RNA–Protein interactions for RNA: ENST00000544301.6

VIM-209, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best)

Gene VIM, Length 2,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-209ENST00000544301 C1QL2Q7Z5L3 287 aa15.81■□□□□ 0.12
VIM-209ENST00000544301 ADAD2Q8NCV1 583 aaKnown RBP15.81■□□□□ 0.12
VIM-209ENST00000544301 NPRL2Q8WTW4 380 aa15.81■□□□□ 0.12
VIM-209ENST00000544301 ARHGAP5-AS1Q96IT6 56 aa15.81■□□□□ 0.12
VIM-209ENST00000544301 URM1Q9BTM9 101 aaKnown RBP15.81■□□□□ 0.12
VIM-209ENST00000544301 OR5H14A6NHG9 310 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 M0R135 149 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 MFNGO00587 321 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 CCSO14618 274 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 ICAM2P13598 275 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 FAHP16930 419 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 CALCRP30988 508 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 MRPS34P82930 218 aaKnown RBP15.8■□□□□ 0.12
VIM-209ENST00000544301 PNLIPRP3Q17RR3 467 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 MICBQ29980 383 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 FAM27BQ5VT28 67 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 FAHD2BQ6P2I3 314 aaPredicted RBP15.8■□□□□ 0.12
VIM-209ENST00000544301 ALKAL2Q6UX46 152 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 Q6ZSR3 168 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 PNLDC1Q8NA58 520 aaKnown RBP15.8■□□□□ 0.12
VIM-209ENST00000544301 OR5D18Q8NGL1 313 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 OR14L1PQ8NHC6 308 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 MITD1Q8WV92 249 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 ZNF799Q96GE5 643 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 FAHD2AQ96GK7 314 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 OR10A2Q9H208 303 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 PLEK2Q9NYT0 353 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 FLVCR1Q9Y5Y0 555 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 EFSO43281 561 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 CRYZL1O95825 349 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 NAT2P11245 290 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 ZNF250P15622 560 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 HLA-GP17693 338 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 TCN2P20062 427 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 ALDH3B1P43353 468 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 RPS27AP62979 156 aaKnown RBP15.8■□□□□ 0.12
VIM-209ENST00000544301 IL13RA1P78552 427 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 FGL1Q08830 312 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 GK2Q14410 553 aaPredicted RBP15.8■□□□□ 0.12
VIM-209ENST00000544301 ZNF546Q86UE3 836 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 GGNQ86UU5 652 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 HOGA1Q86XE5 327 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 FAM89BQ8N5H3 189 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 SCARB1Q8WTV0 552 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 KCNE4Q8WWG9 221 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 PP6455Q8WZ26 134 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 ST8SIA4Q92187 359 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 OCSTAMPQ9BR26 566 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 GHRLQ9UBU3 117 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 PIGLQ9Y2B2 252 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 LOXL2Q9Y4K0 774 aa15.8■□□□□ 0.12
VIM-209ENST00000544301 COL27A1Q8IZC6 1860 aaPredicted RBP15.8■□□□□ 0.12
VIM-209ENST00000544301 APOC1P02654 83 aa15.79■□□□□ 0.12
VIM-209ENST00000544301 RFPL3SP0C7P2 107 aa15.79■□□□□ 0.12
VIM-209ENST00000544301 HOXD11P31277 338 aaPredicted RBP15.79■□□□□ 0.12
VIM-209ENST00000544301 NTF4P34130 210 aa15.79■□□□□ 0.12
VIM-209ENST00000544301 CARD18P57730 90 aa15.79■□□□□ 0.12
VIM-209ENST00000544301 RSPO4Q2I0M5 234 aaPredicted RBP15.79■□□□□ 0.12
VIM-209ENST00000544301 TMEM65Q6PI78 240 aa15.79■□□□□ 0.12
VIM-209ENST00000544301 C6orf15Q6UXA7 325 aaPredicted RBP15.79■□□□□ 0.12
VIM-209ENST00000544301 TIPARPQ7Z3E1 657 aaKnown RBP15.79■□□□□ 0.12
VIM-209ENST00000544301 OR51T1Q8NGJ9 327 aa15.79■□□□□ 0.12
VIM-209ENST00000544301 OR6K3Q8NGY3 331 aa15.79■□□□□ 0.12
VIM-209ENST00000544301 MARCH1Q8TCQ1 289 aa15.79■□□□□ 0.12
VIM-209ENST00000544301 CT55Q8WUE5 264 aa15.79■□□□□ 0.12
VIM-209ENST00000544301 SPTSSAQ969W0 71 aa15.79■□□□□ 0.12
VIM-209ENST00000544301 WBP1Q96G27 269 aa15.79■□□□□ 0.12
VIM-209ENST00000544301 CHST5Q9GZS9 411 aa15.79■□□□□ 0.12
VIM-209ENST00000544301 STMND1H3BQB6 276 aa15.79■□□□□ 0.12
VIM-209ENST00000544301 HPP00738 406 aa15.79■□□□□ 0.12
VIM-209ENST00000544301 AKR1C4P17516 323 aa15.79■□□□□ 0.12
VIM-209ENST00000544301 MPGP29372 298 aa15.79■□□□□ 0.12
VIM-209ENST00000544301 AGTR1P30556 359 aa15.79■□□□□ 0.12
VIM-209ENST00000544301 VAX1Q5SQQ9 334 aa15.79■□□□□ 0.12
VIM-209ENST00000544301 H3F3CQ6NXT2 135 aa15.79■□□□□ 0.12
VIM-209ENST00000544301 SLC39A7Q92504 469 aa15.79■□□□□ 0.12
VIM-209ENST00000544301 FBXW5Q969U6 566 aa15.79■□□□□ 0.12
VIM-209ENST00000544301 SEC22AQ96IW7 307 aa15.79■□□□□ 0.12
VIM-209ENST00000544301 PHB2Q99623 299 aa15.79■□□□□ 0.12
VIM-209ENST00000544301 PDCD10Q9BUL8 212 aa15.79■□□□□ 0.12
VIM-209ENST00000544301 RYDENQ9NUL5 291 aaKnown RBP15.79■□□□□ 0.12
VIM-209ENST00000544301 RDH8Q9NYR8 311 aa15.79■□□□□ 0.12
VIM-209ENST00000544301 MUC3AQ02505 3323 aa15.78■□□□□ 0.12
VIM-209ENST00000544301 PMS2P1A4D2B8 440 aa15.78■□□□□ 0.12
VIM-209ENST00000544301 LRRC3CA6NJW4 275 aa15.78■□□□□ 0.12
VIM-209ENST00000544301 FOXI3A8MTJ6 420 aaPredicted RBP15.78■□□□□ 0.12
VIM-209ENST00000544301 NMBP08949 121 aa15.78■□□□□ 0.12
VIM-209ENST00000544301 SIGLEC14Q08ET2 396 aa15.78■□□□□ 0.12
VIM-209ENST00000544301 SNAI3Q3KNW1 292 aa15.78■□□□□ 0.12
VIM-209ENST00000544301 ACTBL2Q562R1 376 aa15.78■□□□□ 0.12
VIM-209ENST00000544301 ACER2Q5QJU3 275 aa15.78■□□□□ 0.12
VIM-209ENST00000544301 ZNF660Q6AZW8 331 aaPredicted RBP15.78■□□□□ 0.12
VIM-209ENST00000544301 TCEAL6Q6IPX3 200 aa15.78■□□□□ 0.12
VIM-209ENST00000544301 DEFB123Q8N688 67 aa15.78■□□□□ 0.12
VIM-209ENST00000544301 TERB2Q8NHR7 220 aa15.78■□□□□ 0.12
VIM-209ENST00000544301 COQ8AQ8NI60 647 aa15.78■□□□□ 0.12
VIM-209ENST00000544301 TCEAL3Q969E4 200 aa15.78■□□□□ 0.12
VIM-209ENST00000544301 PCDHGA1Q9Y5H4 931 aa15.78■□□□□ 0.12
VIM-209ENST00000544301 NCKAP5O14513 1909 aa15.78■□□□□ 0.12
VIM-209ENST00000544301 CCDC187A0A096LP49 1063 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 298.9 ms