RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 RAB3BP20337 219 aa9.12□□□□□ -0.95
ATL3-204ENST00000540699 CFL1P23528 166 aaKnown RBP9.12□□□□□ -0.95
ATL3-204ENST00000540699 BMXP51813 675 aa9.12□□□□□ -0.95
ATL3-204ENST00000540699 TPTEP56180 551 aa9.12□□□□□ -0.95
ATL3-204ENST00000540699 GALK2Q01415 458 aa9.12□□□□□ -0.95
ATL3-204ENST00000540699 SPOCK1Q08629 439 aa9.12□□□□□ -0.95
ATL3-204ENST00000540699 DYNC1I2Q13409 638 aaKnown RBP9.12□□□□□ -0.95
ATL3-204ENST00000540699 ZNF672Q499Z4 452 aaPredicted RBP9.12□□□□□ -0.95
ATL3-204ENST00000540699 SFXN4Q6P4A7 337 aa9.12□□□□□ -0.95
ATL3-204ENST00000540699 COLCA1Q6ZS62 124 aa9.12□□□□□ -0.95
ATL3-204ENST00000540699 FAM57BQ71RH2 274 aa9.12□□□□□ -0.95
ATL3-204ENST00000540699 OR51E1Q8TCB6 317 aa9.12□□□□□ -0.95
ATL3-204ENST00000540699 TSEN15Q8WW01 171 aaKnown RBP9.12□□□□□ -0.95
ATL3-204ENST00000540699 IGFBPL1Q8WX77 278 aa9.12□□□□□ -0.95
ATL3-204ENST00000540699 MS4A3Q96HJ5 214 aa9.12□□□□□ -0.95
ATL3-204ENST00000540699 PGAM5Q96HS1 289 aa9.12□□□□□ -0.95
ATL3-204ENST00000540699 LYZL4Q96KX0 146 aa9.12□□□□□ -0.95
ATL3-204ENST00000540699 WDFY2Q96P53 400 aa9.12□□□□□ -0.95
ATL3-204ENST00000540699 SLC30A2Q9BRI3 323 aa9.12□□□□□ -0.95
ATL3-204ENST00000540699 SOX7Q9BT81 388 aa9.12□□□□□ -0.95
ATL3-204ENST00000540699 C6orf62Q9GZU0 229 aaPredicted RBP9.12□□□□□ -0.95
ATL3-204ENST00000540699 MIXL1Q9H2W2 232 aa9.12□□□□□ -0.95
ATL3-204ENST00000540699 FOXJ3Q9UPW0 622 aa9.12□□□□□ -0.95
ATL3-204ENST00000540699 DHDHQ9UQ10 334 aa9.12□□□□□ -0.95
ATL3-204ENST00000540699 PEX16Q9Y5Y5 336 aa9.12□□□□□ -0.95
ATL3-204ENST00000540699 USF3Q68DE3 2245 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 LOC100509620A0A075B734 347 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 A0A1B0GVI7 797 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 ATP6V1G2-DDX39BF2Z307 99 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 CTDSP2O14595 271 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 PDCD5O14737 125 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 HS3ST1O14792 307 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 SYT7O43581 403 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 LMX1BO60663 402 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 ICMTO60725 284 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 CRYAAP02489 173 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 CD2P06729 351 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 CD37P11049 281 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 ATF1P18846 271 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 APEX1P27695 318 aaKnown RBP9.11□□□□□ -0.95
ATL3-204ENST00000540699 CFPP27918 469 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 CALCRP30988 508 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 ETV6P41212 452 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 ART1P52961 327 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 NKX6-1P78426 367 aaPredicted RBP9.11□□□□□ -0.95
ATL3-204ENST00000540699 SNAI3Q3KNW1 292 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 ZNF529Q6P280 563 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 C20orf204Q6ZNR8 217 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 DOK3Q7L591 496 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 CCDC190Q86UF4 302 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 CROCCP3Q8IVE0 287 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 PARP16Q8N5Y8 322 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 ZNF611Q8N823 705 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 NUP37Q8NFH4 326 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 OR52H1Q8NGJ2 320 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 OR1J2Q8NGS2 313 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 OR13C3Q8NGS6 347 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 OR14K1Q8NGZ2 314 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 AP3S1Q92572 193 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 NRGNQ92686 78 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 NEUROG1Q92886 237 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 KCTD12Q96CX2 325 aaKnown RBP9.11□□□□□ -0.95
ATL3-204ENST00000540699 C1QTNF5Q9BXJ0 243 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 RNF121Q9H920 327 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 TCF7L1Q9HCS4 588 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 GPR84Q9NQS5 396 aa9.11□□□□□ -0.95
ATL3-204ENST00000540699 ZNF275Q9NSD4 429 aaPredicted RBP9.11□□□□□ -0.95
ATL3-204ENST00000540699 CHD3Q12873 2000 aaKnown RBP9.1□□□□□ -0.95
ATL3-204ENST00000540699 E7EQL1 145 aa9.1□□□□□ -0.95
ATL3-204ENST00000540699 TMEM127O75204 238 aa9.1□□□□□ -0.95
ATL3-204ENST00000540699 DANCRP0C864 163 aa9.1□□□□□ -0.95
ATL3-204ENST00000540699 DDOSTP39656 456 aa9.1□□□□□ -0.95
ATL3-204ENST00000540699 SLC6A9P48067 706 aa9.1□□□□□ -0.95
ATL3-204ENST00000540699 PLP2Q04941 152 aa9.1□□□□□ -0.95
ATL3-204ENST00000540699 SLC22A25Q6T423 547 aa9.1□□□□□ -0.95
ATL3-204ENST00000540699 LYPD6Q86Y78 171 aa9.1□□□□□ -0.95
ATL3-204ENST00000540699 CCDC54Q8NEL0 328 aa9.1□□□□□ -0.95
ATL3-204ENST00000540699 SLC30A7Q8NEW0 376 aa9.1□□□□□ -0.95
ATL3-204ENST00000540699 S100ZQ8WXG8 99 aa9.1□□□□□ -0.95
ATL3-204ENST00000540699 ACOT12Q8WYK0 555 aa9.1□□□□□ -0.95
ATL3-204ENST00000540699 AKAP1Q92667 903 aaKnown RBP eCLIP9.1□□□□□ -0.95
ATL3-204ENST00000540699 ADAT3Q96EY9 351 aaPredicted RBP9.1□□□□□ -0.95
ATL3-204ENST00000540699 POM121L2Q96KW2 1035 aa9.1□□□□□ -0.95
ATL3-204ENST00000540699 SLITRK2Q9H156 845 aa9.1□□□□□ -0.95
ATL3-204ENST00000540699 OR10A2Q9H208 303 aa9.1□□□□□ -0.95
ATL3-204ENST00000540699 TAS2R4Q9NYW5 299 aa9.1□□□□□ -0.95
ATL3-204ENST00000540699 CISD1Q9NZ45 108 aaKnown RBP9.1□□□□□ -0.95
ATL3-204ENST00000540699 AK6Q9Y3D8 172 aaKnown RBP9.1□□□□□ -0.95
ATL3-204ENST00000540699 CMAHPQ9Y471 501 aa9.1□□□□□ -0.95
ATL3-204ENST00000540699 V9GYS6 101 aa9.1□□□□□ -0.95
ATL3-204ENST00000540699 LOC390937A0A1W2PQ73 354 aa9.09□□□□□ -0.95
ATL3-204ENST00000540699 IFITM5A6NNB3 132 aa9.09□□□□□ -0.95
ATL3-204ENST00000540699 CLDN25C9JDP6 229 aa9.09□□□□□ -0.95
ATL3-204ENST00000540699 AIPO00170 330 aa9.09□□□□□ -0.95
ATL3-204ENST00000540699 DHRS3O75911 302 aa9.09□□□□□ -0.95
ATL3-204ENST00000540699 SLC2A2P11168 524 aaPredicted RBP9.09□□□□□ -0.95
ATL3-204ENST00000540699 ZNF12P17014 697 aa9.09□□□□□ -0.95
ATL3-204ENST00000540699 HOXB4P17483 251 aaPredicted RBP9.09□□□□□ -0.95
ATL3-204ENST00000540699 STOMP27105 288 aa9.09□□□□□ -0.95
ATL3-204ENST00000540699 S100A5P33763 92 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms