K9 344 aa14.2□□□□□ -0.14
LTBR-215ENST00000546296 WIPI2Q9Y4P8 454 aa14.2□□□□□ -0.14
LTBR-215ENST00000546296 NPTNQ9Y639 398 aa14.2□□□□□ -0.14
LTBR-215ENST00000546296 ACANP16112 2415 aa14.2□□□□□ -0.14
LTBR-215ENST00000546296 LOC100289279A0A1B0GTE1 492 aa14.19□□□□□ -0.14
LTBR-215ENST00000546296 A6NLC8 198 aa14.19□□□□□ -0.14
LTBR-215ENST00000546296 PTGES3LE9PB15 166 aa14.19□□□□□ -0.14
LTBR-215ENST00000546296 TMEM178BH3BS89 294 aa14.19□□□□□ -0.14
LTBR-215ENST00000546296 LY6G6DO95868 133 aa14.19□□□□□ -0.14
LTBR-215ENST00000546296 HEXAP06865 529 aa14.19□□□□□ -0.14
LTBR-215ENST00000546296 PIPP12273 146 aaPredicted RBP14.19□□□□□ -0.14
LTBR-215ENST00000546296 ZNF12P17014 697 aa14.19□□□□□ -0.14
LTBR-215ENST00000546296 RBMXP38159 391 aaKnown RBP14.19□□□□□ -0.14
LTBR-215ENST00000546296 CCR9P51686 369 aa14.19□□□□□ -0.14
LTBR-215ENST00000546296 NANOS3P60323 173 aaKnown RBP14.19□□□□□ -0.14
LTBR-215ENST00000546296 ALKBH1Q13686 389 aaKnown RBP14.19□□□□□ -0.14
LTBR-215ENST00000546296 MPPED2Q15777 294 aa14.19□□□□□ -0.14
LTBR-215ENST00000546296 TMEM249Q2WGJ8 235 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms