RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 TNFRSF9Q07011 255 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 MGAT3Q09327 533 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 ILKQ13418 452 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 APOFQ13790 326 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 TRAM2Q15035 370 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 PTGES3Q15185 160 aaKnown RBP3.48□□□□□ -1.85
YBX3-210ENST00000540975 TRIP13Q15645 432 aaPredicted RBP3.48□□□□□ -1.85
YBX3-210ENST00000540975 NRF1Q16656 503 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 GUK1Q16774 197 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 DUSP7Q16829 419 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 EXOC3L4Q17RC7 722 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 TNFAIP8L3Q5GJ75 292 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 FRMPD2BQ6IN97 320 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 RPL13AP3Q6NVV1 102 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 COX15Q7KZN9 410 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 HDDC2Q7Z4H3 204 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 ZFP82Q8N141 532 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 PQLC3Q8N755 202 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 OR51G1Q8NGK1 321 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 TCEAL3Q969E4 200 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 CCDC124Q96CT7 223 aaKnown RBP3.48□□□□□ -1.85
YBX3-210ENST00000540975 C4orf36Q96KX1 117 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 KCNA7Q96RP8 456 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 TGS1Q96RS0 853 aaKnown RBP3.48□□□□□ -1.85
YBX3-210ENST00000540975 NPAS2Q99743 824 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 C2orf88Q9BSF0 95 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 ZNF2Q9BSG1 426 aaPredicted RBP3.48□□□□□ -1.85
YBX3-210ENST00000540975 MED10Q9BTT4 135 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 ALG12Q9BV10 488 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 KIFC1Q9BW19 673 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 TM6SF2Q9BZW4 377 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 MEAF6Q9HAF1 191 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 PLGRKTQ9HBL7 147 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 ZNF160Q9HCG1 818 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 IFT46Q9NQC8 304 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 RGS18Q9NS28 235 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 SDHAF2Q9NX18 166 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 SNX12Q9UMY4 172 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 GSTK1Q9Y2Q3 226 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 ASB4Q9Y574 426 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 FLT4P35916 1363 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 CRB1P82279 1406 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 FAM208AQ9UK61 1670 aaKnown RBP3.47□□□□□ -1.85
YBX3-210ENST00000540975 MYH13Q9UKX3 1938 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 IGHV3OR16-13A0A075B7E8 117 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 IGHV3-64DA0A0J9YX35 117 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 A0A1W2PQL4 384 aaPredicted RBP3.47□□□□□ -1.85
YBX3-210ENST00000540975 A0A1W2PRG6 482 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 LRCOL1A6NCL2 159 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 A6NIZ1 184 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 METTL15A6NJ78 407 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 MSH4O15457 936 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 ARPC5O15511 151 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 TOM1O60784 492 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 ADAP1O75689 374 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 NDUFB10O96000 172 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 CA1P00915 261 aaPredicted RBP3.47□□□□□ -1.85
YBX3-210ENST00000540975 RBP1P09455 135 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 ZDHHC11BP0C7U3 371 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 OCMP0CE72 109 aaPredicted RBP3.47□□□□□ -1.85
YBX3-210ENST00000540975 HLA-DMAP28067 261 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 YAP1P46937 504 aaKnown RBP3.47□□□□□ -1.85
YBX3-210ENST00000540975 DEFA6Q01524 100 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 CNTN2Q02246 1040 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 SLC39A6Q13433 755 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 TMED2Q15363 201 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 SLC9A3R2Q15599 337 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 PSG3Q16557 428 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 TIGD3Q6B0B8 471 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 RWDD4Q6NW29 188 aaKnown RBP3.47□□□□□ -1.85
YBX3-210ENST00000540975 SPESP1Q6UW49 350 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 CD300LGQ6UXG3 332 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 PAQR7Q86WK9 346 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 BOD1L2Q8IYS8 172 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 OR51L1Q8NGJ5 315 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 RHEBL1Q8TAI7 183 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 ASB9Q96DX5 294 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 CERS2Q96G23 380 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 SENP8Q96LD8 212 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 ZNF641Q96N77 438 aaPredicted RBP3.47□□□□□ -1.85
YBX3-210ENST00000540975 SERPINB12Q96P63 405 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 QKIQ96PU8 341 aaKnown RBP eCLIP3.47□□□□□ -1.85
YBX3-210ENST00000540975 UTP23Q9BRU9 249 aaKnown RBP3.47□□□□□ -1.85
YBX3-210ENST00000540975 PLA2G2FQ9BZM2 168 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 SELENOIQ9C0D9 397 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 PCBD2Q9H0N5 130 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 TRABDQ9H4I3 376 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 CD209Q9NNX6 404 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 NUFIP1Q9UHK0 495 aaKnown RBP3.47□□□□□ -1.85
YBX3-210ENST00000540975 OPN4Q9UHM6 478 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 FBXL3Q9UKT7 428 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 SLC22A13Q9Y226 551 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 RASD1Q9Y272 281 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 UTP11Q9Y3A2 253 aaKnown RBP3.47□□□□□ -1.85
YBX3-210ENST00000540975 NPTNQ9Y639 398 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 URGCP-MRPS24S4R325 110 aa3.47□□□□□ -1.85
YBX3-210ENST00000540975 NRKQ7Z2Y5 1582 aa3.46□□□□□ -1.85
YBX3-210ENST00000540975 A0A1B0GUL6 1792 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 CPS1P31327 1500 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 A0A096LNJ9 63 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms