RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 ZNF816-ZNF321PA0A0X1KG74 233 aa26.23■■□□□ 1.79
CCM2-219ENST00000544363 HCKP08631 526 aa26.23■■□□□ 1.79
CCM2-219ENST00000544363 OCMP0CE72 109 aaPredicted RBP26.23■■□□□ 1.79
CCM2-219ENST00000544363 FAM157BP0CG42 384 aa26.23■■□□□ 1.79
CCM2-219ENST00000544363 PRF1P14222 555 aa26.23■■□□□ 1.79
CCM2-219ENST00000544363 CD40LGP29965 261 aa26.23■■□□□ 1.79
CCM2-219ENST00000544363 PPP1CBP62140 327 aa26.23■■□□□ 1.79
CCM2-219ENST00000544363 GPR173Q9NS66 373 aa26.23■■□□□ 1.79
CCM2-219ENST00000544363 CYSLTR2Q9NS75 346 aa26.23■■□□□ 1.79
CCM2-219ENST00000544363 RHBDD3Q9Y3P4 386 aa26.23■■□□□ 1.79
CCM2-219ENST00000544363 GGT3PA6NGU5 568 aa26.22■■□□□ 1.79
CCM2-219ENST00000544363 ATXN7O15265 892 aaPredicted RBP26.22■■□□□ 1.79
CCM2-219ENST00000544363 GMDSO60547 372 aa26.22■■□□□ 1.79
CCM2-219ENST00000544363 APOA1P02647 267 aa26.22■■□□□ 1.79
CCM2-219ENST00000544363 CHRNB4P30926 498 aa26.22■■□□□ 1.79
CCM2-219ENST00000544363 ZNF93P35789 620 aaPredicted RBP26.22■■□□□ 1.79
CCM2-219ENST00000544363 ZNF83P51522 516 aa26.22■■□□□ 1.79
CCM2-219ENST00000544363 FJX1Q86VR8 437 aa26.22■■□□□ 1.79
CCM2-219ENST00000544363 OR56B2PQ8NGI1 322 aa26.22■■□□□ 1.79
CCM2-219ENST00000544363 SSC4DQ8WTU2 575 aa26.22■■□□□ 1.79
CCM2-219ENST00000544363 FAM3DQ96BQ1 224 aa26.22■■□□□ 1.79
CCM2-219ENST00000544363 CNTD2Q9H8S5 307 aa26.22■■□□□ 1.79
CCM2-219ENST00000544363 FABP12A6NFH5 140 aa26.21■■□□□ 1.79
CCM2-219ENST00000544363 UBE2NLQ5JXB2 153 aa26.21■■□□□ 1.79
CCM2-219ENST00000544363 OR51D1Q8NGF3 324 aa26.21■■□□□ 1.79
CCM2-219ENST00000544363 NPAP1Q9NZP6 1156 aa26.21■■□□□ 1.79
CCM2-219ENST00000544363 KCNN3Q9UGI6 736 aa26.21■■□□□ 1.79
CCM2-219ENST00000544363 COL6A6A6NMZ7 2263 aa26.21■■□□□ 1.79
CCM2-219ENST00000544363 IGHV2OR16-5A0A0B4J2B6 119 aa26.21■■□□□ 1.79
CCM2-219ENST00000544363 NRASP01111 189 aa26.21■■□□□ 1.79
CCM2-219ENST00000544363 AZGP1P25311 298 aaKnown RBP26.21■■□□□ 1.79
CCM2-219ENST00000544363 ADORA2A-AS1P86434 159 aa26.21■■□□□ 1.79
CCM2-219ENST00000544363 ALKBH2Q6NS38 261 aa26.21■■□□□ 1.79
CCM2-219ENST00000544363 METAP1DQ6UB28 335 aaPredicted RBP26.21■■□□□ 1.79
CCM2-219ENST00000544363 FAM131AQ6UXB0 335 aa26.21■■□□□ 1.79
CCM2-219ENST00000544363 UNQ6126/PRO20091Q6UXV3 157 aa26.21■■□□□ 1.79
CCM2-219ENST00000544363 CSNK2A3Q8NEV1 391 aa26.21■■□□□ 1.79
CCM2-219ENST00000544363 OR4D6Q8NGJ1 314 aa26.21■■□□□ 1.79
CCM2-219ENST00000544363 SPACA5Q96QH8 159 aa26.21■■□□□ 1.79
CCM2-219ENST00000544363 SOSTQ9BQB4 213 aa26.21■■□□□ 1.79
CCM2-219ENST00000544363 COQ3Q9NZJ6 369 aa26.21■■□□□ 1.79
CCM2-219ENST00000544363 PCNX1Q96RV3 2341 aa26.2■■□□□ 1.79
CCM2-219ENST00000544363 PRR14LQ5THK1 2151 aa26.2■■□□□ 1.79
CCM2-219ENST00000544363 M0R1B8 84 aa26.2■■□□□ 1.78
CCM2-219ENST00000544363 ASCL1P50553 236 aa26.2■■□□□ 1.78
CCM2-219ENST00000544363 NAAAQ02083 359 aa26.2■■□□□ 1.78
CCM2-219ENST00000544363 CNN3Q15417 329 aaKnown RBP26.2■■□□□ 1.78
CCM2-219ENST00000544363 C2orf76Q3KRA6 126 aa26.2■■□□□ 1.78
CCM2-219ENST00000544363 DMRTC1Q5HYR2 192 aa26.2■■□□□ 1.78
CCM2-219ENST00000544363 FBXW12Q6X9E4 464 aa26.2■■□□□ 1.78
CCM2-219ENST00000544363 C22orf34Q6ZV56 151 aa26.2■■□□□ 1.78
CCM2-219ENST00000544363 KRT74Q7RTS7 529 aa26.2■■□□□ 1.78
CCM2-219ENST00000544363 UBASH3BQ8TF42 649 aa26.2■■□□□ 1.78
CCM2-219ENST00000544363 CCDC120Q96HB5 630 aa26.2■■□□□ 1.78
CCM2-219ENST00000544363 EXTL2Q9UBQ6 330 aa26.2■■□□□ 1.78
CCM2-219ENST00000544363 LOC100289279A0A1B0GTE1 492 aa26.19■■□□□ 1.78
CCM2-219ENST00000544363 RAD52P43351 418 aa26.19■■□□□ 1.78
CCM2-219ENST00000544363 POU3F4P49335 361 aa26.19■■□□□ 1.78
CCM2-219ENST00000544363 RIN1Q13671 783 aa26.19■■□□□ 1.78
CCM2-219ENST00000544363 SPATA46Q5T0L3 261 aa26.19■■□□□ 1.78
CCM2-219ENST00000544363 RNF144BQ7Z419 303 aa26.19■■□□□ 1.78
CCM2-219ENST00000544363 OR1J1Q8NGS3 322 aa26.19■■□□□ 1.78
CCM2-219ENST00000544363 NPRL2Q8WTW4 380 aa26.19■■□□□ 1.78
CCM2-219ENST00000544363 PIGCQ92535 297 aa26.19■■□□□ 1.78
CCM2-219ENST00000544363 PIGTQ969N2 578 aa26.19■■□□□ 1.78
CCM2-219ENST00000544363 SPSB1Q96BD6 273 aa26.19■■□□□ 1.78
CCM2-219ENST00000544363 USP24Q9UPU5 2620 aa26.19■■□□□ 1.78
CCM2-219ENST00000544363 CD300LBA8K4G0 201 aa26.18■■□□□ 1.78
CCM2-219ENST00000544363 CALCRP30988 508 aa26.18■■□□□ 1.78
CCM2-219ENST00000544363 TALDO1P37837 337 aa26.18■■□□□ 1.78
CCM2-219ENST00000544363 SLC25A38Q96DW6 304 aa26.18■■□□□ 1.78
CCM2-219ENST00000544363 TECTBQ96PL2 329 aa26.18■■□□□ 1.78
CCM2-219ENST00000544363 OR2J1Q9GZK6 312 aa26.18■■□□□ 1.78
CCM2-219ENST00000544363 NEK6Q9HC98 313 aa26.18■■□□□ 1.78
CCM2-219ENST00000544363 ARSBP15848 533 aa26.17■■□□□ 1.78
CCM2-219ENST00000544363 PRKACBP22694 351 aa26.17■■□□□ 1.78
CCM2-219ENST00000544363 TUBG1P23258 451 aa26.17■■□□□ 1.78
CCM2-219ENST00000544363 CAPZA1P52907 286 aa26.17■■□□□ 1.78
CCM2-219ENST00000544363 KISS1Q15726 138 aa26.17■■□□□ 1.78
CCM2-219ENST00000544363 ZNF79Q15937 498 aa26.17■■□□□ 1.78
CCM2-219ENST00000544363 C16orf87Q6PH81 154 aa26.17■■□□□ 1.78
CCM2-219ENST00000544363 SEZ6L2Q6UXD5 910 aa26.17■■□□□ 1.78
CCM2-219ENST00000544363 SSX8Q7RTT4 187 aa26.17■■□□□ 1.78
CCM2-219ENST00000544363 OR4M1Q8NGD0 313 aa26.17■■□□□ 1.78
CCM2-219ENST00000544363 SLC25A40Q8TBP6 338 aa26.17■■□□□ 1.78
CCM2-219ENST00000544363 BCL2L14Q9BZR8 327 aa26.17■■□□□ 1.78
CCM2-219ENST00000544363 PALMDQ9NP74 551 aa26.17■■□□□ 1.78
CCM2-219ENST00000544363 TUBG2Q9NRH3 451 aa26.17■■□□□ 1.78
CCM2-219ENST00000544363 A0A1B0GUH1 482 aa26.17■■□□□ 1.78
CCM2-219ENST00000544363 CST4P01036 141 aa26.17■■□□□ 1.78
CCM2-219ENST00000544363 PTBP1P26599 531 aaKnown RBP eCLIP26.17■■□□□ 1.789e-9■■■■■ 35.7
CCM2-219ENST00000544363 ERVS71-1P61550 626 aa26.17■■□□□ 1.78
CCM2-219ENST00000544363 MOB3CQ70IA8 216 aa26.17■■□□□ 1.78
CCM2-219ENST00000544363 CMTM4Q8IZR5 234 aa26.17■■□□□ 1.78
CCM2-219ENST00000544363 FTMTQ8N4E7 242 aa26.17■■□□□ 1.78
CCM2-219ENST00000544363 CMBLQ96DG6 245 aa26.17■■□□□ 1.78
CCM2-219ENST00000544363 GPER1Q99527 375 aa26.17■■□□□ 1.78
CCM2-219ENST00000544363 ABCG5Q9H222 651 aa26.17■■□□□ 1.78
CCM2-219ENST00000544363 PPP1R3EQ9H7J1 279 aa26.17■■□□□ 1.78
CCM2-219ENST00000544363 RANBP1P43487 201 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms