RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 CSNK2BP67870 215 aa9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 POU4F2Q12837 409 aa9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 TIGD6Q17RP2 521 aa9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 LRRC10Q5BKY1 277 aa9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 DUX4L9Q6RFH8 374 aaPredicted RBP9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 C1orf122Q6ZSJ8 110 aa9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 PDZD9Q8IXQ8 264 aa9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 FTMTQ8N4E7 242 aa9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 FAM216BQ8N7L0 139 aa9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 CSNK2A3Q8NEV1 391 aa9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 OR52H1Q8NGJ2 320 aa9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 OR8D4Q8NGM9 314 aa9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 OR9Q1Q8NGQ5 310 aa9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 OR10Z1Q8NGY1 313 aa9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 SGK3Q96BR1 496 aa9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 REEP6Q96HR9 211 aa9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 BTBD10Q9BSF8 475 aa9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 DCTN5Q9BTE1 182 aa9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 ABCB9Q9NP78 766 aa9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 DUX4Q9UBX2 424 aa9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 N6AMT1Q9Y5N5 214 aa9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 LYVE1Q9Y5Y7 322 aa9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 NOTCH1P46531 2555 aa9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 DHRS12A0PJE2 317 aa9.85□□□□□ -0.83
CBX3P4-202ENST00000540428 ANXA2P2A6NMY6 339 aa9.85□□□□□ -0.83
CBX3P4-202ENST00000540428 RNASEK-C17orf49H0YIS7 233 aa9.85□□□□□ -0.83
CBX3P4-202ENST00000540428 ACOT8O14734 319 aa9.85□□□□□ -0.83
CBX3P4-202ENST00000540428 NPFFO15130 113 aa9.85□□□□□ -0.83
CBX3P4-202ENST00000540428 ARPC2O15144 300 aa9.85□□□□□ -0.83
CBX3P4-202ENST00000540428 ANXA2P07355 339 aaKnown RBP9.85□□□□□ -0.83
CBX3P4-202ENST00000540428 SPI1P17947 270 aa9.85□□□□□ -0.83
CBX3P4-202ENST00000540428 AMY2BP19961 511 aa9.85□□□□□ -0.83
CBX3P4-202ENST00000540428 HSD11B1P28845 292 aa9.85□□□□□ -0.83
CBX3P4-202ENST00000540428 GNALP38405 381 aa9.85□□□□□ -0.83
CBX3P4-202ENST00000540428 IL5RAQ01344 420 aa9.85□□□□□ -0.83
CBX3P4-202ENST00000540428 ACSM1Q08AH1 577 aa9.85□□□□□ -0.83
CBX3P4-202ENST00000540428 CRMP1Q14194 572 aa9.85□□□□□ -0.83
CBX3P4-202ENST00000540428 SAMD4BQ5PRF9 694 aaKnown RBP9.85□□□□□ -0.83
CBX3P4-202ENST00000540428 NCR3LG1Q68D85 454 aa9.85□□□□□ -0.83
CBX3P4-202ENST00000540428 STUMQ69YW2 141 aa9.85□□□□□ -0.83
CBX3P4-202ENST00000540428 ZNF770Q6IQ21 691 aaPredicted RBP9.85□□□□□ -0.83
CBX3P4-202ENST00000540428 PRSS45Q7RTY3 260 aa9.85□□□□□ -0.83
CBX3P4-202ENST00000540428 PGAM4Q8N0Y7 254 aa9.85□□□□□ -0.83
CBX3P4-202ENST00000540428 FGFRL1Q8N441 504 aa9.85□□□□□ -0.83
CBX3P4-202ENST00000540428 Q8N7P7 452 aa9.85□□□□□ -0.83
CBX3P4-202ENST00000540428 ZNF511Q8NB15 262 aa9.85□□□□□ -0.83
CBX3P4-202ENST00000540428 OR9Q2Q8NGE9 314 aa9.85□□□□□ -0.83
CBX3P4-202ENST00000540428 TNFRSF14Q92956 283 aa9.85□□□□□ -0.83
CBX3P4-202ENST00000540428 MICU1Q9BPX6 476 aa9.85□□□□□ -0.83
CBX3P4-202ENST00000540428 TSSK6Q9BXA6 273 aa9.85□□□□□ -0.83
CBX3P4-202ENST00000540428 RGCCQ9H4X1 137 aa9.85□□□□□ -0.83
CBX3P4-202ENST00000540428 SIRT7Q9NRC8 400 aa9.85□□□□□ -0.83
CBX3P4-202ENST00000540428 TBC1D23Q9NUY8 699 aa9.85□□□□□ -0.83
CBX3P4-202ENST00000540428 FBLN5Q9UBX5 448 aa9.85□□□□□ -0.83
CBX3P4-202ENST00000540428 MPC1Q9Y5U8 109 aa9.85□□□□□ -0.83
CBX3P4-202ENST00000540428 PRKDCP78527 4128 aaKnown RBP9.85□□□□□ -0.83
CBX3P4-202ENST00000540428 ZNF816-ZNF321PA0A0X1KG74 233 aa9.84□□□□□ -0.83
CBX3P4-202ENST00000540428 NKX6-3A6NJ46 265 aa9.84□□□□□ -0.83
CBX3P4-202ENST00000540428 TMEM210A6NLX4 147 aa9.84□□□□□ -0.83
CBX3P4-202ENST00000540428 M0R1W7 72 aa9.84□□□□□ -0.83
CBX3P4-202ENST00000540428 TNFRSF11BO00300 401 aa9.84□□□□□ -0.83
CBX3P4-202ENST00000540428 CDIPTO14735 213 aa9.84□□□□□ -0.83
CBX3P4-202ENST00000540428 CCNB2O95067 398 aa9.84□□□□□ -0.83
CBX3P4-202ENST00000540428 PAHP00439 452 aa9.84□□□□□ -0.83
CBX3P4-202ENST00000540428 GASTP01350 101 aa9.84□□□□□ -0.83
CBX3P4-202ENST00000540428 IFNGP01579 166 aa9.84□□□□□ -0.83
CBX3P4-202ENST00000540428 CSF1P09603 554 aa9.84□□□□□ -0.83
CBX3P4-202ENST00000540428 GSK3AP49840 483 aa9.84□□□□□ -0.83
CBX3P4-202ENST00000540428 UBE2E1P51965 193 aa9.84□□□□□ -0.83
CBX3P4-202ENST00000540428 ELF3P78545 371 aaPredicted RBP9.84□□□□□ -0.83
CBX3P4-202ENST00000540428 IKZF1Q13422 519 aa9.84□□□□□ -0.83
CBX3P4-202ENST00000540428 EIF2B1Q14232 305 aaKnown RBP9.84□□□□□ -0.83
CBX3P4-202ENST00000540428 SPATS1Q496A3 300 aa9.84□□□□□ -0.83
CBX3P4-202ENST00000540428 KLHL12Q53G59 568 aa9.84□□□□□ -0.83
CBX3P4-202ENST00000540428 HSP90B2PQ58FF3 399 aa9.84□□□□□ -0.83
CBX3P4-202ENST00000540428 LINC01590Q5TEZ4 76 aa9.84□□□□□ -0.83
CBX3P4-202ENST00000540428 C11orf88Q6PI97 169 aa9.84□□□□□ -0.83
CBX3P4-202ENST00000540428 ZNF788Q6ZQV5 615 aa9.84□□□□□ -0.83
CBX3P4-202ENST00000540428 OR2T33Q8NG76 320 aa9.84□□□□□ -0.83
CBX3P4-202ENST00000540428 OR6K6Q8NGW6 343 aa9.84□□□□□ -0.83
CBX3P4-202ENST00000540428 RNF133Q8WVZ7 376 aa9.84□□□□□ -0.83
CBX3P4-202ENST00000540428 ITPKCQ96DU7 683 aa9.84□□□□□ -0.83
CBX3P4-202ENST00000540428 MED30Q96HR3 178 aa9.84□□□□□ -0.83
CBX3P4-202ENST00000540428 RAB3IPQ96QF0 476 aaPredicted RBP9.84□□□□□ -0.83
CBX3P4-202ENST00000540428 RTL8AQ9BWD3 113 aa9.84□□□□□ -0.83
CBX3P4-202ENST00000540428 PAPOLGQ9BWT3 736 aaKnown RBP9.84□□□□□ -0.83
CBX3P4-202ENST00000540428 OR10A2Q9H208 303 aa9.84□□□□□ -0.83
CBX3P4-202ENST00000540428 SEMA6AQ9H2E6 1030 aa9.84□□□□□ -0.83
CBX3P4-202ENST00000540428 HAO2Q9NYQ3 351 aa9.84□□□□□ -0.83
CBX3P4-202ENST00000540428 ANKRD61A6NGH8 418 aa9.83□□□□□ -0.84
CBX3P4-202ENST00000540428 GYPBP06028 91 aa9.83□□□□□ -0.84
CBX3P4-202ENST00000540428 ZNF3P17036 446 aa9.83□□□□□ -0.84
CBX3P4-202ENST00000540428 MAGEA2P43356 314 aa9.83□□□□□ -0.84
CBX3P4-202ENST00000540428 CAV3P56539 151 aa9.83□□□□□ -0.84
CBX3P4-202ENST00000540428 ZNF121P58317 390 aaPredicted RBP9.83□□□□□ -0.84
CBX3P4-202ENST00000540428 MXRA7P84157 204 aa9.83□□□□□ -0.84
CBX3P4-202ENST00000540428 EGR3Q06889 387 aa9.83□□□□□ -0.84
CBX3P4-202ENST00000540428 FAM76BQ5HYJ3 339 aa9.83□□□□□ -0.84
CBX3P4-202ENST00000540428 FAM57BQ71RH2 274 aa9.83□□□□□ -0.84
CBX3P4-202ENST00000540428 SHFQ7M4L6 423 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms