RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 MIXL1Q9H2W2 232 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 OPA3Q9H6K4 179 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 PPP1R3EQ9H7J1 279 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 ZDHHC11Q9H8X9 412 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 UBTD1Q9HAC8 227 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 PLEKHA1Q9HB21 404 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 PCDHB16Q9NRJ7 776 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 PLSCR2Q9NRY7 297 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 TMEM38BQ9NVV0 291 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 FAM206AQ9NX38 181 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 UPB1Q9UBR1 384 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 GHRLQ9UBU3 117 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 AK6Q9Y3D8 172 aaKnown RBP7.28□□□□□ -1.24
CHD4-208ENST00000540960 LHFPL6Q9Y693 200 aa7.28□□□□□ -1.24
CHD4-208ENST00000540960 A0A1B0GVC2 190 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 LOC107986453A0A1B0GWG9 222 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 NAP1L6A6NFF2 107 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 FAM166BA8MTA8 275 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 AHRRA9YTQ3 701 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 ZNF814B7Z6K7 855 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 H3BUI4 141 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 MAGEB4O15481 346 aaPredicted RBP7.27□□□□□ -1.25
CHD4-208ENST00000540960 SIAH2O43255 324 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 SGCEO43556 437 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 GSTZ1O43708 216 aaPredicted RBP7.27□□□□□ -1.25
CHD4-208ENST00000540960 MPZL1O95297 269 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 BPNT1O95861 308 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 ALDOBP05062 364 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 SERPINA5P05154 406 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 CD37P11049 281 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 ELK1P19419 428 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 RAB6AP20340 208 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 CCL1P22362 96 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 BDKRB2P30411 391 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 FAUP35544 74 aaKnown RBP7.27□□□□□ -1.25
CHD4-208ENST00000540960 SOX2P48431 317 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 CX3CR1P49238 355 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 GSK3AP49840 483 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 SELENOPP49908 381 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 MMP15P51511 669 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 PLP2Q04941 152 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 ZBTB37Q5TC79 503 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 UNQ6126/PRO20091Q6UXV3 157 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 P4HA3Q7Z4N8 544 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 LINC00346Q8IVM7 164 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 FTMTQ8N4E7 242 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 SLC22A24Q8N4F4 322 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 PNLDC1Q8NA58 520 aaKnown RBP7.27□□□□□ -1.25
CHD4-208ENST00000540960 NAXEQ8NCW5 288 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 ENKURQ8TC29 256 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 AKAP1Q92667 903 aaKnown RBP eCLIP7.27□□□□□ -1.25
CHD4-208ENST00000540960 GMPPAQ96IJ6 420 aaPredicted RBP7.27□□□□□ -1.25
CHD4-208ENST00000540960 FOXB1Q99853 325 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 ZNF416Q9BWM5 594 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 ACTR6Q9GZN1 396 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 CRLF2Q9HC73 371 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 G6PC2Q9NQR9 355 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 PLEK2Q9NYT0 353 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 NPAP1Q9NZP6 1156 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 MALRD1Q5VYJ5 2156 aa7.27□□□□□ -1.25
CHD4-208ENST00000540960 EPPK1P58107 5090 aaKnown RBP7.27□□□□□ -1.25
CHD4-208ENST00000540960 EXPH5Q8NEV8 1989 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 PINLYPA6NC86 204 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 SLC22A20A6NK97 555 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 PRR32B1ATL7 298 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 J3QW42 95 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 SULT1C2O00338 296 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 PIN1P1O15428 100 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 NCR1O76036 304 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 GPANK1O95872 356 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 ATF1P18846 271 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 BMP5P22003 454 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 PRKACBP22694 351 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 HTR2CP28335 458 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 THBS4P35443 961 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 STARP49675 285 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 ASCL1P50553 236 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 CAV3P56539 151 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 DYRK1AQ13627 763 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 INSL4Q14641 139 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 CLEC12BQ2HXU8 276 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 C1orf100Q5SVJ3 147 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 FAM27D1Q5T7N8 215 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 PLET1Q6UQ28 207 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 ZNF813Q6ZN06 617 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 UTS2BQ765I0 119 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 SPATC1Q76KD6 591 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 SLC16A14Q7RTX9 510 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 LRRTM1Q86UE6 522 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 COMMD2Q86X83 199 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 OR1F12Q8NHA8 337 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 FCAMRQ8WWV6 532 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 IGFBPL1Q8WX77 278 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 HSD17B8Q92506 261 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 RGP1Q92546 391 aaPredicted RBP7.26□□□□□ -1.25
CHD4-208ENST00000540960 RNF166Q96A37 237 aaPredicted RBP7.26□□□□□ -1.25
CHD4-208ENST00000540960 HAVCR1Q96D42 359 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 ITPKCQ96DU7 683 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 ZC3HAV1LQ96H79 300 aaKnown RBP7.26□□□□□ -1.25
CHD4-208ENST00000540960 AMELYQ99218 206 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms