RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 SYNGR1O43759 233 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 GMDSO60547 372 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 SERPINB7O75635 380 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 OR7A10O76100 309 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 IGF2P01344 180 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 SERPINE1P05121 402 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 ALDOCP09972 364 aaKnown RBP3.69□□□□□ -1.82
SNHG1-214ENST00000540865 TSPAN19P0C672 248 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 MUC1P15941 1255 aaPredicted RBP3.69□□□□□ -1.82
SNHG1-214ENST00000540865 FUT1P19526 365 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 CHATP28329 748 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 CASQ1P31415 396 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 VDAC2P45880 294 aaPredicted RBP3.69□□□□□ -1.82
SNHG1-214ENST00000540865 DLX1P56177 255 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 HOXA4Q00056 320 aaPredicted RBP3.69□□□□□ -1.82
SNHG1-214ENST00000540865 CDK6Q00534 326 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 PRB3Q04118 309 aaPredicted RBP3.69□□□□□ -1.82
SNHG1-214ENST00000540865 AQP6Q13520 282 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 BLMHQ13867 455 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 OR8G1Q15617 311 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 NPTX1Q15818 432 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 GTDC1Q4AE62 458 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 ENTPD8Q5MY95 495 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 GCNT6Q5T4J0 391 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 SLC36A1Q7Z2H8 476 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 KIRREL3Q8IZU9 778 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 GCSAMQ8N6F7 178 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 OR5D13Q8NGL4 314 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 OR1F12Q8NHA8 337 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 SVIPQ8NHG7 77 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 NFKBIDQ8NI38 313 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 LIPHQ8WWY8 451 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 ACOT11Q8WXI4 607 aaPredicted RBP3.69□□□□□ -1.82
SNHG1-214ENST00000540865 SLC7A6Q92536 515 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 VPS33AQ96AX1 596 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 APOPT1Q96IL0 206 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 RCHY1Q96PM5 261 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 OR5M11Q96RB7 305 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 TXLNGYQ9BZA5 131 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 MUC13Q9H3R2 512 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 RMND5AQ9H871 391 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 MEPEQ9NQ76 525 aaPredicted RBP3.69□□□□□ -1.82
SNHG1-214ENST00000540865 C1orf123Q9NWV4 160 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 PITPNC1Q9UKF7 332 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 AURKCQ9UQB9 309 aa3.69□□□□□ -1.82
SNHG1-214ENST00000540865 DYNC1H1Q14204 4646 aaKnown RBP3.68□□□□□ -1.82
SNHG1-214ENST00000540865 HERC1Q15751 4861 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 A0A1B0GW55 424 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 TRAPPC13A5PLN9 417 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 A6NDX4 124 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 A6NIZ1 184 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 NKX6-3A6NJ46 265 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 CPSF4LA6NMK7 179 aaKnown RBP3.68□□□□□ -1.82
SNHG1-214ENST00000540865 M0R3H8 397 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 NDUFB3O43676 98 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 MT-ND1P03886 318 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 BPGMP07738 259 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 DUX4L2P0CJ85 424 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 DUX4L3P0CJ86 424 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 DUX4L4P0CJ87 422 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 DUX4L5P0CJ88 424 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 DUX4L6P0CJ89 424 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 DUX4L7P0CJ90 424 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 TGM4P49221 684 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 GSK3BP49841 420 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 RPL14P50914 215 aaKnown RBP3.68□□□□□ -1.82
SNHG1-214ENST00000540865 RAP1BP61224 184 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 RPL27P61353 136 aaKnown RBP3.68□□□□□ -1.82
SNHG1-214ENST00000540865 RAP1AP62834 184 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 MZT1Q08AG7 82 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 FOXI1Q12951 378 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 GK2Q14410 553 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-214ENST00000540865 MICBQ29980 383 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 ZIK1Q3SY52 487 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-214ENST00000540865 CCDC92Q53HC0 331 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-214ENST00000540865 LRRC10Q5BKY1 277 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 WDR38Q5JTN6 314 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 C6orf10Q5SRN2 563 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 ATPAF1Q5TC12 328 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-214ENST00000540865 ZFAND6Q6FIF0 208 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 HCP5Q6MZN7 132 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 DUX4L9Q6RFH8 374 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-214ENST00000540865 COLCA1Q6ZS62 124 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 CCDC121Q6ZUS5 278 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 PIGWQ7Z7B1 504 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 CENPVQ7Z7K6 275 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-214ENST00000540865 ARMC8Q8IUR7 673 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 FGFRL1Q8N441 504 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 ZNF781Q8N8C0 355 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 OR51D1Q8NGF3 324 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 OR4X2Q8NGF9 303 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 OR6T1Q8NGN1 323 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 MOSPD2Q8NHP6 518 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 TCP10LQ8TDR4 215 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 ADAMTS16Q8TE57 1224 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 AENQ8WTP8 325 aaKnown RBP3.68□□□□□ -1.82
SNHG1-214ENST00000540865 SPRYD4Q8WW59 207 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-214ENST00000540865 MYDGFQ969H8 173 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 C12orf43Q96C57 262 aaKnown RBP3.68□□□□□ -1.82
SNHG1-214ENST00000540865 SGTBQ96EQ0 304 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms