RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 ANGPTL7O43827 346 aa12.36□□□□□ -0.43
UBE3B-210ENST00000539599 RSPO1Q2MKA7 263 aaPredicted RBP12.36□□□□□ -0.43
UBE3B-210ENST00000539599 HLA-BQ31612 363 aa12.36□□□□□ -0.43
UBE3B-210ENST00000539599 ANKRD55Q3KP44 614 aa12.36□□□□□ -0.43
UBE3B-210ENST00000539599 OVCH2Q7RTZ1 564 aa12.36□□□□□ -0.43
UBE3B-210ENST00000539599 PTX4Q96A99 478 aa12.36□□□□□ -0.43
UBE3B-210ENST00000539599 UQCC2Q9BRT2 126 aa12.36□□□□□ -0.43
UBE3B-210ENST00000539599 TMEM231Q9H6L2 316 aa12.36□□□□□ -0.43
UBE3B-210ENST00000539599 OR5AC2Q9NZP5 309 aa12.36□□□□□ -0.43
UBE3B-210ENST00000539599 A0A0A6YYH2 397 aa12.36□□□□□ -0.43
UBE3B-210ENST00000539599 A6NJ64 397 aa12.36□□□□□ -0.43
UBE3B-210ENST00000539599 F12P00748 615 aaPredicted RBP12.36□□□□□ -0.43
UBE3B-210ENST00000539599 PDGFBP01127 241 aaPredicted RBP12.36□□□□□ -0.43
UBE3B-210ENST00000539599 IL2RAP01589 272 aa12.36□□□□□ -0.43
UBE3B-210ENST00000539599 PDCD1Q15116 288 aa12.36□□□□□ -0.43
UBE3B-210ENST00000539599 SNAI3Q3KNW1 292 aa12.36□□□□□ -0.43
UBE3B-210ENST00000539599 CARFQ8N187 725 aa12.36□□□□□ -0.43
UBE3B-210ENST00000539599 OR13G1Q8NGZ3 307 aa12.36□□□□□ -0.43
UBE3B-210ENST00000539599 RNF138Q8WVD3 245 aa12.36□□□□□ -0.43
UBE3B-210ENST00000539599 OXGR1Q96P68 337 aa12.36□□□□□ -0.43
UBE3B-210ENST00000539599 CHRDQ9H2X0 955 aa12.36□□□□□ -0.43
UBE3B-210ENST00000539599 GAREM1Q9H706 876 aa12.36□□□□□ -0.43
UBE3B-210ENST00000539599 ACKR4Q9NPB9 350 aa12.36□□□□□ -0.43
UBE3B-210ENST00000539599 SLC2A8Q9NY64 477 aa12.36□□□□□ -0.43
UBE3B-210ENST00000539599 TNFSF11O14788 317 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 DKK1O94907 266 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 KNG1P01042 644 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 CFIP05156 583 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 GLI4P10075 376 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 GABRR1P24046 479 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 NTF4P34130 210 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 STARD6P59095 220 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 RPS18P62269 152 aaKnown RBP12.35□□□□□ -0.43
UBE3B-210ENST00000539599 SUPT4H1P63272 117 aaKnown RBP12.35□□□□□ -0.43
UBE3B-210ENST00000539599 PCOLCEQ15113 449 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 KISS1Q15726 138 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 NKAPLQ5M9Q1 402 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 DRAM2Q6UX65 266 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 CLEC18BQ6UXF7 455 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 C6orf201Q7Z4U5 140 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 HOGA1Q86XE5 327 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 ZSCAN4Q8NAM6 433 aaPredicted RBP12.35□□□□□ -0.43
UBE3B-210ENST00000539599 OR52H1Q8NGJ2 320 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 OR14K1Q8NGZ2 314 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 OR6S1Q8NH40 331 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 OR6X1Q8NH79 312 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 OR10C1Q96KK4 312 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 ZNF160Q9HCG1 818 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 CHMP1AQ9HD42 196 aaPredicted RBP12.35□□□□□ -0.43
UBE3B-210ENST00000539599 PTRH2Q9Y3E5 179 aaKnown RBP12.35□□□□□ -0.43
UBE3B-210ENST00000539599 LAMA5O15230 3695 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 UMODP07911 640 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 HOXB5P09067 269 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 UBBP0CG47 229 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 AMY2BP19961 511 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 SPINK2P20155 84 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 PPIAP62937 165 aaKnown RBP12.35□□□□□ -0.43
UBE3B-210ENST00000539599 RPS27AP62979 156 aaKnown RBP12.35□□□□□ -0.43
UBE3B-210ENST00000539599 UBA52P62987 128 aaKnown RBP12.35□□□□□ -0.43
UBE3B-210ENST00000539599 CHAF1BQ13112 559 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 MAFAQ8NHW3 353 aaPredicted RBP12.35□□□□□ -0.43
UBE3B-210ENST00000539599 THAP6Q8TBB0 222 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 SAP25Q8TEE9 199 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 RNF126Q9BV68 326 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 SMOC1Q9H4F8 434 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 C12orf4Q9NQ89 552 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 OR2S2Q9NQN1 319 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 ZNF701Q9NV72 531 aaPredicted RBP12.35□□□□□ -0.43
UBE3B-210ENST00000539599 NPIPB13A6NJU9 1138 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 AQP7P3A6NL99 342 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 NPIPB4C9JG80 1138 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 ETV2O00321 342 aaPredicted RBP12.35□□□□□ -0.43
UBE3B-210ENST00000539599 MSTNO14793 375 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 HPNP05981 417 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 CRHP06850 196 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 FCGR2AP12318 317 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 BLVRBP30043 206 aaPredicted RBP12.35□□□□□ -0.43
UBE3B-210ENST00000539599 GPR85P60893 370 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 ENDOGQ14249 297 aaKnown RBP12.35□□□□□ -0.43
UBE3B-210ENST00000539599 SLC25A53Q5H9E4 307 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 ACOT7LQ6ZUV0 252 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 TERB2Q8NHR7 220 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 SLC22A8Q8TCC7 542 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 PAQR8Q8TEZ7 354 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 TMED6Q8WW62 240 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 MR1Q95460 341 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 PROK2Q9HC23 129 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 PRDM6Q9NQX0 595 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 GPR173Q9NS66 373 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 GSKIPQ9P0R6 139 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 PCDHB10Q9UN67 800 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 B3GALT1Q9Y5Z6 326 aa12.35□□□□□ -0.43
UBE3B-210ENST00000539599 FAM221AA4D161 298 aa12.34□□□□□ -0.43
UBE3B-210ENST00000539599 SPRY1O43609 319 aaPredicted RBP12.34□□□□□ -0.43
UBE3B-210ENST00000539599 SNU13P55769 128 aaKnown RBP12.34□□□□□ -0.43
UBE3B-210ENST00000539599 TAGLNQ01995 201 aaKnown RBP12.34□□□□□ -0.43
UBE3B-210ENST00000539599 HGFACQ04756 655 aa12.34□□□□□ -0.43
UBE3B-210ENST00000539599 ZNF273Q14593 569 aa12.34□□□□□ -0.43
UBE3B-210ENST00000539599 LYSMD4Q5XG99 296 aa12.34□□□□□ -0.43
UBE3B-210ENST00000539599 CLEC9AQ6UXN8 241 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms