RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 BAP18Q8IXM2 172 aa13.05□□□□□ -0.32
CACNB1-206ENST00000539338 AKR7LQ8NHP1 331 aa13.05□□□□□ -0.32
CACNB1-206ENST00000539338 INTS12Q96CB8 462 aaKnown RBP13.05□□□□□ -0.32
CACNB1-206ENST00000539338 CCL27Q9Y4X3 112 aa13.05□□□□□ -0.32
CACNB1-206ENST00000539338 ATP23Q9Y6H3 246 aa13.05□□□□□ -0.32
CACNB1-206ENST00000539338 RAB19A4D1S5 217 aa13.05□□□□□ -0.32
CACNB1-206ENST00000539338 ADRA2CP18825 462 aa13.05□□□□□ -0.32
CACNB1-206ENST00000539338 PIGPP57054 158 aa13.05□□□□□ -0.32
CACNB1-206ENST00000539338 PPP1CAP62136 330 aa13.05□□□□□ -0.32
CACNB1-206ENST00000539338 SPANXN5Q5MJ07 72 aa13.05□□□□□ -0.32
CACNB1-206ENST00000539338 GLDNQ6ZMI3 551 aaPredicted RBP13.05□□□□□ -0.32
CACNB1-206ENST00000539338 ZFP62Q8NB50 900 aaPredicted RBP13.05□□□□□ -0.32
CACNB1-206ENST00000539338 ST8SIA2Q92186 375 aa13.05□□□□□ -0.32
CACNB1-206ENST00000539338 ALKBH3Q96Q83 286 aaPredicted RBP13.05□□□□□ -0.32
CACNB1-206ENST00000539338 GABRG3Q99928 467 aa13.05□□□□□ -0.32
CACNB1-206ENST00000539338 MAGT1Q9H0U3 335 aa13.05□□□□□ -0.32
CACNB1-206ENST00000539338 FOXJ3Q9UPW0 622 aa13.05□□□□□ -0.32
CACNB1-206ENST00000539338 EXOGQ9Y2C4 368 aaKnown RBP13.05□□□□□ -0.32
CACNB1-206ENST00000539338 XRCC2O43543 280 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 ANGPTL7O43827 346 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 CT62P0C5K7 136 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 FAM157BP0CG42 384 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 HOXC8P31273 242 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 MVDP53602 400 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 TMEM123Q8N131 208 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 LFNGQ8NES3 379 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 OPA3Q9H6K4 179 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 ST3GAL6Q9Y274 331 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 XIRP1Q702N8 1843 aaKnown RBP13.04□□□□□ -0.32
CACNB1-206ENST00000539338 RGS11O94810 467 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 ZIC2O95409 532 aaPredicted RBP13.04□□□□□ -0.32
CACNB1-206ENST00000539338 CTXN2P0C2S0 81 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 HAAOP46952 286 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 AGFG1P52594 562 aaKnown RBP13.04□□□□□ -0.32
CACNB1-206ENST00000539338 DEFA6Q01524 100 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 CLN3Q13286 438 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 ELFN2Q5R3F8 820 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 ZBTB37Q5TC79 503 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 LCN15Q6UWW0 184 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 SSX9Q7RTT3 188 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 NOXO1Q8NFA2 376 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 TNS1Q9HBL0 1735 aaKnown RBP13.04□□□□□ -0.32
CACNB1-206ENST00000539338 IGHV5-51A0A0C4DH38 117 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 ZNF816-ZNF321PA0A0X1KG74 233 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 LRP5LA4QPB2 252 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 UMAD1C9J7I0 102 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 GLAP06280 429 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 KLRB1Q12918 225 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 KIAA0141Q14154 515 aaPredicted RBP13.04□□□□□ -0.32
CACNB1-206ENST00000539338 ZNF321PQ8N8H1 164 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 RND1Q92730 232 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 HLA-HP01893 362 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 TBPP20226 339 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 AANATQ16613 207 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 ZNF766Q5HY98 468 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 SCCPDHQ8NBX0 429 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 NANPQ8TBE9 248 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 C2orf50Q96LR7 162 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 GNG13Q9P2W3 67 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 RP1L1Q8IWN7 2480 aaPredicted RBP13.04□□□□□ -0.32
CACNB1-206ENST00000539338 KIAA1217Q5T5P2 1943 aa13.04□□□□□ -0.32
CACNB1-206ENST00000539338 TOX3O15405 576 aaPredicted RBP13.03□□□□□ -0.32
CACNB1-206ENST00000539338 CELA2BP08218 269 aaPredicted RBP13.03□□□□□ -0.32
CACNB1-206ENST00000539338 WFDC8Q8IUA0 241 aa13.03□□□□□ -0.32
CACNB1-206ENST00000539338 TMEM229BQ8NBD8 167 aa13.03□□□□□ -0.32
CACNB1-206ENST00000539338 OR4D11Q8NGI4 311 aa13.03□□□□□ -0.32
CACNB1-206ENST00000539338 SPACA9Q96E40 222 aaPredicted RBP13.03□□□□□ -0.32
CACNB1-206ENST00000539338 TMEM41BQ5BJD5 291 aa13.03□□□□□ -0.32
CACNB1-206ENST00000539338 CATSPERDQ86XM0 798 aa13.03□□□□□ -0.32
CACNB1-206ENST00000539338 TRIB1Q96RU8 372 aa13.03□□□□□ -0.32
CACNB1-206ENST00000539338 ARFGEF1Q9Y6D6 1849 aa13.03□□□□□ -0.32
CACNB1-206ENST00000539338 FFAR1O14842 300 aa13.03□□□□□ -0.32
CACNB1-206ENST00000539338 MGST1P10620 155 aaKnown RBP13.03□□□□□ -0.32
CACNB1-206ENST00000539338 PRAMEF5Q5TYX0 476 aa13.03□□□□□ -0.32
CACNB1-206ENST00000539338 PRAMEF6Q5VXH4 476 aa13.03□□□□□ -0.32
CACNB1-206ENST00000539338 TMEM88Q6PEY1 159 aa13.03□□□□□ -0.32
CACNB1-206ENST00000539338 CD300LDQ6UXZ3 194 aa13.03□□□□□ -0.32
CACNB1-206ENST00000539338 RTN4IP1Q8WWV3 396 aaPredicted RBP13.03□□□□□ -0.32
CACNB1-206ENST00000539338 TTC9Q92623 222 aa13.03□□□□□ -0.32
CACNB1-206ENST00000539338 HDGFL3Q9Y3E1 203 aa13.03□□□□□ -0.32
CACNB1-206ENST00000539338 PPP1R2P9O14990 202 aa13.03□□□□□ -0.32
CACNB1-206ENST00000539338 CDKN2AP42771 156 aaKnown RBP13.03□□□□□ -0.32
CACNB1-206ENST00000539338 SLC25A1P53007 311 aa13.03□□□□□ -0.32
CACNB1-206ENST00000539338 PDZD11Q5EBL8 140 aa13.03□□□□□ -0.32
CACNB1-206ENST00000539338 GALNT16Q8N428 558 aa13.03□□□□□ -0.32
CACNB1-206ENST00000539338 COX14Q96I36 57 aa13.03□□□□□ -0.32
CACNB1-206ENST00000539338 VN1R1Q9GZP7 353 aa13.03□□□□□ -0.32
CACNB1-206ENST00000539338 OSGIN2Q9Y236 505 aa13.03□□□□□ -0.32
CACNB1-206ENST00000539338 IAPPP10997 89 aa13.03□□□□□ -0.32
CACNB1-206ENST00000539338 INSM1Q01101 510 aaPredicted RBP13.03□□□□□ -0.32
CACNB1-206ENST00000539338 OR2AE1Q8NHA4 323 aa13.03□□□□□ -0.32
CACNB1-206ENST00000539338 CMBLQ96DG6 245 aa13.03□□□□□ -0.32
CACNB1-206ENST00000539338 TRBV5-3A0A0A0MS03 114 aa13.02□□□□□ -0.32
CACNB1-206ENST00000539338 HAX1O00165 279 aa13.02□□□□□ -0.32
CACNB1-206ENST00000539338 OR2C1O95371 312 aa13.02□□□□□ -0.32
CACNB1-206ENST00000539338 TXNDC12O95881 172 aa13.02□□□□□ -0.32
CACNB1-206ENST00000539338 GABRA1P14867 456 aa13.02□□□□□ -0.32
CACNB1-206ENST00000539338 ACKR3P25106 362 aa13.02□□□□□ -0.32
CACNB1-206ENST00000539338 GPX8Q8TED1 209 aa13.02□□□□□ -0.32
CACNB1-206ENST00000539338 TSPAN32Q96QS1 320 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms