RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 PPP1R35Q8TAP8 253 aa5.98□□□□□ -1.45
YBX3-209ENST00000540747 WIPF2Q8TF74 440 aaPredicted RBP5.98□□□□□ -1.45
YBX3-209ENST00000540747 CANT1Q8WVQ1 401 aa5.98□□□□□ -1.45
YBX3-209ENST00000540747 SLCO4A1Q96BD0 722 aa5.98□□□□□ -1.45
YBX3-209ENST00000540747 CENPNQ96H22 339 aaPredicted RBP5.98□□□□□ -1.45
YBX3-209ENST00000540747 TPD52L3Q96J77 140 aa5.98□□□□□ -1.45
YBX3-209ENST00000540747 MAP6Q96JE9 813 aa5.98□□□□□ -1.45
YBX3-209ENST00000540747 ATF6BQ99941 703 aa5.98□□□□□ -1.45
YBX3-209ENST00000540747 KCTD14Q9BQ13 255 aaPredicted RBP5.98□□□□□ -1.45
YBX3-209ENST00000540747 ADAT1Q9BUB4 502 aaKnown RBP5.98□□□□□ -1.45
YBX3-209ENST00000540747 FNDC11Q9BVV2 318 aa5.98□□□□□ -1.45
YBX3-209ENST00000540747 CNTD2Q9H8S5 307 aa5.98□□□□□ -1.45
YBX3-209ENST00000540747 CMTM6Q9NX76 183 aa5.98□□□□□ -1.45
YBX3-209ENST00000540747 MRPL15Q9P015 296 aaKnown RBP5.98□□□□□ -1.45
YBX3-209ENST00000540747 ABCD2Q9UBJ2 740 aa5.98□□□□□ -1.45
YBX3-209ENST00000540747 RPS6KA6Q9UK32 745 aa5.98□□□□□ -1.45
YBX3-209ENST00000540747 B9D1Q9UPM9 204 aa5.98□□□□□ -1.45
YBX3-209ENST00000540747 TMEM5Q9Y2B1 443 aa5.98□□□□□ -1.45
YBX3-209ENST00000540747 MYRFQ9Y2G1 1151 aa5.98□□□□□ -1.45
YBX3-209ENST00000540747 AP3M1Q9Y2T2 418 aa5.98□□□□□ -1.45
YBX3-209ENST00000540747 NOP16Q9Y3C1 178 aaKnown RBP5.98□□□□□ -1.45
YBX3-209ENST00000540747 IER3IP1Q9Y5U9 82 aa5.98□□□□□ -1.45
YBX3-209ENST00000540747 A0A087WXM4 84 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 A0A1W2PRQ8 180 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 SOCS2O14508 198 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 NPFFO15130 113 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 ARPC2O15144 300 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 ARPC3O15145 178 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 SMIM18P0DKX4 95 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 PSKH1P11801 424 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 ATP6V1B1P15313 513 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 ATP6V1B2P21281 511 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 CRABP1P29762 137 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 GABRA5P31644 462 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 IFNA8P32881 189 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 KIR2DS4P43632 304 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 TGM4P49221 684 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 DLX1P56177 255 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 ZNF92Q03936 586 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 LSAMPQ13449 338 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 DGCR6Q14129 220 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 SEC23BQ15437 767 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 OR8B8Q15620 311 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 FAM189A2Q15884 450 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 PCK2Q16822 640 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 SNAI3Q3KNW1 292 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 ATPAF1Q5TC12 328 aaPredicted RBP5.97□□□□□ -1.45
YBX3-209ENST00000540747 HCP5Q6MZN7 132 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 FKBP9P1Q75LS8 142 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 CBLL1Q75N03 491 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 SATL1Q86VE3 508 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 LINC00346Q8IVM7 164 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 PDZD9Q8IXQ8 264 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 OR5R1Q8NH85 324 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 PPP1R14AQ96A00 147 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 SPSB4Q96A44 273 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 FAM46AQ96IP4 442 aaKnown RBP5.97□□□□□ -1.45
YBX3-209ENST00000540747 DHRS1Q96LJ7 313 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 NSMCE2Q96MF7 247 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 SLC29A1Q99808 456 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 CIB1Q99828 191 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 TLNRD1Q9H1K6 362 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 RERGLQ9H628 205 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 MRPL22Q9NWU5 206 aaKnown RBP5.97□□□□□ -1.45
YBX3-209ENST00000540747 C1orf123Q9NWV4 160 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 POLR1DQ9Y2S0 133 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 SIGLEC9Q9Y336 463 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 ENPP4Q9Y6X5 453 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 SACSQ9NZJ4 4579 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 BIRC6Q9NR09 4857 aa5.97□□□□□ -1.45
YBX3-209ENST00000540747 IGHV3OR15-7A0A075B7D8 119 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 ADARB2-AS1A8MUL3 147 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 F5H5K5 113 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 M0R135 149 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 LCATP04180 440 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 TFAP2AP05549 437 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 MUC1P15941 1255 aaPredicted RBP5.96□□□□□ -1.46
YBX3-209ENST00000540747 SAA4P35542 130 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 LOXL3P58215 753 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 GUCA2AQ02747 115 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 PRB3Q04118 309 aaPredicted RBP5.96□□□□□ -1.46
YBX3-209ENST00000540747 POU4F2Q12837 409 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 MALLQ13021 153 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 KLRD1Q13241 179 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 ATP6AP1Q15904 470 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 RFX4Q33E94 735 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 IFI44LQ53G44 452 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 WDR38Q5JTN6 314 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 GLYATL3Q5SZD4 288 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 STUMQ69YW2 141 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 GLYATQ6IB77 296 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 C11orf88Q6PI97 169 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 DNM1P34Q6PK57 102 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 C1orf122Q6ZSJ8 110 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 Q6ZTK2 550 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 MRPL21Q7Z2W9 205 aaKnown RBP5.96□□□□□ -1.46
YBX3-209ENST00000540747 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.96□□□□□ -1.46
YBX3-209ENST00000540747 ADGRG5Q8IZF4 528 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 PNKDQ8N490 385 aa5.96□□□□□ -1.46
YBX3-209ENST00000540747 CBR4Q8N4T8 237 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms