RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 CD99P14209 185 aa12.76□□□□□ -0.37
CD9-210ENST00000543916 ATP6V1B1P15313 513 aa12.76□□□□□ -0.37
CD9-210ENST00000543916 SLC25A16P16260 332 aa12.76□□□□□ -0.37
CD9-210ENST00000543916 FAHP16930 419 aa12.76□□□□□ -0.37
CD9-210ENST00000543916 TNFRSF1AP19438 455 aa12.76□□□□□ -0.37
CD9-210ENST00000543916 CCL1P22362 96 aa12.76□□□□□ -0.37
CD9-210ENST00000543916 CD200P41217 278 aa12.76□□□□□ -0.37
CD9-210ENST00000543916 SRP9P49458 86 aaKnown RBP12.76□□□□□ -0.37
CD9-210ENST00000543916 OR2G6Q5TZ20 316 aa12.76□□□□□ -0.37
CD9-210ENST00000543916 Q6ZSR3 168 aa12.76□□□□□ -0.37
CD9-210ENST00000543916 ZNF540Q8NDQ6 660 aa12.76□□□□□ -0.37
CD9-210ENST00000543916 SEMA6DQ8NFY4 1073 aa12.76□□□□□ -0.37
CD9-210ENST00000543916 SGCDQ92629 289 aa12.76□□□□□ -0.37
CD9-210ENST00000543916 COX4I2Q96KJ9 171 aa12.76□□□□□ -0.37
CD9-210ENST00000543916 MYCBPQ99417 103 aaPredicted RBP12.76□□□□□ -0.37
CD9-210ENST00000543916 PAPOLGQ9BWT3 736 aaKnown RBP12.76□□□□□ -0.37
CD9-210ENST00000543916 CAB39Q9Y376 341 aaPredicted RBP12.76□□□□□ -0.37
CD9-210ENST00000543916 NOP16Q9Y3C1 178 aaKnown RBP12.76□□□□□ -0.37
CD9-210ENST00000543916 V9GYS6 101 aa12.76□□□□□ -0.37
CD9-210ENST00000543916 ZNF816-ZNF321PA0A0X1KG74 233 aa12.75□□□□□ -0.37
CD9-210ENST00000543916 LOC100289279A0A1B0GTE1 492 aa12.75□□□□□ -0.37
CD9-210ENST00000543916 LOC107986453A0A1B0GWG9 222 aa12.75□□□□□ -0.37
CD9-210ENST00000543916 ZNF850A8MQ14 1090 aa12.75□□□□□ -0.37
CD9-210ENST00000543916 SMAD7O15105 426 aaKnown RBP12.75□□□□□ -0.37
CD9-210ENST00000543916 LMX1BO60663 402 aa12.75□□□□□ -0.37
CD9-210ENST00000543916 CST4P01036 141 aa12.75□□□□□ -0.37
CD9-210ENST00000543916 UBCP0CG48 685 aaKnown RBP12.75□□□□□ -0.37
CD9-210ENST00000543916 MYL12AP19105 171 aa12.75□□□□□ -0.37
CD9-210ENST00000543916 C21orf33P30042 268 aaPredicted RBP12.75□□□□□ -0.37
CD9-210ENST00000543916 GNALP38405 381 aa12.75□□□□□ -0.37
CD9-210ENST00000543916 CCR9P51686 369 aa12.75□□□□□ -0.37
CD9-210ENST00000543916 PRDX4Q13162 271 aa12.75□□□□□ -0.37
CD9-210ENST00000543916 ALKBH1Q13686 389 aaKnown RBP12.75□□□□□ -0.37
CD9-210ENST00000543916 SNCBQ16143 134 aa12.75□□□□□ -0.37
CD9-210ENST00000543916 HFEQ30201 348 aa12.75□□□□□ -0.37
CD9-210ENST00000543916 PRAMEF6Q5VXH4 476 aa12.75□□□□□ -0.37
CD9-210ENST00000543916 XAF1Q6GPH4 301 aa12.75□□□□□ -0.37
CD9-210ENST00000543916 DOK3Q7L591 496 aa12.75□□□□□ -0.37
CD9-210ENST00000543916 KRT74Q7RTS7 529 aa12.75□□□□□ -0.37
CD9-210ENST00000543916 KLBQ86Z14 1044 aa12.75□□□□□ -0.37
CD9-210ENST00000543916 EGFL6Q8IUX8 553 aa12.75□□□□□ -0.37
CD9-210ENST00000543916 RDH10Q8IZV5 341 aa12.75□□□□□ -0.37
CD9-210ENST00000543916 STX19Q8N4C7 294 aa12.75□□□□□ -0.37
CD9-210ENST00000543916 KLHL36Q8N4N3 616 aa12.75□□□□□ -0.37
CD9-210ENST00000543916 CELF2-AS1Q8N7Q2 184 aa12.75□□□□□ -0.37
CD9-210ENST00000543916 OR14K1Q8NGZ2 314 aa12.75□□□□□ -0.37
CD9-210ENST00000543916 ZNF420Q8TAQ5 688 aaPredicted RBP12.75□□□□□ -0.37
CD9-210ENST00000543916 CCL17Q92583 94 aa12.75□□□□□ -0.37
CD9-210ENST00000543916 GCM1Q9NP62 436 aa12.75□□□□□ -0.37
CD9-210ENST00000543916 PPP1R3CQ9UQK1 317 aa12.75□□□□□ -0.37
CD9-210ENST00000543916 PIGLQ9Y2B2 252 aa12.75□□□□□ -0.37
CD9-210ENST00000543916 IGHV4-61A0A0C4DH41 118 aa12.74□□□□□ -0.37
CD9-210ENST00000543916 A0A1B0GVI7 797 aa12.74□□□□□ -0.37
CD9-210ENST00000543916 OR4C45A6NMZ5 311 aa12.74□□□□□ -0.37
CD9-210ENST00000543916 PTGES3LE9PB15 166 aa12.74□□□□□ -0.37
CD9-210ENST00000543916 PPIHO43447 177 aaKnown RBP12.74□□□□□ -0.37
CD9-210ENST00000543916 MTRF1O75570 445 aaKnown RBP12.74□□□□□ -0.37
CD9-210ENST00000543916 CDK1P06493 297 aa12.74□□□□□ -0.37
CD9-210ENST00000543916 PMELP40967 661 aa12.74□□□□□ -0.37
CD9-210ENST00000543916 GATA4P43694 442 aa12.74□□□□□ -0.37
CD9-210ENST00000543916 GPR6P46095 362 aaPredicted RBP12.74□□□□□ -0.37
CD9-210ENST00000543916 GTF2A1P52655 376 aaPredicted RBP12.74□□□□□ -0.37
CD9-210ENST00000543916 GBX2P52951 348 aaPredicted RBP12.74□□□□□ -0.37
CD9-210ENST00000543916 CSNK2BP67870 215 aa12.74□□□□□ -0.37
CD9-210ENST00000543916 RIPPLY1Q0D2K3 151 aa12.74□□□□□ -0.37
CD9-210ENST00000543916 MPPED2Q15777 294 aa12.74□□□□□ -0.37
CD9-210ENST00000543916 TMPRSS11AQ6ZMR5 421 aa12.74□□□□□ -0.37
CD9-210ENST00000543916 WDR86Q86TI4 376 aa12.74□□□□□ -0.37
CD9-210ENST00000543916 MOGAT3Q86VF5 341 aa12.74□□□□□ -0.37
CD9-210ENST00000543916 FTMTQ8N4E7 242 aa12.74□□□□□ -0.37
CD9-210ENST00000543916 SPERTQ8NA61 448 aa12.74□□□□□ -0.37
CD9-210ENST00000543916 ZNF485Q8NCK3 441 aa12.74□□□□□ -0.37
CD9-210ENST00000543916 OR8S1Q8NH09 359 aa12.74□□□□□ -0.37
CD9-210ENST00000543916 OR52N1Q8NH53 320 aa12.74□□□□□ -0.37
CD9-210ENST00000543916 PIGCQ92535 297 aa12.74□□□□□ -0.37
CD9-210ENST00000543916 ITFG2Q969R8 447 aa12.74□□□□□ -0.37
CD9-210ENST00000543916 ITPKCQ96DU7 683 aa12.74□□□□□ -0.37
CD9-210ENST00000543916 C18orf12Q96KH6 178 aa12.74□□□□□ -0.37
CD9-210ENST00000543916 FGF23Q9GZV9 251 aaPredicted RBP12.74□□□□□ -0.37
CD9-210ENST00000543916 MPC1Q9Y5U8 109 aa12.74□□□□□ -0.37
CD9-210ENST00000543916 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.73□□□□□ -0.37
CD9-210ENST00000543916 A6NIN4 97 aa12.73□□□□□ -0.37
CD9-210ENST00000543916 CLDN25C9JDP6 229 aa12.73□□□□□ -0.37
CD9-210ENST00000543916 SYT7O43581 403 aa12.73□□□□□ -0.37
CD9-210ENST00000543916 PTBP3O95758 552 aaKnown RBP12.73□□□□□ -0.37
CD9-210ENST00000543916 LALBAP00709 142 aa12.73□□□□□ -0.37
CD9-210ENST00000543916 CCDC159P0C7I6 412 aa12.73□□□□□ -0.37
CD9-210ENST00000543916 TGM4P49221 684 aa12.73□□□□□ -0.37
CD9-210ENST00000543916 TMEM33P57088 247 aa12.73□□□□□ -0.37
CD9-210ENST00000543916 SLC35A2P78381 396 aa12.73□□□□□ -0.37
CD9-210ENST00000543916 LOXL1Q08397 574 aaPredicted RBP12.73□□□□□ -0.37
CD9-210ENST00000543916 MRPL28Q13084 256 aaKnown RBP12.73□□□□□ -0.37
CD9-210ENST00000543916 MED21Q13503 144 aa12.73□□□□□ -0.37
CD9-210ENST00000543916 DOC2BQ14184 412 aa12.73□□□□□ -0.37
CD9-210ENST00000543916 DMRTC1Q5HYR2 192 aa12.73□□□□□ -0.37
CD9-210ENST00000543916 AVPI1Q5T686 147 aa12.73□□□□□ -0.37
CD9-210ENST00000543916 ZBTB37Q5TC79 503 aa12.73□□□□□ -0.37
CD9-210ENST00000543916 ZDHHC23Q8IYP9 409 aa12.73□□□□□ -0.37
CD9-210ENST00000543916 OR10AC1Q8NH08 325 aa12.73□□□□□ -0.37
CD9-210ENST00000543916 HPSE2Q8WWQ2 592 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms