RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 ACER1Q8TDN7 264 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 MBD3L1Q8WWY6 194 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 PRSS16Q9NQE7 514 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 ST3GAL6Q9Y274 331 aa7.93□□□□□ -1.14
VPS13D-212ENST00000543766 TRPM7Q96QT4 1865 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 CCL15-CCL14A0A0B4J2E2 113 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 A0A1W2PRS3 328 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 PRR33A8MZF0 331 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 PLPP1O14494 284 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 CXCL2P19875 107 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 GPD1P21695 349 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 CRISP3P54108 245 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 PLP2Q04941 152 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 EIF3IQ13347 325 aaKnown RBP7.92□□□□□ -1.14
VPS13D-212ENST00000543766 DNLZQ5SXM8 178 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 HIST2H2BCQ6DN03 193 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 HIST2H2BDQ6DRA6 164 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 LGI3Q8N145 548 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 CLEC4DQ8WXI8 215 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 TM4SF18Q96CE8 201 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 SDSLQ96GA7 329 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 TIMD4Q96H15 378 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 NUDT22Q9BRQ3 303 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 SRD5A3Q9H8P0 318 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 LMAN1LQ9HAT1 526 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 NOX3Q9HBY0 568 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 TESQ9UGI8 421 aaKnown RBP7.92□□□□□ -1.14
VPS13D-212ENST00000543766 KANTRA0A1W2PQU2 76 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 C7orf77A4D0Y5 90 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 ADH4P08319 380 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 MGMTP16455 207 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 PSMA6P60900 246 aaKnown RBP7.92□□□□□ -1.14
VPS13D-212ENST00000543766 HECTD2Q5U5R9 776 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 CPZQ66K79 652 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 AMMECR1LQ6DCA0 310 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 GPSM1Q86YR5 675 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 GBGT1Q8N5D6 347 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 TCTEX1D1Q8N7M0 179 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 OR56B4Q8NH76 319 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 SNRNP25Q9BV90 132 aaKnown RBP7.92□□□□□ -1.14
VPS13D-212ENST00000543766 UQCC1Q9NVA1 299 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 AIG1Q9NVV5 245 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 PLA2G3Q9NZ20 509 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 LRP12Q9Y561 859 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 ETV7Q9Y603 341 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 ENPP4Q9Y6X5 453 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 SSC5DA1L4H1 1573 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 A0A087X1B8 175 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 GABRB1P18505 474 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 CEACAM20Q6UY09 585 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 RPS27LQ71UM5 84 aaKnown RBP7.92□□□□□ -1.14
VPS13D-212ENST00000543766 CD163Q86VB7 1156 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 TMEM217Q8N7C4 229 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 HJURPQ8NCD3 748 aaPredicted RBP7.92□□□□□ -1.14
VPS13D-212ENST00000543766 ZNF548Q8NEK5 533 aaPredicted RBP7.92□□□□□ -1.14
VPS13D-212ENST00000543766 FAM110DQ8TAY7 271 aaPredicted RBP7.92□□□□□ -1.14
VPS13D-212ENST00000543766 ZNF675Q8TD23 568 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 RAX2Q96IS3 184 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 ZNF488Q96MN9 340 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 LRRC3BQ96PB8 259 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 GPR20Q99678 358 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 FKBP11Q9NYL4 201 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 FBLN5Q9UBX5 448 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 TBX21Q9UL17 535 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 LAMTOR2Q9Y2Q5 125 aa7.92□□□□□ -1.14
VPS13D-212ENST00000543766 ANKRD36A6QL64 1941 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 G3V3Q6 166 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 J3KTA2 159 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 SNAI1O95863 264 aaPredicted RBP7.91□□□□□ -1.14
VPS13D-212ENST00000543766 SEMG1P04279 462 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 C8AP07357 584 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 ADRA2AP08913 450 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 WNT2P09544 360 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 ADCYAP1P18509 176 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 TAS2R31P59538 309 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 ADAM8P78325 824 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 TCTN1Q2MV58 587 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 KHDC1LQ5JSQ8 128 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 ZNF678Q5SXM1 525 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 RGMBQ6NW40 437 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 MEPCEQ7L2J0 689 aaKnown RBP7.91□□□□□ -1.14
VPS13D-212ENST00000543766 ZNF676Q8N7Q3 588 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 FER1L6-AS1Q8NA97 138 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 OR52I1Q8NGK6 324 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 RXFP2Q8WXD0 754 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 UCN3Q969E3 161 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 P2RY11Q96G91 374 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 MIEN1Q9BRT3 115 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 UBQLN3Q9H347 655 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 PRDM12Q9H4Q4 367 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 CLN6Q9NWW5 311 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 PDCD11Q14690 1871 aaKnown RBP7.91□□□□□ -1.14
VPS13D-212ENST00000543766 LCTP09848 1927 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 NKX2-2O95096 273 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 GCGP01275 180 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 P04436 131 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 ZNF865P0CJ78 1059 aaPredicted RBP7.91□□□□□ -1.14
VPS13D-212ENST00000543766 OR5H8P0DN80 308 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 LYL1P12980 280 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 ACP1P24666 158 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms