RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 SWI5Q1ZZU3 235 aa17.94■□□□□ 0.46
TMEM260-203ENST00000539559 RSPO4Q2I0M5 234 aaPredicted RBP17.94■□□□□ 0.46
TMEM260-203ENST00000539559 OR5AS1Q8N127 324 aa17.94■□□□□ 0.46
TMEM260-203ENST00000539559 C1orf147Q96MC9 270 aaPredicted RBP17.94■□□□□ 0.46
TMEM260-203ENST00000539559 AMY2BP19961 511 aa17.94■□□□□ 0.46
TMEM260-203ENST00000539559 GPR85P60893 370 aa17.94■□□□□ 0.46
TMEM260-203ENST00000539559 CYCSP99999 105 aaKnown RBP17.94■□□□□ 0.46
TMEM260-203ENST00000539559 PEA15Q15121 130 aa17.94■□□□□ 0.46
TMEM260-203ENST00000539559 PCK2Q16822 640 aa17.94■□□□□ 0.46
TMEM260-203ENST00000539559 DEFB133Q30KQ1 61 aa17.94■□□□□ 0.46
TMEM260-203ENST00000539559 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.94■□□□□ 0.46
TMEM260-203ENST00000539559 DNM1P34Q6PK57 102 aa17.94■□□□□ 0.46
TMEM260-203ENST00000539559 OR5H2Q8NGV7 314 aa17.94■□□□□ 0.46
TMEM260-203ENST00000539559 AKR1E2Q96JD6 320 aa17.94■□□□□ 0.46
TMEM260-203ENST00000539559 GPER1Q99527 375 aa17.94■□□□□ 0.46
TMEM260-203ENST00000539559 SUSD2Q9UGT4 822 aa17.94■□□□□ 0.46
TMEM260-203ENST00000539559 A0A1W2PQD3 144 aa17.93■□□□□ 0.46
TMEM260-203ENST00000539559 COLCA2A8K830 154 aa17.93■□□□□ 0.46
TMEM260-203ENST00000539559 ACAA1P09110 424 aaPredicted RBP17.93■□□□□ 0.46
TMEM260-203ENST00000539559 CAV2P51636 162 aa17.93■□□□□ 0.46
TMEM260-203ENST00000539559 H1FNTQ75WM6 255 aaPredicted RBP17.93■□□□□ 0.46
TMEM260-203ENST00000539559 C14orf79Q96F83 325 aa17.93■□□□□ 0.46
TMEM260-203ENST00000539559 CLCC1Q96S66 551 aa17.93■□□□□ 0.46
TMEM260-203ENST00000539559 UQCC2Q9BRT2 126 aa17.93■□□□□ 0.46
TMEM260-203ENST00000539559 TAF9BQ9HBM6 251 aa17.93■□□□□ 0.46
TMEM260-203ENST00000539559 FANCFQ9NPI8 374 aa17.93■□□□□ 0.46
TMEM260-203ENST00000539559 EDARQ9UNE0 448 aa17.93■□□□□ 0.46
TMEM260-203ENST00000539559 ADAM10O14672 748 aa17.93■□□□□ 0.46
TMEM260-203ENST00000539559 CSTBP04080 98 aaKnown RBP17.93■□□□□ 0.46
TMEM260-203ENST00000539559 HABP2Q14520 560 aaPredicted RBP17.93■□□□□ 0.46
TMEM260-203ENST00000539559 AADACL3Q5VUY0 350 aa17.93■□□□□ 0.46
TMEM260-203ENST00000539559 IL34Q6ZMJ4 242 aa17.93■□□□□ 0.46
TMEM260-203ENST00000539559 C1QL2Q7Z5L3 287 aa17.93■□□□□ 0.46
TMEM260-203ENST00000539559 TMEM59Q9BXS4 323 aa17.93■□□□□ 0.46
TMEM260-203ENST00000539559 SLC26A1Q9H2B4 701 aa17.93■□□□□ 0.46
TMEM260-203ENST00000539559 GPR84Q9NQS5 396 aa17.93■□□□□ 0.46
TMEM260-203ENST00000539559 COPS7AQ9UBW8 275 aa17.93■□□□□ 0.46
TMEM260-203ENST00000539559 TRIOBPQ9H2D6 2365 aa17.92■□□□□ 0.46
TMEM260-203ENST00000539559 DHRS11Q6UWP2 260 aa17.92■□□□□ 0.46
TMEM260-203ENST00000539559 ZNF304Q9HCX3 659 aa17.92■□□□□ 0.46
TMEM260-203ENST00000539559 RAB18Q9NP72 206 aa17.92■□□□□ 0.46
TMEM260-203ENST00000539559 PMS2P1A4D2B8 440 aa17.92■□□□□ 0.46
TMEM260-203ENST00000539559 A6NIZ1 184 aa17.92■□□□□ 0.46
TMEM260-203ENST00000539559 OR8U9P0C7N5 309 aa17.92■□□□□ 0.46
TMEM260-203ENST00000539559 P2RY4P51582 365 aa17.92■□□□□ 0.46
TMEM260-203ENST00000539559 RAP1BP61224 184 aa17.92■□□□□ 0.46
TMEM260-203ENST00000539559 RAP1AP62834 184 aa17.92■□□□□ 0.46
TMEM260-203ENST00000539559 OR8U1Q8NH10 309 aa17.92■□□□□ 0.46
TMEM260-203ENST00000539559 SECTM1Q8WVN6 248 aa17.92■□□□□ 0.46
TMEM260-203ENST00000539559 EHFQ9NZC4 300 aa17.92■□□□□ 0.46
TMEM260-203ENST00000539559 MMACHCQ9Y4U1 282 aa17.92■□□□□ 0.46
TMEM260-203ENST00000539559 FER1L5A0AVI2 2057 aa17.92■□□□□ 0.46
TMEM260-203ENST00000539559 PRSS44E7EML9 344 aa17.91■□□□□ 0.46
TMEM260-203ENST00000539559 RER1O15258 196 aa17.91■□□□□ 0.46
TMEM260-203ENST00000539559 CD27P26842 260 aa17.91■□□□□ 0.46
TMEM260-203ENST00000539559 OR3A2P47893 321 aa17.91■□□□□ 0.46
TMEM260-203ENST00000539559 CSNK2A1P68400 391 aaPredicted RBP17.91■□□□□ 0.46
TMEM260-203ENST00000539559 SPEM2Q0P670 501 aa17.91■□□□□ 0.46
TMEM260-203ENST00000539559 LCN10Q6JVE6 187 aa17.91■□□□□ 0.46
TMEM260-203ENST00000539559 POC1AQ8NBT0 407 aa17.91■□□□□ 0.46
TMEM260-203ENST00000539559 CSNK2A3Q8NEV1 391 aa17.91■□□□□ 0.46
TMEM260-203ENST00000539559 OR8B12Q8NGG6 310 aa17.91■□□□□ 0.46
TMEM260-203ENST00000539559 SMIM8Q96KF7 97 aa17.91■□□□□ 0.46
TMEM260-203ENST00000539559 AQP10Q96PS8 301 aa17.91■□□□□ 0.46
TMEM260-203ENST00000539559 LHFPL6Q9Y693 200 aa17.91■□□□□ 0.46
TMEM260-203ENST00000539559 PQLC2LA1A4F0 135 aa17.91■□□□□ 0.46
TMEM260-203ENST00000539559 E9PLN8 166 aa17.91■□□□□ 0.46
TMEM260-203ENST00000539559 ZNF205O95201 554 aa17.91■□□□□ 0.46
TMEM260-203ENST00000539559 DAOP14920 347 aa17.91■□□□□ 0.46
TMEM260-203ENST00000539559 DAP3P51398 398 aaKnown RBP17.91■□□□□ 0.46
TMEM260-203ENST00000539559 FOXF1Q12946 379 aa17.91■□□□□ 0.46
TMEM260-203ENST00000539559 DEGS2Q6QHC5 323 aa17.91■□□□□ 0.46
TMEM260-203ENST00000539559 OR1N1Q8NGS0 311 aa17.91■□□□□ 0.46
TMEM260-203ENST00000539559 ISOC2Q96AB3 205 aa17.91■□□□□ 0.46
TMEM260-203ENST00000539559 LIN37Q96GY3 246 aaPredicted RBP17.91■□□□□ 0.46
TMEM260-203ENST00000539559 CDC6Q99741 560 aa17.91■□□□□ 0.46
TMEM260-203ENST00000539559 SULT4A1Q9BR01 284 aa17.91■□□□□ 0.46
TMEM260-203ENST00000539559 C20orf24Q9BUV8 137 aa17.91■□□□□ 0.46
TMEM260-203ENST00000539559 VN1R1Q9GZP7 353 aa17.91■□□□□ 0.46
TMEM260-203ENST00000539559 MYF5P13349 255 aa17.9■□□□□ 0.46
TMEM260-203ENST00000539559 TBPP20226 339 aa17.9■□□□□ 0.46
TMEM260-203ENST00000539559 SLC6A9P48067 706 aa17.9■□□□□ 0.46
TMEM260-203ENST00000539559 PPT1P50897 306 aa17.9■□□□□ 0.46
TMEM260-203ENST00000539559 SNU13P55769 128 aaKnown RBP17.9■□□□□ 0.46
TMEM260-203ENST00000539559 ZNF121P58317 390 aaPredicted RBP17.9■□□□□ 0.46
TMEM260-203ENST00000539559 NAA40Q86UY6 237 aa17.9■□□□□ 0.46
TMEM260-203ENST00000539559 OR1L3Q8NH93 324 aa17.9■□□□□ 0.46
TMEM260-203ENST00000539559 DAZLQ92904 295 aaKnown RBP17.9■□□□□ 0.46
TMEM260-203ENST00000539559 C2orf50Q96LR7 162 aa17.9■□□□□ 0.46
TMEM260-203ENST00000539559 NAA11Q9BSU3 229 aaPredicted RBP17.9■□□□□ 0.46
TMEM260-203ENST00000539559 A0A1W2PPE3 182 aa17.9■□□□□ 0.46
TMEM260-203ENST00000539559 MED19A0JLT2 244 aaPredicted RBP17.9■□□□□ 0.46
TMEM260-203ENST00000539559 APOC1P02654 83 aa17.9■□□□□ 0.46
TMEM260-203ENST00000539559 GIMD1P0DJR0 217 aa17.9■□□□□ 0.46
TMEM260-203ENST00000539559 ZNF17P17021 662 aa17.9■□□□□ 0.46
TMEM260-203ENST00000539559 CD38P28907 300 aa17.9■□□□□ 0.46
TMEM260-203ENST00000539559 DCAF7P61962 342 aa17.9■□□□□ 0.46
TMEM260-203ENST00000539559 Q6ZRG5 221 aa17.9■□□□□ 0.46
TMEM260-203ENST00000539559 TMPRSS9Q7Z410 1059 aa17.9■□□□□ 0.46
TMEM260-203ENST00000539559 DMBX1Q8NFW5 382 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms