RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 NAT2P11245 290 aa15.02■□□□□ -0
PCDHB17P-201ENST00000539533 UBE2MP61081 183 aaKnown RBP15.02■□□□□ -0
PCDHB17P-201ENST00000539533 GK2Q14410 553 aaPredicted RBP15.02■□□□□ -0
PCDHB17P-201ENST00000539533 SGCAQ16586 387 aa15.02■□□□□ -0
PCDHB17P-201ENST00000539533 FDX2Q6P4F2 183 aa15.02■□□□□ -0
PCDHB17P-201ENST00000539533 GSG1LQ6UXU4 331 aa15.02■□□□□ -0
PCDHB17P-201ENST00000539533 HSD17B13Q7Z5P4 300 aaPredicted RBP15.02■□□□□ -0
PCDHB17P-201ENST00000539533 C20orf196Q8IYI0 205 aa15.02■□□□□ -0
PCDHB17P-201ENST00000539533 CLRN3Q8NCR9 226 aa15.02■□□□□ -0
PCDHB17P-201ENST00000539533 OR2AK2Q8NG84 335 aa15.02■□□□□ -0
PCDHB17P-201ENST00000539533 OR51A4Q8NGJ6 313 aa15.02■□□□□ -0
PCDHB17P-201ENST00000539533 OR10S1Q8NGN2 331 aa15.02■□□□□ -0
PCDHB17P-201ENST00000539533 RNF133Q8WVZ7 376 aa15.02■□□□□ -0
PCDHB17P-201ENST00000539533 SLAMF6Q96DU3 332 aa15.02■□□□□ -0
PCDHB17P-201ENST00000539533 RBM24Q9BX46 236 aaKnown RBP15.02■□□□□ -0
PCDHB17P-201ENST00000539533 ASH2LQ9UBL3 628 aa15.02■□□□□ -0
PCDHB17P-201ENST00000539533 GDF2Q9UK05 429 aaPredicted RBP15.02■□□□□ -0
PCDHB17P-201ENST00000539533 POLR1DQ9Y2S0 133 aa15.02■□□□□ -0
PCDHB17P-201ENST00000539533 MGAQ8IWI9 3026 aa15.02■□□□□ -0
PCDHB17P-201ENST00000539533 CSF1P09603 554 aa15.02□□□□□ -0.01
PCDHB17P-201ENST00000539533 C10orf128Q5T292 105 aa15.02□□□□□ -0.01
PCDHB17P-201ENST00000539533 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.02□□□□□ -0.01
PCDHB17P-201ENST00000539533 MUC20Q8N307 709 aaPredicted RBP15.02□□□□□ -0.01
PCDHB17P-201ENST00000539533 OR4D10Q8NGI6 311 aa15.02□□□□□ -0.01
PCDHB17P-201ENST00000539533 DMRTA2Q96SC8 542 aa15.02□□□□□ -0.01
PCDHB17P-201ENST00000539533 C1orf198Q9H425 327 aa15.02□□□□□ -0.01
PCDHB17P-201ENST00000539533 TMEM212A6NML5 194 aa15.01□□□□□ -0.01
PCDHB17P-201ENST00000539533 DOK2O60496 412 aa15.01□□□□□ -0.01
PCDHB17P-201ENST00000539533 SRSF10O75494 262 aaKnown RBP15.01□□□□□ -0.01
PCDHB17P-201ENST00000539533 KDM4BO94953 1096 aa15.01□□□□□ -0.01
PCDHB17P-201ENST00000539533 NR2C1P13056 603 aa15.01□□□□□ -0.01
PCDHB17P-201ENST00000539533 ZNF133P52736 654 aaPredicted RBP15.01□□□□□ -0.01
PCDHB17P-201ENST00000539533 SCAND1P57086 179 aa15.01□□□□□ -0.01
PCDHB17P-201ENST00000539533 DCAF12L2Q5VW00 463 aa15.01□□□□□ -0.01
PCDHB17P-201ENST00000539533 AAED1Q7RTV5 226 aa15.01□□□□□ -0.01
PCDHB17P-201ENST00000539533 SCNM1Q9BWG6 230 aa15.01□□□□□ -0.01
PCDHB17P-201ENST00000539533 ULBP2Q9BZM5 246 aa15.01□□□□□ -0.01
PCDHB17P-201ENST00000539533 COMMD4Q9H0A8 199 aa15.01□□□□□ -0.01
PCDHB17P-201ENST00000539533 TAS2R8Q9NYW2 309 aa15.01□□□□□ -0.01
PCDHB17P-201ENST00000539533 STEAP1Q9UHE8 339 aa15.01□□□□□ -0.01
PCDHB17P-201ENST00000539533 EMC9Q9Y3B6 208 aa15.01□□□□□ -0.01
PCDHB17P-201ENST00000539533 TRBV5-7A0A0A0MS05 114 aa15□□□□□ -0.01
PCDHB17P-201ENST00000539533 GGT3PA6NGU5 568 aa15□□□□□ -0.01
PCDHB17P-201ENST00000539533 DHHO43323 396 aa15□□□□□ -0.01
PCDHB17P-201ENST00000539533 CEACAM4O75871 244 aa15□□□□□ -0.01
PCDHB17P-201ENST00000539533 H2BFMP0C1H6 154 aa15□□□□□ -0.01
PCDHB17P-201ENST00000539533 KCNMB1Q16558 191 aa15□□□□□ -0.01
PCDHB17P-201ENST00000539533 HIST2H2ABQ8IUE6 130 aaPredicted RBP15□□□□□ -0.01
PCDHB17P-201ENST00000539533 OR2AJ1Q8NGZ0 328 aa15□□□□□ -0.01
PCDHB17P-201ENST00000539533 OR1S1Q8NH92 325 aa15□□□□□ -0.01
PCDHB17P-201ENST00000539533 EXO5Q9H790 373 aa15□□□□□ -0.01
PCDHB17P-201ENST00000539533 DMXL2Q8TDJ6 3036 aa15□□□□□ -0.01
PCDHB17P-201ENST00000539533 BOD1L1Q8NFC6 3051 aa15□□□□□ -0.01
PCDHB17P-201ENST00000539533 ZNF98A6NK75 572 aa15□□□□□ -0.01
PCDHB17P-201ENST00000539533 RER1O15258 196 aa15□□□□□ -0.01
PCDHB17P-201ENST00000539533 SIGLEC5O15389 551 aa15□□□□□ -0.01
PCDHB17P-201ENST00000539533 FLI1Q01543 452 aaPredicted RBP15□□□□□ -0.01
PCDHB17P-201ENST00000539533 ANKRD16Q6P6B7 361 aa15□□□□□ -0.01
PCDHB17P-201ENST00000539533 CATSPERDQ86XM0 798 aa15□□□□□ -0.01
PCDHB17P-201ENST00000539533 PDZD9Q8IXQ8 264 aa15□□□□□ -0.01
PCDHB17P-201ENST00000539533 TNFAIP8L1Q8WVP5 186 aa15□□□□□ -0.01
PCDHB17P-201ENST00000539533 TMEM106AQ96A25 262 aa15□□□□□ -0.01
PCDHB17P-201ENST00000539533 INTS12Q96CB8 462 aaKnown RBP15□□□□□ -0.01
PCDHB17P-201ENST00000539533 ZDHHC11Q9H8X9 412 aa15□□□□□ -0.01
PCDHB17P-201ENST00000539533 ZMAT5Q9UDW3 170 aaKnown RBP15□□□□□ -0.01
PCDHB17P-201ENST00000539533 R4GMQ9 66 aa15□□□□□ -0.01
PCDHB17P-201ENST00000539533 ZNF254O75437 659 aa14.99□□□□□ -0.01
PCDHB17P-201ENST00000539533 CTAG2O75638 210 aa14.99□□□□□ -0.01
PCDHB17P-201ENST00000539533 EFNB2P52799 333 aa14.99□□□□□ -0.01
PCDHB17P-201ENST00000539533 GMFBP60983 142 aa14.99□□□□□ -0.01
PCDHB17P-201ENST00000539533 GUCA2AQ02747 115 aa14.99□□□□□ -0.01
PCDHB17P-201ENST00000539533 ZNF660Q6AZW8 331 aaPredicted RBP14.99□□□□□ -0.01
PCDHB17P-201ENST00000539533 DEGS2Q6QHC5 323 aa14.99□□□□□ -0.01
PCDHB17P-201ENST00000539533 OR51S1Q8NGJ8 323 aa14.99□□□□□ -0.01
PCDHB17P-201ENST00000539533 FNDC9Q8TBE3 224 aa14.99□□□□□ -0.01
PCDHB17P-201ENST00000539533 NABP1Q96AH0 204 aa14.99□□□□□ -0.01
PCDHB17P-201ENST00000539533 MRPS24Q96EL2 167 aaKnown RBP14.99□□□□□ -0.01
PCDHB17P-201ENST00000539533 SCPEP1Q9HB40 452 aa14.99□□□□□ -0.01
PCDHB17P-201ENST00000539533 TMEM138Q9NPI0 162 aa14.99□□□□□ -0.01
PCDHB17P-201ENST00000539533 TRGV5A0A0B4J1U4 118 aa14.99□□□□□ -0.01
PCDHB17P-201ENST00000539533 TMEM272A0A1B0GTI8 110 aa14.99□□□□□ -0.01
PCDHB17P-201ENST00000539533 TMEM269A0A1B0GVZ9 245 aa14.99□□□□□ -0.01
PCDHB17P-201ENST00000539533 FAM74A7A6NL05 159 aa14.99□□□□□ -0.01
PCDHB17P-201ENST00000539533 WISP2O76076 250 aa14.99□□□□□ -0.01
PCDHB17P-201ENST00000539533 GTF2F2P13984 249 aa14.99□□□□□ -0.01
PCDHB17P-201ENST00000539533 GUCA1AP43080 201 aaPredicted RBP14.99□□□□□ -0.01
PCDHB17P-201ENST00000539533 MPPED2Q15777 294 aa14.99□□□□□ -0.01
PCDHB17P-201ENST00000539533 FAM74A3Q4VXF1 159 aa14.99□□□□□ -0.01
PCDHB17P-201ENST00000539533 CDH26Q8IXH8 852 aa14.99□□□□□ -0.01
PCDHB17P-201ENST00000539533 LRRC18Q8N456 261 aa14.99□□□□□ -0.01
PCDHB17P-201ENST00000539533 OR5M9Q8NGP3 310 aa14.99□□□□□ -0.01
PCDHB17P-201ENST00000539533 NELFAQ9H3P2 528 aa14.99□□□□□ -0.01
PCDHB17P-201ENST00000539533 IFT22Q9H7X7 185 aa14.99□□□□□ -0.01
PCDHB17P-201ENST00000539533 CRLF2Q9HC73 371 aa14.99□□□□□ -0.01
PCDHB17P-201ENST00000539533 G6PC2Q9NQR9 355 aa14.99□□□□□ -0.01
PCDHB17P-201ENST00000539533 SPRR3Q9UBC9 169 aa14.99□□□□□ -0.01
PCDHB17P-201ENST00000539533 KLF2Q9Y5W3 355 aaPredicted RBP14.99□□□□□ -0.01
PCDHB17P-201ENST00000539533 NCOA6Q14686 2063 aaPredicted RBP14.99□□□□□ -0.01
PCDHB17P-201ENST00000539533 TNRC6AQ8NDV7 1962 aaKnown RBP14.99□□□□□ -0.01
PCDHB17P-201ENST00000539533 ACTL6AO96019 429 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms