RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 DUSP18Q8NEJ0 188 aa10.84□□□□□ -0.67
SMAD3-204ENST00000540846 OR52N4Q8NGI2 321 aa10.84□□□□□ -0.67
SMAD3-204ENST00000540846 CHAC2Q8WUX2 184 aa10.84□□□□□ -0.67
SMAD3-204ENST00000540846 PTX4Q96A99 478 aa10.84□□□□□ -0.67
SMAD3-204ENST00000540846 OPN3Q9H1Y3 402 aaPredicted RBP10.84□□□□□ -0.67
SMAD3-204ENST00000540846 OR10A2Q9H208 303 aa10.84□□□□□ -0.67
SMAD3-204ENST00000540846 AUNIPQ9H7T9 357 aa10.84□□□□□ -0.67
SMAD3-204ENST00000540846 ZNF224Q9NZL3 707 aa10.84□□□□□ -0.67
SMAD3-204ENST00000540846 JKAMPQ9P055 326 aa10.84□□□□□ -0.67
SMAD3-204ENST00000540846 ZNF629Q9UEG4 869 aaPredicted RBP10.84□□□□□ -0.67
SMAD3-204ENST00000540846 RBMX2Q9Y388 322 aaKnown RBP10.84□□□□□ -0.67
SMAD3-204ENST00000540846 CACNG2Q9Y698 323 aa10.84□□□□□ -0.67
SMAD3-204ENST00000540846 V9GYS6 101 aa10.84□□□□□ -0.67
SMAD3-204ENST00000540846 CCL21O00585 134 aa10.83□□□□□ -0.68
SMAD3-204ENST00000540846 CD3GP09693 182 aa10.83□□□□□ -0.68
SMAD3-204ENST00000540846 IGHV1-2P23083 117 aa10.83□□□□□ -0.68
SMAD3-204ENST00000540846 THBS4P35443 961 aa10.83□□□□□ -0.68
SMAD3-204ENST00000540846 HTR5AP47898 357 aa10.83□□□□□ -0.68
SMAD3-204ENST00000540846 CASP6P55212 293 aa10.83□□□□□ -0.68
SMAD3-204ENST00000540846 HGFACQ04756 655 aa10.83□□□□□ -0.68
SMAD3-204ENST00000540846 GPR176Q14439 515 aa10.83□□□□□ -0.68
SMAD3-204ENST00000540846 GFOD2Q3B7J2 385 aa10.83□□□□□ -0.68
SMAD3-204ENST00000540846 TMEM211Q6ICI0 200 aa10.83□□□□□ -0.68
SMAD3-204ENST00000540846 ZNF474Q6S9Z5 364 aaPredicted RBP10.83□□□□□ -0.68
SMAD3-204ENST00000540846 DNM1P46Q6ZS02 220 aa10.83□□□□□ -0.68
SMAD3-204ENST00000540846 BIVMQ86UB2 503 aa10.83□□□□□ -0.68
SMAD3-204ENST00000540846 OR4D6Q8NGJ1 314 aa10.83□□□□□ -0.68
SMAD3-204ENST00000540846 AKR7LQ8NHP1 331 aa10.83□□□□□ -0.68
SMAD3-204ENST00000540846 FGFBP3Q8TAT2 258 aa10.83□□□□□ -0.68
SMAD3-204ENST00000540846 C10orf35Q96D05 121 aa10.83□□□□□ -0.68
SMAD3-204ENST00000540846 ITPKCQ96DU7 683 aa10.83□□□□□ -0.68
SMAD3-204ENST00000540846 NKX3-1Q99801 234 aaPredicted RBP10.83□□□□□ -0.68
SMAD3-204ENST00000540846 C7orf50Q9BRJ6 194 aaKnown RBP10.83□□□□□ -0.68
SMAD3-204ENST00000540846 MMP28Q9H239 520 aa10.83□□□□□ -0.68
SMAD3-204ENST00000540846 KCNK15Q9H427 330 aa10.83□□□□□ -0.68
SMAD3-204ENST00000540846 ETAA1Q9NY74 926 aa10.83□□□□□ -0.68
SMAD3-204ENST00000540846 PROCRQ9UNN8 238 aa10.83□□□□□ -0.68
SMAD3-204ENST00000540846 FAM240BA0A1B0GVZ2 78 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 CIB4A0PJX0 185 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 GGT3PA6NGU5 568 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 DHRS7CA6NNS2 312 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 MSTNO14793 375 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 BPNT1O95861 308 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 ALDOBP05062 364 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 HNRNPCP07910 306 aaKnown RBP eCLIP10.82□□□□□ -0.689e-7■■□□□ 13.9
SMAD3-204ENST00000540846 PATE4P0C8F1 98 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 ARSBP15848 533 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 RAB6AP20340 208 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 MPGP29372 298 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 SLC6A1P30531 599 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 OPRM1P35372 400 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 GDNFP39905 211 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 KLF9Q13886 244 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-204ENST00000540846 SNAI3Q3KNW1 292 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 RNASE12Q5GAN4 147 aaKnown RBP10.82□□□□□ -0.68
SMAD3-204ENST00000540846 SFRP5Q5T4F7 317 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 UBE2J2Q8N2K1 259 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 TOMM5Q8N4H5 51 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 OR52I2Q8NH67 350 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 SSC4DQ8WTU2 575 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 RND1Q92730 232 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 CCDC120Q96HB5 630 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 BOD1Q96IK1 185 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 CNTD2Q9H8S5 307 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 DIABLOQ9NR28 239 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 UPB1Q9UBR1 384 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 FBLN5Q9UBX5 448 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 RALYQ9UKM9 306 aaKnown RBP10.82□□□□□ -0.68
SMAD3-204ENST00000540846 A0A0A6YYH2 397 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 A6NJ64 397 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 A8MXE2 369 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 MTRF1O75570 445 aaKnown RBP10.82□□□□□ -0.68
SMAD3-204ENST00000540846 ALX3O95076 343 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 BMP5P22003 454 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 BTCP35070 178 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 RANBP1P43487 201 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 QRFPP83859 136 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 DYRK1AQ13627 763 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 PABPC1L2AQ5JQF8 200 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 C9orf135Q5VTT2 229 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 AGAP6Q5VW22 663 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 PLET1Q6UQ28 207 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 UTS2BQ765I0 119 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 KRT74Q7RTS7 529 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 FJX1Q86VR8 437 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 FCAMRQ8WWV6 532 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 PP6455Q8WZ26 134 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 PIGMQ9H3S5 423 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 RNF121Q9H920 327 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 NPAP1Q9NZP6 1156 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 ZNF391Q9UJN7 358 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 PRR14LQ5THK1 2151 aa10.82□□□□□ -0.68
SMAD3-204ENST00000540846 MYO18BQ8IUG5 2567 aa10.81□□□□□ -0.68
SMAD3-204ENST00000540846 RTTNQ86VV8 2226 aa10.81□□□□□ -0.68
SMAD3-204ENST00000540846 ADGRG4Q8IZF6 3080 aa10.81□□□□□ -0.68
SMAD3-204ENST00000540846 IGKV1-9A0A0C4DH69 117 aa10.81□□□□□ -0.68
SMAD3-204ENST00000540846 ZNF503-AS2A6NEH8 195 aa10.81□□□□□ -0.68
SMAD3-204ENST00000540846 ORC5O43913 435 aa10.81□□□□□ -0.68
SMAD3-204ENST00000540846 KDM4BO94953 1096 aa10.81□□□□□ -0.68
SMAD3-204ENST00000540846 COX5BP10606 129 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms