RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 PHF1O43189 567 aaPredicted RBP4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 GATBO75879 557 aaKnown RBP4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 SULT1C4O75897 302 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 CYB5AP00167 134 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 CST4P01036 141 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 HLA-DPB1P04440 258 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 OR2T7P0C7T2 308 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 CFHR2P36980 270 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 PITPNBP48739 271 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 GSK3AP49840 483 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 DAPP51397 102 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 ALDH3A2P51648 485 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 CXCR4P61073 352 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 ACTA2P62736 377 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 GNG3P63215 75 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 ACTG2P63267 376 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 LCN2P80188 198 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 ROM1Q03395 351 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 MRPL28Q13084 256 aaKnown RBP4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 BLMHQ13867 455 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 ZMYND11Q15326 602 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 RSPO1Q2MKA7 263 aaPredicted RBP4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 KRTAP24-1Q3LI83 254 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 ZNF404Q494X3 552 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 LRRC10Q5BKY1 277 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 GLYATL3Q5SZD4 288 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 ZNF684Q5T5D7 378 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 BCL2L15Q5TBC7 163 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 LINC01590Q5TEZ4 76 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 SLX4IPQ5VYV7 408 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 HIST2H2BDQ6DRA6 164 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 ZNF322Q6U7Q0 402 aaPredicted RBP4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 FIP1L1Q6UN15 594 aaKnown RBP4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 Q6ZR03 302 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 C1QL2Q7Z5L3 287 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 LSRQ86X29 649 aaPredicted RBP4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 ZNF573Q86YE8 665 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 ZDHHC23Q8IYP9 409 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 GALNT4Q8N4A0 578 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 TCEANCQ8N8B7 351 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 ZNF555Q8NEP9 628 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 OR56B2PQ8NGI1 322 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 OR10Z1Q8NGY1 313 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 OR2T27Q8NH04 317 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 TBC1D15Q8TC07 691 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 RAB40AQ8WXH6 277 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 EME1Q96AY2 570 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 C10orf35Q96D05 121 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 CPNE2Q96FN4 548 aaPredicted RBP4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 MS4A7Q9GZW8 240 aaPredicted RBP4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 GABARAPL1Q9H0R8 117 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 DNTTIP1Q9H147 329 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 RIBC2Q9H4K1 309 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 MED20Q9H944 212 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 BRD7Q9NPI1 651 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 UFSP2Q9NUQ7 469 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 C1orf123Q9NWV4 160 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 VNN3Q9NY84 501 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 RASL12Q9NYN1 266 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 GLS2Q9UI32 602 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 OAZ3Q9UMX2 235 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 SLC7A11Q9UPY5 501 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 POLDIP2Q9Y2S7 368 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 CAB39Q9Y376 341 aaPredicted RBP4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 CR1P17927 2039 aa4.72□□□□□ -1.65
CLSTN3-215ENST00000544584 MALRD1Q5VYJ5 2156 aa4.71□□□□□ -1.65
CLSTN3-215ENST00000544584 KMT2CQ8NEZ4 4911 aaKnown RBP4.71□□□□□ -1.66
CLSTN3-215ENST00000544584 A0A1B0GVI7 797 aa4.71□□□□□ -1.66
CLSTN3-215ENST00000544584 METTL15A6NJ78 407 aa4.71□□□□□ -1.66
CLSTN3-215ENST00000544584 OR5B21A6NL26 309 aa4.71□□□□□ -1.66
CLSTN3-215ENST00000544584 ZAR1LA6NP61 321 aa4.71□□□□□ -1.66
CLSTN3-215ENST00000544584 CEACAM18A8MTB9 384 aa4.71□□□□□ -1.66
CLSTN3-215ENST00000544584 A8MXK9 166 aa4.71□□□□□ -1.66
CLSTN3-215ENST00000544584 FAM157AC9JC47 383 aa4.71□□□□□ -1.66
CLSTN3-215ENST00000544584 LOC110117498-PIK3R3F6TDL0 507 aa4.71□□□□□ -1.66
CLSTN3-215ENST00000544584 FADS2O95864 444 aaKnown RBP4.71□□□□□ -1.66
CLSTN3-215ENST00000544584 NRASP01111 189 aa4.71□□□□□ -1.66
CLSTN3-215ENST00000544584 GRPP07492 148 aa4.71□□□□□ -1.66
CLSTN3-215ENST00000544584 WNT2P09544 360 aa4.71□□□□□ -1.66
CLSTN3-215ENST00000544584 CLUP10909 449 aa4.71□□□□□ -1.66
CLSTN3-215ENST00000544584 SLC2A1P11166 492 aa4.71□□□□□ -1.66
CLSTN3-215ENST00000544584 ADRA2CP18825 462 aa4.71□□□□□ -1.66
CLSTN3-215ENST00000544584 ALOX5APP20292 161 aa4.71□□□□□ -1.66
CLSTN3-215ENST00000544584 EPHA1P21709 976 aa4.71□□□□□ -1.66
CLSTN3-215ENST00000544584 HTR1FP30939 366 aa4.71□□□□□ -1.66
CLSTN3-215ENST00000544584 IL2RGP31785 369 aa4.71□□□□□ -1.66
CLSTN3-215ENST00000544584 RPS27P42677 84 aaKnown RBP4.71□□□□□ -1.66
CLSTN3-215ENST00000544584 ACTG1P63261 375 aa4.71□□□□□ -1.66
CLSTN3-215ENST00000544584 FAM3AP98173 230 aa4.71□□□□□ -1.66
CLSTN3-215ENST00000544584 ZNF154Q13106 437 aa4.71□□□□□ -1.66
CLSTN3-215ENST00000544584 SNAI3Q3KNW1 292 aa4.71□□□□□ -1.66
CLSTN3-215ENST00000544584 CEACAM21Q3KPI0 293 aa4.71□□□□□ -1.66
CLSTN3-215ENST00000544584 PDLIM3Q53GG5 364 aaPredicted RBP4.71□□□□□ -1.66
CLSTN3-215ENST00000544584 SLC25A30Q5SVS4 291 aa4.71□□□□□ -1.66
CLSTN3-215ENST00000544584 CLVS2Q5SYC1 327 aa4.71□□□□□ -1.66
CLSTN3-215ENST00000544584 GPR157Q5UAW9 335 aa4.71□□□□□ -1.66
CLSTN3-215ENST00000544584 METTL11BQ5VVY1 283 aa4.71□□□□□ -1.66
CLSTN3-215ENST00000544584 ZBTB49Q6ZSB9 765 aa4.71□□□□□ -1.66
CLSTN3-215ENST00000544584 ASRGL1Q7L266 308 aa4.71□□□□□ -1.66
CLSTN3-215ENST00000544584 DOK3Q7L591 496 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms