RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 AVPI1Q5T686 147 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 TMEM244Q5VVB8 128 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 ARMC10Q8N2F6 343 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 OR13C8Q8NGS7 320 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 SLC22A8Q8TCC7 542 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 PRR13Q9NZ81 148 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 TMEM82A0PJX8 343 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 OR5H15A6NDH6 313 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 ZNF736B4DX44 427 aaPredicted RBP13.03□□□□□ -0.32
DDX55-209ENST00000542286 KLF7O75840 302 aaPredicted RBP13.03□□□□□ -0.32
DDX55-209ENST00000542286 DKK1O94907 266 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 ISG15P05161 165 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 OR4E1P0C645 316 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 ZNF735P0CB33 412 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 ZNF17P17021 662 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 PAN3Q58A45 887 aaKnown RBP13.03□□□□□ -0.32
DDX55-209ENST00000542286 ATPAF1Q5TC12 328 aaPredicted RBP13.03□□□□□ -0.32
DDX55-209ENST00000542286 C5orf46Q6UWT4 87 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 OR2AJ1Q8NGZ0 328 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 ELP5Q8TE02 316 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 MAFIPQ8WZ33 124 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 EDAQ92838 391 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 MRGPRFQ96AM1 343 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 POTEKPQ9BYX7 375 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 ASF1BQ9NVP2 202 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 GPN3Q9UHW5 284 aaPredicted RBP13.03□□□□□ -0.32
DDX55-209ENST00000542286 TINAGQ9UJW2 476 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 HS3ST3B1Q9Y662 390 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 A0A0A6YYD4 124 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 AGTR1P30556 359 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 BLOC1S1P78537 153 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 SNTB1Q13884 538 aaKnown RBP13.03□□□□□ -0.32
DDX55-209ENST00000542286 RHOUQ7L0Q8 258 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 BEST3Q8N1M1 668 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 KCNRGQ8N5I3 272 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 NAXEQ8NCW5 288 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 RNF138Q8WVD3 245 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 VSIG4Q9Y279 399 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 MEX3AA1L020 520 aaKnown RBP13.02□□□□□ -0.32
DDX55-209ENST00000542286 RAB19A4D1S5 217 aa13.02□□□□□ -0.32
DDX55-209ENST00000542286 SOCS1O15524 211 aa13.02□□□□□ -0.32
DDX55-209ENST00000542286 MPIG6BO95866 241 aa13.02□□□□□ -0.32
DDX55-209ENST00000542286 PMP2P02689 132 aa13.02□□□□□ -0.32
DDX55-209ENST00000542286 CX3CR1P49238 355 aa13.02□□□□□ -0.32
DDX55-209ENST00000542286 SUMO3P55854 103 aaPredicted RBP13.02□□□□□ -0.32
DDX55-209ENST00000542286 GABREP78334 506 aa13.02□□□□□ -0.32
DDX55-209ENST00000542286 ZNF283Q8N7M2 679 aa13.02□□□□□ -0.32
DDX55-209ENST00000542286 OR6S1Q8NH40 331 aa13.02□□□□□ -0.32
DDX55-209ENST00000542286 RXFP4Q8TDU9 374 aa13.02□□□□□ -0.32
DDX55-209ENST00000542286 PROK2Q9HC23 129 aa13.02□□□□□ -0.32
DDX55-209ENST00000542286 ZFP57Q9NU63 452 aa13.02□□□□□ -0.32
DDX55-209ENST00000542286 ZNF629Q9UEG4 869 aaPredicted RBP13.02□□□□□ -0.32
DDX55-209ENST00000542286 TECTAO75443 2155 aa13.02□□□□□ -0.33
DDX55-209ENST00000542286 OR14I1A6ND48 311 aa13.02□□□□□ -0.33
DDX55-209ENST00000542286 ZNF726A6NNF4 738 aa13.02□□□□□ -0.33
DDX55-209ENST00000542286 FAM25EA8MYX2 175 aa13.02□□□□□ -0.33
DDX55-209ENST00000542286 SULT1C2O00338 296 aa13.02□□□□□ -0.33
DDX55-209ENST00000542286 YKT6O15498 198 aa13.02□□□□□ -0.33
DDX55-209ENST00000542286 PATE4P0C8F1 98 aa13.02□□□□□ -0.33
DDX55-209ENST00000542286 COX6A1P12074 109 aa13.02□□□□□ -0.33
DDX55-209ENST00000542286 PNLIPP16233 465 aa13.02□□□□□ -0.33
DDX55-209ENST00000542286 HRH1P35367 487 aa13.02□□□□□ -0.33
DDX55-209ENST00000542286 ZNF93P35789 620 aaPredicted RBP13.02□□□□□ -0.33
DDX55-209ENST00000542286 PTGFRP43088 359 aa13.02□□□□□ -0.33
DDX55-209ENST00000542286 SLC6A9P48067 706 aa13.02□□□□□ -0.33
DDX55-209ENST00000542286 TAS2R19P59542 299 aa13.02□□□□□ -0.33
DDX55-209ENST00000542286 SNRPEP62304 92 aaKnown RBP13.02□□□□□ -0.33
DDX55-209ENST00000542286 CXADRP78310 365 aa13.02□□□□□ -0.33
DDX55-209ENST00000542286 LY6G6FQ5SQ64 297 aa13.02□□□□□ -0.33
DDX55-209ENST00000542286 THEM4Q5T1C6 240 aa13.02□□□□□ -0.33
DDX55-209ENST00000542286 H3F3CQ6NXT2 135 aa13.02□□□□□ -0.33
DDX55-209ENST00000542286 C1QL2Q7Z5L3 287 aa13.02□□□□□ -0.33
DDX55-209ENST00000542286 DMBX1Q8NFW5 382 aa13.02□□□□□ -0.33
DDX55-209ENST00000542286 VRK1Q99986 396 aaPredicted RBP13.02□□□□□ -0.33
DDX55-209ENST00000542286 TLNRD1Q9H1K6 362 aa13.02□□□□□ -0.33
DDX55-209ENST00000542286 PNRC2Q9NPJ4 139 aaKnown RBP13.02□□□□□ -0.33
DDX55-209ENST00000542286 FREM1Q5H8C1 2179 aa13.01□□□□□ -0.33
DDX55-209ENST00000542286 NCKAP5O14513 1909 aa13.01□□□□□ -0.33
DDX55-209ENST00000542286 IGHV1-45A0A0A0MS14 117 aa13.01□□□□□ -0.33
DDX55-209ENST00000542286 A0A1W2PNV4 684 aa13.01□□□□□ -0.33
DDX55-209ENST00000542286 OR5H14A6NHG9 310 aa13.01□□□□□ -0.33
DDX55-209ENST00000542286 SSX5O60225 188 aa13.01□□□□□ -0.33
DDX55-209ENST00000542286 ZNF20P17024 532 aa13.01□□□□□ -0.33
DDX55-209ENST00000542286 PI3P19957 117 aa13.01□□□□□ -0.33
DDX55-209ENST00000542286 PDZK1IP1Q13113 114 aa13.01□□□□□ -0.33
DDX55-209ENST00000542286 TSC22D1Q15714 1073 aa13.01□□□□□ -0.33
DDX55-209ENST00000542286 ZNF260Q3ZCT1 412 aa13.01□□□□□ -0.33
DDX55-209ENST00000542286 TRIM61Q5EBN2 209 aa13.01□□□□□ -0.33
DDX55-209ENST00000542286 C1orf100Q5SVJ3 147 aa13.01□□□□□ -0.33
DDX55-209ENST00000542286 GLIPR1L1Q6UWM5 242 aa13.01□□□□□ -0.33
DDX55-209ENST00000542286 RBMS3Q6XE24 437 aaKnown RBP13.01□□□□□ -0.33
DDX55-209ENST00000542286 ZNF584Q8IVC4 421 aa13.01□□□□□ -0.33
DDX55-209ENST00000542286 CASTOR1Q8WTX7 329 aa13.01□□□□□ -0.33
DDX55-209ENST00000542286 C15orf40Q8WUR7 153 aa13.01□□□□□ -0.33
DDX55-209ENST00000542286 ZC3H10Q96K80 434 aaKnown RBP13.01□□□□□ -0.33
DDX55-209ENST00000542286 RBM24Q9BX46 236 aaKnown RBP13.01□□□□□ -0.33
DDX55-209ENST00000542286 BCL2L14Q9BZR8 327 aa13.01□□□□□ -0.33
DDX55-209ENST00000542286 TAS2R8Q9NYW2 309 aa13.01□□□□□ -0.33
DDX55-209ENST00000542286 TTC28Q96AY4 2481 aa13.01□□□□□ -0.33
DDX55-209ENST00000542286 TNFSF11O14788 317 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms