RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 SHPKQ9UHJ6 478 aa11.05□□□□□ -0.64
RNF4-222ENST00000541204 BDP1A6H8Y1 2624 aa11.05□□□□□ -0.64
RNF4-222ENST00000541204 ACTL6AO96019 429 aa11.05□□□□□ -0.64
RNF4-222ENST00000541204 SUMO3P55854 103 aaPredicted RBP11.05□□□□□ -0.64
RNF4-222ENST00000541204 DTWD2Q8NBA8 298 aa11.05□□□□□ -0.64
RNF4-222ENST00000541204 OR51E1Q8TCB6 317 aa11.05□□□□□ -0.64
RNF4-222ENST00000541204 ELP5Q8TE02 316 aa11.05□□□□□ -0.64
RNF4-222ENST00000541204 RRNAD1Q96FB5 475 aaKnown RBP11.05□□□□□ -0.64
RNF4-222ENST00000541204 MRGPRX4Q96LA9 322 aa11.05□□□□□ -0.64
RNF4-222ENST00000541204 UQCC2Q9BRT2 126 aa11.05□□□□□ -0.64
RNF4-222ENST00000541204 SOX7Q9BT81 388 aa11.05□□□□□ -0.64
RNF4-222ENST00000541204 A0A0A6YYD4 124 aa11.05□□□□□ -0.64
RNF4-222ENST00000541204 RAB19A4D1S5 217 aa11.05□□□□□ -0.64
RNF4-222ENST00000541204 PCP4L1A6NKN8 68 aa11.05□□□□□ -0.64
RNF4-222ENST00000541204 ABOP16442 354 aa11.05□□□□□ -0.64
RNF4-222ENST00000541204 HOXA6P31267 233 aa11.05□□□□□ -0.64
RNF4-222ENST00000541204 CLRN1P58418 232 aa11.05□□□□□ -0.64
RNF4-222ENST00000541204 ZXDAP98168 799 aa11.05□□□□□ -0.64
RNF4-222ENST00000541204 ZP4Q12836 540 aa11.05□□□□□ -0.64
RNF4-222ENST00000541204 IL11RAQ14626 422 aa11.05□□□□□ -0.64
RNF4-222ENST00000541204 MICBQ29980 383 aa11.05□□□□□ -0.64
RNF4-222ENST00000541204 HOGA1Q86XE5 327 aa11.05□□□□□ -0.64
RNF4-222ENST00000541204 FAM219AQ8IW50 185 aa11.05□□□□□ -0.64
RNF4-222ENST00000541204 UEVLDQ8IX04 471 aa11.05□□□□□ -0.64
RNF4-222ENST00000541204 TMEM104Q8NE00 496 aa11.05□□□□□ -0.64
RNF4-222ENST00000541204 SLC39A7Q92504 469 aa11.05□□□□□ -0.64
RNF4-222ENST00000541204 RNF126Q9BV68 326 aa11.05□□□□□ -0.64
RNF4-222ENST00000541204 SLC26A1Q9H2B4 701 aa11.05□□□□□ -0.64
RNF4-222ENST00000541204 ZNF160Q9HCG1 818 aa11.05□□□□□ -0.64
RNF4-222ENST00000541204 KLHL13Q9P2N7 655 aa11.05□□□□□ -0.64
RNF4-222ENST00000541204 B3GALT5Q9Y2C3 310 aa11.05□□□□□ -0.64
RNF4-222ENST00000541204 POLR1DQ9Y2S0 133 aa11.05□□□□□ -0.64
RNF4-222ENST00000541204 CHCHD2Q9Y6H1 151 aaPredicted RBP11.05□□□□□ -0.64
RNF4-222ENST00000541204 IGHV3-15A0A0B4J1V0 119 aa11.04□□□□□ -0.64
RNF4-222ENST00000541204 PMS2P1A4D2B8 440 aa11.04□□□□□ -0.64
RNF4-222ENST00000541204 TMEM14DPA8MWL7 114 aa11.04□□□□□ -0.64
RNF4-222ENST00000541204 SOCS1O15524 211 aa11.04□□□□□ -0.64
RNF4-222ENST00000541204 FGF16O43320 207 aa11.04□□□□□ -0.64
RNF4-222ENST00000541204 KLF7O75840 302 aaPredicted RBP11.04□□□□□ -0.64
RNF4-222ENST00000541204 SLC2A1P11166 492 aa11.04□□□□□ -0.64
RNF4-222ENST00000541204 PI3P19957 117 aa11.04□□□□□ -0.64
RNF4-222ENST00000541204 NPY4RP50391 375 aa11.04□□□□□ -0.64
RNF4-222ENST00000541204 COMMD2Q86X83 199 aa11.04□□□□□ -0.64
RNF4-222ENST00000541204 LDLRAD3Q86YD5 345 aa11.04□□□□□ -0.64
RNF4-222ENST00000541204 ZSCAN4Q8NAM6 433 aaPredicted RBP11.04□□□□□ -0.64
RNF4-222ENST00000541204 BHLHE23Q8NDY6 225 aa11.04□□□□□ -0.64
RNF4-222ENST00000541204 OR5T2Q8NGG2 359 aa11.04□□□□□ -0.64
RNF4-222ENST00000541204 HS3ST3B1Q9Y662 390 aa11.04□□□□□ -0.64
RNF4-222ENST00000541204 IGHV1-45A0A0A0MS14 117 aa11.04□□□□□ -0.64
RNF4-222ENST00000541204 A0A1W2PP11 408 aa11.04□□□□□ -0.64
RNF4-222ENST00000541204 C9J4A7 227 aa11.04□□□□□ -0.64
RNF4-222ENST00000541204 F8VVB4 439 aa11.04□□□□□ -0.64
RNF4-222ENST00000541204 F8VWA3 439 aa11.04□□□□□ -0.64
RNF4-222ENST00000541204 H0YIZ8 118 aa11.04□□□□□ -0.64
RNF4-222ENST00000541204 ADAP1O75689 374 aa11.04□□□□□ -0.64
RNF4-222ENST00000541204 CCL3P10147 92 aa11.04□□□□□ -0.64
RNF4-222ENST00000541204 TPT1P13693 172 aaKnown RBP11.04□□□□□ -0.64
RNF4-222ENST00000541204 ANOS1P23352 680 aa11.04□□□□□ -0.64
RNF4-222ENST00000541204 SLC9A3R2Q15599 337 aa11.04□□□□□ -0.64
RNF4-222ENST00000541204 DMRTC1Q5HYR2 192 aa11.04□□□□□ -0.64
RNF4-222ENST00000541204 PLAC9Q5JTB6 97 aa11.04□□□□□ -0.64
RNF4-222ENST00000541204 GLIPR1L1Q6UWM5 242 aa11.04□□□□□ -0.64
RNF4-222ENST00000541204 LINC00518Q8N0U6 118 aa11.04□□□□□ -0.64
RNF4-222ENST00000541204 STOML3Q8TAV4 291 aa11.04□□□□□ -0.64
RNF4-222ENST00000541204 TMED6Q8WW62 240 aa11.04□□□□□ -0.64
RNF4-222ENST00000541204 TMEM41AQ96HV5 264 aa11.04□□□□□ -0.64
RNF4-222ENST00000541204 LPAR5Q9H1C0 372 aa11.04□□□□□ -0.64
RNF4-222ENST00000541204 BANF2Q9H503 90 aa11.04□□□□□ -0.64
RNF4-222ENST00000541204 PRELID3BQ9Y3B1 194 aa11.04□□□□□ -0.64
RNF4-222ENST00000541204 B3GALT1Q9Y5Z6 326 aa11.04□□□□□ -0.64
RNF4-222ENST00000541204 TEX13DA0A0J9YY54 714 aaPredicted RBP11.03□□□□□ -0.64
RNF4-222ENST00000541204 CER1O95813 267 aa11.03□□□□□ -0.64
RNF4-222ENST00000541204 MPIG6BO95866 241 aa11.03□□□□□ -0.64
RNF4-222ENST00000541204 F12P00748 615 aaPredicted RBP11.03□□□□□ -0.64
RNF4-222ENST00000541204 ZNF20P17024 532 aa11.03□□□□□ -0.64
RNF4-222ENST00000541204 FLI1Q01543 452 aaPredicted RBP11.03□□□□□ -0.64
RNF4-222ENST00000541204 AIMP2Q13155 320 aaKnown RBP11.03□□□□□ -0.64
RNF4-222ENST00000541204 PLEKHN1Q494U1 663 aaPredicted RBP11.03□□□□□ -0.64
RNF4-222ENST00000541204 NKAPLQ5M9Q1 402 aa11.03□□□□□ -0.64
RNF4-222ENST00000541204 CBLN2Q8IUK8 224 aa11.03□□□□□ -0.64
RNF4-222ENST00000541204 BAP18Q8IXM2 172 aa11.03□□□□□ -0.64
RNF4-222ENST00000541204 SVBPQ8N300 66 aa11.03□□□□□ -0.64
RNF4-222ENST00000541204 TMEM156Q8N614 296 aa11.03□□□□□ -0.64
RNF4-222ENST00000541204 TERB2Q8NHR7 220 aa11.03□□□□□ -0.64
RNF4-222ENST00000541204 NMES1Q9C002 83 aa11.03□□□□□ -0.64
RNF4-222ENST00000541204 C5orf66Q9H5L9 145 aa11.03□□□□□ -0.64
RNF4-222ENST00000541204 TMEM231Q9H6L2 316 aa11.03□□□□□ -0.64
RNF4-222ENST00000541204 MSGN1A6NI15 193 aa11.03□□□□□ -0.64
RNF4-222ENST00000541204 F10P00742 488 aa11.03□□□□□ -0.64
RNF4-222ENST00000541204 COX6A1P12074 109 aa11.03□□□□□ -0.64
RNF4-222ENST00000541204 MSX1P28360 303 aa11.03□□□□□ -0.64
RNF4-222ENST00000541204 OR3A4PP47883 348 aa11.03□□□□□ -0.64
RNF4-222ENST00000541204 SGCAQ16586 387 aa11.03□□□□□ -0.64
RNF4-222ENST00000541204 TMEM128Q5BJH2 165 aa11.03□□□□□ -0.64
RNF4-222ENST00000541204 TMEM230Q96A57 120 aa11.03□□□□□ -0.64
RNF4-222ENST00000541204 ZNF775Q96BV0 537 aaPredicted RBP11.03□□□□□ -0.64
RNF4-222ENST00000541204 RAB3CQ96E17 227 aa11.03□□□□□ -0.64
RNF4-222ENST00000541204 CYTL1Q9NRR1 136 aa11.03□□□□□ -0.64
RNF4-222ENST00000541204 MRPS28Q9Y2Q9 187 aaKnown RBP11.03□□□□□ -0.64
RNF4-222ENST00000541204 EXPH5Q8NEV8 1989 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms