RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 CTF1Q16619 201 aa16.19■□□□□ 0.18
TNFRSF1A-213ENST00000540022 ZNF672Q499Z4 452 aaPredicted RBP16.19■□□□□ 0.18
TNFRSF1A-213ENST00000540022 ASPHD2Q6ICH7 369 aa16.19■□□□□ 0.18
TNFRSF1A-213ENST00000540022 OR5AS1Q8N127 324 aa16.19■□□□□ 0.18
TNFRSF1A-213ENST00000540022 PARP16Q8N5Y8 322 aa16.19■□□□□ 0.18
TNFRSF1A-213ENST00000540022 BHLHE23Q8NDY6 225 aa16.19■□□□□ 0.18
TNFRSF1A-213ENST00000540022 MRPL24Q96A35 216 aaKnown RBP16.19■□□□□ 0.18
TNFRSF1A-213ENST00000540022 MRPL37Q9BZE1 423 aaKnown RBP16.19■□□□□ 0.18
TNFRSF1A-213ENST00000540022 PLEKHA1Q9HB21 404 aa16.19■□□□□ 0.18
TNFRSF1A-213ENST00000540022 DUSP13Q9UII6 198 aa16.19■□□□□ 0.18
TNFRSF1A-213ENST00000540022 PURGQ9UJV8 347 aaKnown RBP16.19■□□□□ 0.18
TNFRSF1A-213ENST00000540022 SPG11Q96JI7 2443 aa16.19■□□□□ 0.18
TNFRSF1A-213ENST00000540022 IGLV3-9A0A075B6K5 115 aa16.19■□□□□ 0.18
TNFRSF1A-213ENST00000540022 A0A1W2PPR1 153 aa16.19■□□□□ 0.18
TNFRSF1A-213ENST00000540022 UCHL1P09936 223 aa16.19■□□□□ 0.18
TNFRSF1A-213ENST00000540022 KITLGP21583 273 aa16.19■□□□□ 0.18
TNFRSF1A-213ENST00000540022 MAPK3P27361 379 aaPredicted RBP16.19■□□□□ 0.18
TNFRSF1A-213ENST00000540022 TGFBR1P36897 503 aa16.19■□□□□ 0.18
TNFRSF1A-213ENST00000540022 DDOSTP39656 456 aa16.19■□□□□ 0.18
TNFRSF1A-213ENST00000540022 GDPGP1Q6ZNW5 385 aa16.19■□□□□ 0.18
TNFRSF1A-213ENST00000540022 THRSPQ92748 146 aa16.19■□□□□ 0.18
TNFRSF1A-213ENST00000540022 SYT3Q9BQG1 590 aa16.19■□□□□ 0.18
TNFRSF1A-213ENST00000540022 PPP1R3EQ9H7J1 279 aa16.19■□□□□ 0.18
TNFRSF1A-213ENST00000540022 CISD1Q9NZ45 108 aaKnown RBP16.19■□□□□ 0.18
TNFRSF1A-213ENST00000540022 MYEF2Q9P2K5 600 aaKnown RBP16.19■□□□□ 0.18
TNFRSF1A-213ENST00000540022 RHBDD3Q9Y3P4 386 aa16.19■□□□□ 0.18
TNFRSF1A-213ENST00000540022 CADP27708 2225 aa16.18■□□□□ 0.18
TNFRSF1A-213ENST00000540022 IQCF6A8MYZ5 107 aa16.18■□□□□ 0.18
TNFRSF1A-213ENST00000540022 IGHV3-13P01766 116 aa16.18■□□□□ 0.18
TNFRSF1A-213ENST00000540022 RAF1P04049 648 aa16.18■□□□□ 0.18
TNFRSF1A-213ENST00000540022 OR4A8P0C604 315 aa16.18■□□□□ 0.18
TNFRSF1A-213ENST00000540022 SELEP16581 610 aa16.18■□□□□ 0.18
TNFRSF1A-213ENST00000540022 ZNF20P17024 532 aa16.18■□□□□ 0.18
TNFRSF1A-213ENST00000540022 KLF3P57682 345 aaPredicted RBP16.18■□□□□ 0.18
TNFRSF1A-213ENST00000540022 PAMR1Q6UXH9 720 aa16.18■□□□□ 0.18
TNFRSF1A-213ENST00000540022 SERPINA12Q8IW75 414 aa16.18■□□□□ 0.18
TNFRSF1A-213ENST00000540022 PHYHIPQ92561 330 aa16.18■□□□□ 0.18
TNFRSF1A-213ENST00000540022 ITFG2Q969R8 447 aa16.18■□□□□ 0.18
TNFRSF1A-213ENST00000540022 C10orf35Q96D05 121 aa16.18■□□□□ 0.18
TNFRSF1A-213ENST00000540022 C14orf79Q96F83 325 aa16.18■□□□□ 0.18
TNFRSF1A-213ENST00000540022 AKAP9Q99996 3911 aa16.17■□□□□ 0.18
TNFRSF1A-213ENST00000540022 AKAP6Q13023 2319 aa16.17■□□□□ 0.18
TNFRSF1A-213ENST00000540022 ANKRD17O75179 2603 aaKnown RBP16.17■□□□□ 0.18
TNFRSF1A-213ENST00000540022 TRAV8-7A0A075B6U6 113 aa16.17■□□□□ 0.18
TNFRSF1A-213ENST00000540022 ZNF816-ZNF321PA0A0X1KG74 233 aa16.17■□□□□ 0.18
TNFRSF1A-213ENST00000540022 SMIM31A0A1B0GVY4 71 aa16.17■□□□□ 0.18
TNFRSF1A-213ENST00000540022 SHISA3A0PJX4 238 aa16.17■□□□□ 0.18
TNFRSF1A-213ENST00000540022 FAM221AA4D161 298 aa16.17■□□□□ 0.18
TNFRSF1A-213ENST00000540022 A6NHS1 94 aa16.17■□□□□ 0.18
TNFRSF1A-213ENST00000540022 TIMM8AO60220 97 aaPredicted RBP16.17■□□□□ 0.18
TNFRSF1A-213ENST00000540022 CALRP27797 417 aaKnown RBP16.17■□□□□ 0.18
TNFRSF1A-213ENST00000540022 GNALP38405 381 aa16.17■□□□□ 0.18
TNFRSF1A-213ENST00000540022 TMBIM6P55061 237 aa16.17■□□□□ 0.18
TNFRSF1A-213ENST00000540022 VBP1P61758 197 aa16.17■□□□□ 0.18
TNFRSF1A-213ENST00000540022 NCS1P62166 190 aa16.17■□□□□ 0.18
TNFRSF1A-213ENST00000540022 HSD17B12Q53GQ0 312 aa16.17■□□□□ 0.18
TNFRSF1A-213ENST00000540022 DMRTC1Q5HYR2 192 aa16.17■□□□□ 0.18
TNFRSF1A-213ENST00000540022 ZBTB37Q5TC79 503 aa16.17■□□□□ 0.18
TNFRSF1A-213ENST00000540022 CSNK2A3Q8NEV1 391 aa16.17■□□□□ 0.18
TNFRSF1A-213ENST00000540022 ISOC1Q96CN7 298 aa16.17■□□□□ 0.18
TNFRSF1A-213ENST00000540022 TAS2R4Q9NYW5 299 aa16.17■□□□□ 0.18
TNFRSF1A-213ENST00000540022 GSTK1Q9Y2Q3 226 aa16.17■□□□□ 0.18
TNFRSF1A-213ENST00000540022 CCDC168Q8NDH2 2452 aa16.17■□□□□ 0.18
TNFRSF1A-213ENST00000540022 CCDC160A6NGH7 325 aa16.16■□□□□ 0.18
TNFRSF1A-213ENST00000540022 ARL6IP5O75915 188 aa16.16■□□□□ 0.18
TNFRSF1A-213ENST00000540022 GOSR1O95249 250 aa16.16■□□□□ 0.18
TNFRSF1A-213ENST00000540022 IGFBP3P17936 291 aaPredicted RBP16.16■□□□□ 0.18
TNFRSF1A-213ENST00000540022 SSTR2P30874 369 aa16.16■□□□□ 0.18
TNFRSF1A-213ENST00000540022 APOBEC3AP31941 199 aaPredicted RBP16.16■□□□□ 0.18
TNFRSF1A-213ENST00000540022 FOXB2Q5VYV0 432 aa16.16■□□□□ 0.18
TNFRSF1A-213ENST00000540022 TMEM42Q69YG0 159 aa16.16■□□□□ 0.18
TNFRSF1A-213ENST00000540022 KRT74Q7RTS7 529 aa16.16■□□□□ 0.18
TNFRSF1A-213ENST00000540022 OR13C9Q8NGT0 318 aa16.16■□□□□ 0.18
TNFRSF1A-213ENST00000540022 RAB2BQ8WUD1 216 aa16.16■□□□□ 0.18
TNFRSF1A-213ENST00000540022 PIGCQ92535 297 aa16.16■□□□□ 0.18
TNFRSF1A-213ENST00000540022 DHRS9Q9BPW9 319 aa16.16■□□□□ 0.18
TNFRSF1A-213ENST00000540022 ABCA4P78363 2273 aa16.16■□□□□ 0.18
TNFRSF1A-213ENST00000540022 GMDSO60547 372 aa16.15■□□□□ 0.18
TNFRSF1A-213ENST00000540022 CST4P01036 141 aa16.15■□□□□ 0.18
TNFRSF1A-213ENST00000540022 FSTP19883 344 aa16.15■□□□□ 0.18
TNFRSF1A-213ENST00000540022 SERPINF1P36955 418 aa16.15■□□□□ 0.18
TNFRSF1A-213ENST00000540022 UBE2V2Q15819 145 aa16.15■□□□□ 0.18
TNFRSF1A-213ENST00000540022 CLVS2Q5SYC1 327 aa16.15■□□□□ 0.18
TNFRSF1A-213ENST00000540022 OR8G5Q8NG78 346 aa16.15■□□□□ 0.18
TNFRSF1A-213ENST00000540022 OR51A2Q8NGJ7 313 aa16.15■□□□□ 0.18
TNFRSF1A-213ENST00000540022 OR5D14Q8NGL3 314 aa16.15■□□□□ 0.18
TNFRSF1A-213ENST00000540022 ZNF420Q8TAQ5 688 aaPredicted RBP16.15■□□□□ 0.18
TNFRSF1A-213ENST00000540022 UBASH3BQ8TF42 649 aa16.15■□□□□ 0.18
TNFRSF1A-213ENST00000540022 PP6455Q8WZ26 134 aa16.15■□□□□ 0.18
TNFRSF1A-213ENST00000540022 KCTD7Q96MP8 289 aa16.15■□□□□ 0.18
TNFRSF1A-213ENST00000540022 PAPOLGQ9BWT3 736 aaKnown RBP16.15■□□□□ 0.18
TNFRSF1A-213ENST00000540022 CHST5Q9GZS9 411 aa16.15■□□□□ 0.18
TNFRSF1A-213ENST00000540022 PLK3Q9H4B4 646 aa16.15■□□□□ 0.18
TNFRSF1A-213ENST00000540022 BATF3Q9NR55 127 aa16.15■□□□□ 0.18
TNFRSF1A-213ENST00000540022 GPR173Q9NS66 373 aa16.15■□□□□ 0.18
TNFRSF1A-213ENST00000540022 MRPL15Q9P015 296 aaKnown RBP16.15■□□□□ 0.18
TNFRSF1A-213ENST00000540022 NDUFA13Q9P0J0 144 aa16.15■□□□□ 0.18
TNFRSF1A-213ENST00000540022 GPR160Q9UJ42 338 aa16.15■□□□□ 0.18
TNFRSF1A-213ENST00000540022 IGKV1-9A0A0C4DH69 117 aa16.14■□□□□ 0.18
TNFRSF1A-213ENST00000540022 ANKRD30BLA7E2S9 258 aa16.14■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms