RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 C3orf56Q8N813 242 aa17.42■□□□□ 0.38
CHFR-217ENST00000540537 BBS1Q8NFJ9 593 aa17.42■□□□□ 0.38
CHFR-217ENST00000540537 OR1M1Q8NGA1 313 aa17.42■□□□□ 0.38
CHFR-217ENST00000540537 C1orf147Q96MC9 270 aaPredicted RBP17.42■□□□□ 0.38
CHFR-217ENST00000540537 PAPOLGQ9BWT3 736 aaKnown RBP17.42■□□□□ 0.38
CHFR-217ENST00000540537 KIF17Q9P2E2 1029 aa17.42■□□□□ 0.38
CHFR-217ENST00000540537 KAAG1Q9UBP8 84 aa17.42■□□□□ 0.38
CHFR-217ENST00000540537 RHBDD3Q9Y3P4 386 aa17.42■□□□□ 0.38
CHFR-217ENST00000540537 GYPAP02724 150 aa17.41■□□□□ 0.38
CHFR-217ENST00000540537 LIPFP07098 398 aa17.41■□□□□ 0.38
CHFR-217ENST00000540537 EGR1P18146 543 aa17.41■□□□□ 0.38
CHFR-217ENST00000540537 ALOX5APP20292 161 aa17.41■□□□□ 0.38
CHFR-217ENST00000540537 CRISP1P54107 249 aa17.41■□□□□ 0.38
CHFR-217ENST00000540537 IL5RAQ01344 420 aa17.41■□□□□ 0.38
CHFR-217ENST00000540537 C11orf91Q3C1V1 193 aa17.41■□□□□ 0.38
CHFR-217ENST00000540537 FAHD1Q6P587 224 aa17.41■□□□□ 0.38
CHFR-217ENST00000540537 UTP4Q969X6 686 aaKnown RBP17.41■□□□□ 0.38
CHFR-217ENST00000540537 YIPF3Q9GZM5 350 aa17.41■□□□□ 0.38
CHFR-217ENST00000540537 TLNRD1Q9H1K6 362 aa17.41■□□□□ 0.38
CHFR-217ENST00000540537 ABCB9Q9NP78 766 aa17.41■□□□□ 0.38
CHFR-217ENST00000540537 PAPOLBQ9NRJ5 636 aaKnown RBP17.41■□□□□ 0.38
CHFR-217ENST00000540537 ZNF391Q9UJN7 358 aa17.41■□□□□ 0.38
CHFR-217ENST00000540537 LAMP5Q9UJQ1 280 aa17.41■□□□□ 0.38
CHFR-217ENST00000540537 KLHDC2Q9Y2U9 406 aa17.41■□□□□ 0.38
CHFR-217ENST00000540537 ANXA2P2A6NMY6 339 aa17.4■□□□□ 0.38
CHFR-217ENST00000540537 CLDN34H7C241 214 aa17.4■□□□□ 0.38
CHFR-217ENST00000540537 GSC2O15499 205 aa17.4■□□□□ 0.38
CHFR-217ENST00000540537 HKR1P10072 659 aa17.4■□□□□ 0.38
CHFR-217ENST00000540537 MUC1P15941 1255 aaPredicted RBP17.4■□□□□ 0.38
CHFR-217ENST00000540537 CFHR2P36980 270 aa17.4■□□□□ 0.38
CHFR-217ENST00000540537 BPIFB3P59826 476 aa17.4■□□□□ 0.38
CHFR-217ENST00000540537 APOFQ13790 326 aa17.4■□□□□ 0.38
CHFR-217ENST00000540537 SNAPC1Q16533 368 aa17.4■□□□□ 0.38
CHFR-217ENST00000540537 AWAT1Q58HT5 328 aa17.4■□□□□ 0.38
CHFR-217ENST00000540537 GALNT4Q8N4A0 578 aa17.4■□□□□ 0.38
CHFR-217ENST00000540537 LRRC29Q8WV35 223 aa17.4■□□□□ 0.38
CHFR-217ENST00000540537 ITPKCQ96DU7 683 aa17.4■□□□□ 0.38
CHFR-217ENST00000540537 DUX5Q96PT3 197 aa17.4■□□□□ 0.38
CHFR-217ENST00000540537 MICU1Q9BPX6 476 aa17.4■□□□□ 0.38
CHFR-217ENST00000540537 CADM1Q9BY67 442 aaKnown RBP17.4■□□□□ 0.38
CHFR-217ENST00000540537 SMURF1Q9HCE7 757 aa17.4■□□□□ 0.38
CHFR-217ENST00000540537 LRP12Q9Y561 859 aa17.4■□□□□ 0.38
CHFR-217ENST00000540537 MPC1Q9Y5U8 109 aa17.4■□□□□ 0.38
CHFR-217ENST00000540537 ZNF879B4DU55 563 aa17.39■□□□□ 0.37
CHFR-217ENST00000540537 P2RY10O00398 339 aa17.39■□□□□ 0.37
CHFR-217ENST00000540537 RNASE1P07998 156 aaKnown RBP17.39■□□□□ 0.37
CHFR-217ENST00000540537 ACKR3P25106 362 aa17.39■□□□□ 0.37
CHFR-217ENST00000540537 CSNK2BP67870 215 aa17.39■□□□□ 0.37
CHFR-217ENST00000540537 FOXL1Q12952 345 aa17.39■□□□□ 0.37
CHFR-217ENST00000540537 MICBQ29980 383 aa17.39■□□□□ 0.37
CHFR-217ENST00000540537 GPR157Q5UAW9 335 aa17.39■□□□□ 0.37
CHFR-217ENST00000540537 DEGS2Q6QHC5 323 aa17.39■□□□□ 0.37
CHFR-217ENST00000540537 WDR82Q6UXN9 313 aa17.39■□□□□ 0.37
CHFR-217ENST00000540537 PNLDC1Q8NA58 520 aaKnown RBP17.39■□□□□ 0.37
CHFR-217ENST00000540537 OR8B12Q8NGG6 310 aa17.39■□□□□ 0.37
CHFR-217ENST00000540537 OR5K1Q8NHB7 308 aa17.39■□□□□ 0.37
CHFR-217ENST00000540537 RTL8AQ9BWD3 113 aa17.39■□□□□ 0.37
CHFR-217ENST00000540537 PPP1R3EQ9H7J1 279 aa17.39■□□□□ 0.37
CHFR-217ENST00000540537 TVP23BQ9NYZ1 205 aa17.39■□□□□ 0.37
CHFR-217ENST00000540537 IGHV3OR15-7A0A075B7D8 119 aa17.38■□□□□ 0.37
CHFR-217ENST00000540537 CCDC182A6NF36 153 aa17.38■□□□□ 0.37
CHFR-217ENST00000540537 CST4P01036 141 aa17.38■□□□□ 0.37
CHFR-217ENST00000540537 DAPP51397 102 aa17.38■□□□□ 0.37
CHFR-217ENST00000540537 BNIP1Q12981 228 aa17.38■□□□□ 0.37
CHFR-217ENST00000540537 SLC9A3R2Q15599 337 aa17.38■□□□□ 0.37
CHFR-217ENST00000540537 LCN1P1Q5VSP4 162 aa17.38■□□□□ 0.37
CHFR-217ENST00000540537 KCTD18Q6PI47 426 aaPredicted RBP17.38■□□□□ 0.37
CHFR-217ENST00000540537 KRT77Q7Z794 578 aa17.38■□□□□ 0.37
CHFR-217ENST00000540537 SLC25A28Q96A46 364 aa17.38■□□□□ 0.37
CHFR-217ENST00000540537 LYZL4Q96KX0 146 aa17.38■□□□□ 0.37
CHFR-217ENST00000540537 TEAD3Q99594 435 aa17.38■□□□□ 0.37
CHFR-217ENST00000540537 PRRG3Q9BZD7 231 aa17.38■□□□□ 0.37
CHFR-217ENST00000540537 SOX21Q9Y651 276 aaPredicted RBP17.38■□□□□ 0.37
CHFR-217ENST00000540537 ACOD1A6NK06 481 aa17.37■□□□□ 0.37
CHFR-217ENST00000540537 TMEM210A6NLX4 147 aa17.37■□□□□ 0.37
CHFR-217ENST00000540537 SRRM5B3KS81 715 aa17.37■□□□□ 0.37
CHFR-217ENST00000540537 DVL1O14640 695 aa17.37■□□□□ 0.37
CHFR-217ENST00000540537 CDIPTO14735 213 aa17.37■□□□□ 0.37
CHFR-217ENST00000540537 TMPRSS2O15393 492 aa17.37■□□□□ 0.37
CHFR-217ENST00000540537 FCN3O75636 299 aa17.37■□□□□ 0.37
CHFR-217ENST00000540537 ECDO95905 644 aaPredicted RBP17.37■□□□□ 0.37
CHFR-217ENST00000540537 MMP9P14780 707 aa17.37■□□□□ 0.37
CHFR-217ENST00000540537 ESRRGP62508 458 aa17.37■□□□□ 0.37
CHFR-217ENST00000540537 PRDX4Q13162 271 aa17.37■□□□□ 0.37
CHFR-217ENST00000540537 OR5P3Q8WZ94 311 aa17.37■□□□□ 0.37
CHFR-217ENST00000540537 ITFG2Q969R8 447 aa17.37■□□□□ 0.37
CHFR-217ENST00000540537 C12orf43Q96C57 262 aaKnown RBP17.37■□□□□ 0.37
CHFR-217ENST00000540537 PCGF1Q9BSM1 259 aa17.37■□□□□ 0.37
CHFR-217ENST00000540537 RASSF4Q9H2L5 321 aa17.37■□□□□ 0.37
CHFR-217ENST00000540537 PRDM13Q9H4Q3 707 aa17.37■□□□□ 0.37
CHFR-217ENST00000540537 ZNF850A8MQ14 1090 aa17.36■□□□□ 0.37
CHFR-217ENST00000540537 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.36■□□□□ 0.37
CHFR-217ENST00000540537 TOX4O94842 621 aa17.36■□□□□ 0.37
CHFR-217ENST00000540537 HCCSP53701 268 aa17.36■□□□□ 0.37
CHFR-217ENST00000540537 POU4F2Q12837 409 aa17.36■□□□□ 0.37
CHFR-217ENST00000540537 PTGES3Q15185 160 aaKnown RBP17.36■□□□□ 0.37
CHFR-217ENST00000540537 ATP6AP1Q15904 470 aa17.36■□□□□ 0.37
CHFR-217ENST00000540537 METTL11BQ5VVY1 283 aa17.36■□□□□ 0.37
CHFR-217ENST00000540537 BRD3OSQ6XYD6 125 aa17.36■□□□□ 0.37
CHFR-217ENST00000540537 BTN2A1Q7KYR7 527 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms