RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 H7C417 338 aa12.28□□□□□ -0.44
ACTN1-205ENST00000538545 SPRY1O43609 319 aaPredicted RBP12.28□□□□□ -0.44
ACTN1-205ENST00000538545 NGFP01138 241 aa12.28□□□□□ -0.44
ACTN1-205ENST00000538545 GABRA1P14867 456 aa12.28□□□□□ -0.44
ACTN1-205ENST00000538545 ANXA7P20073 488 aaKnown RBP12.28□□□□□ -0.44
ACTN1-205ENST00000538545 C3P1Q6ZMU1 363 aa12.28□□□□□ -0.44
ACTN1-205ENST00000538545 Q6ZTK2 550 aa12.28□□□□□ -0.44
ACTN1-205ENST00000538545 GIMAP1Q8WWP7 306 aa12.28□□□□□ -0.44
ACTN1-205ENST00000538545 FAM117AQ9C073 453 aa12.28□□□□□ -0.44
ACTN1-205ENST00000538545 C20orf85Q9H1P6 137 aa12.28□□□□□ -0.44
ACTN1-205ENST00000538545 MTFP1Q9UDX5 166 aa12.28□□□□□ -0.44
ACTN1-205ENST00000538545 ATRXP46100 2492 aa12.28□□□□□ -0.44
ACTN1-205ENST00000538545 ARID1AO14497 2285 aa12.28□□□□□ -0.44
ACTN1-205ENST00000538545 TTLL8A6PVC2 850 aa12.28□□□□□ -0.44
ACTN1-205ENST00000538545 CRTAPO75718 401 aaPredicted RBP12.28□□□□□ -0.44
ACTN1-205ENST00000538545 FARS2O95363 451 aaKnown RBP12.28□□□□□ -0.44
ACTN1-205ENST00000538545 ACTL6AO96019 429 aa12.28□□□□□ -0.44
ACTN1-205ENST00000538545 SERPINA2P20848 420 aa12.28□□□□□ -0.44
ACTN1-205ENST00000538545 FCN2Q15485 313 aa12.28□□□□□ -0.44
ACTN1-205ENST00000538545 SEC22CQ9BRL7 303 aa12.28□□□□□ -0.44
ACTN1-205ENST00000538545 C1QTNF6Q9BXI9 259 aa12.28□□□□□ -0.44
ACTN1-205ENST00000538545 OR10A2Q9H208 303 aa12.28□□□□□ -0.44
ACTN1-205ENST00000538545 ING4Q9UNL4 249 aa12.28□□□□□ -0.44
ACTN1-205ENST00000538545 NCOR2Q9Y618 2525 aa12.27□□□□□ -0.44
ACTN1-205ENST00000538545 IGKV1-27A0A075B6S5 117 aa12.27□□□□□ -0.44
ACTN1-205ENST00000538545 A0A0U1RQV5 110 aa12.27□□□□□ -0.44
ACTN1-205ENST00000538545 IL18BPO95998 194 aa12.27□□□□□ -0.44
ACTN1-205ENST00000538545 CXCL3P19876 107 aa12.27□□□□□ -0.44
ACTN1-205ENST00000538545 RTP5Q14D33 572 aa12.27□□□□□ -0.44
ACTN1-205ENST00000538545 DRAM2Q6UX65 266 aa12.27□□□□□ -0.44
ACTN1-205ENST00000538545 MYPOPQ86VE0 399 aaPredicted RBP12.27□□□□□ -0.44
ACTN1-205ENST00000538545 BHLHE23Q8NDY6 225 aa12.27□□□□□ -0.44
ACTN1-205ENST00000538545 RADILQ96JH8 1075 aa12.27□□□□□ -0.44
ACTN1-205ENST00000538545 TINAGL1Q9GZM7 467 aaPredicted RBP12.27□□□□□ -0.44
ACTN1-205ENST00000538545 PLSCR3Q9NRY6 295 aa12.27□□□□□ -0.44
ACTN1-205ENST00000538545 PARPBPQ9NWS1 579 aa12.27□□□□□ -0.44
ACTN1-205ENST00000538545 V9GYS6 101 aa12.27□□□□□ -0.44
ACTN1-205ENST00000538545 HEATR1Q9H583 2144 aaKnown RBP12.27□□□□□ -0.45
ACTN1-205ENST00000538545 ZNF891A8MT65 544 aaPredicted RBP12.27□□□□□ -0.45
ACTN1-205ENST00000538545 H2AFB2P0C5Z0 115 aa12.27□□□□□ -0.45
ACTN1-205ENST00000538545 UBE2MP61081 183 aaKnown RBP12.27□□□□□ -0.45
ACTN1-205ENST00000538545 RAB1AP62820 205 aa12.27□□□□□ -0.45
ACTN1-205ENST00000538545 PDCD1Q15116 288 aa12.27□□□□□ -0.45
ACTN1-205ENST00000538545 ST3GAL2Q16842 350 aa12.27□□□□□ -0.45
ACTN1-205ENST00000538545 NKPD1Q17RQ9 610 aa12.27□□□□□ -0.45
ACTN1-205ENST00000538545 P4HA3Q7Z4N8 544 aa12.27□□□□□ -0.45
ACTN1-205ENST00000538545 ZNF584Q8IVC4 421 aa12.27□□□□□ -0.45
ACTN1-205ENST00000538545 CNEP1R1Q8N9A8 125 aa12.27□□□□□ -0.45
ACTN1-205ENST00000538545 OR51S1Q8NGJ8 323 aa12.27□□□□□ -0.45
ACTN1-205ENST00000538545 OR52B4Q8NGK2 314 aa12.27□□□□□ -0.45
ACTN1-205ENST00000538545 LPAR5Q9H1C0 372 aa12.27□□□□□ -0.45
ACTN1-205ENST00000538545 NEK6Q9HC98 313 aa12.27□□□□□ -0.45
ACTN1-205ENST00000538545 LYZL6O75951 148 aa12.26□□□□□ -0.45
ACTN1-205ENST00000538545 DYRK1AQ13627 763 aa12.26□□□□□ -0.45
ACTN1-205ENST00000538545 CDNFQ49AH0 187 aa12.26□□□□□ -0.45
ACTN1-205ENST00000538545 PLAC9Q5JTB6 97 aa12.26□□□□□ -0.45
ACTN1-205ENST00000538545 SEMA6DQ8NFY4 1073 aa12.26□□□□□ -0.45
ACTN1-205ENST00000538545 TNFAIP8L1Q8WVP5 186 aa12.26□□□□□ -0.45
ACTN1-205ENST00000538545 KALRNO60229 2985 aa12.26□□□□□ -0.45
ACTN1-205ENST00000538545 RAD52P43351 418 aa12.26□□□□□ -0.45
ACTN1-205ENST00000538545 RRAS2P62070 204 aaPredicted RBP12.26□□□□□ -0.45
ACTN1-205ENST00000538545 FOXF2Q12947 444 aa12.26□□□□□ -0.45
ACTN1-205ENST00000538545 BCL2A1Q16548 175 aa12.26□□□□□ -0.45
ACTN1-205ENST00000538545 GSG1Q2KHT4 349 aa12.26□□□□□ -0.45
ACTN1-205ENST00000538545 IGFL2Q6UWQ7 119 aa12.26□□□□□ -0.45
ACTN1-205ENST00000538545 PGAP1Q75T13 922 aa12.26□□□□□ -0.45
ACTN1-205ENST00000538545 CD163Q86VB7 1156 aa12.26□□□□□ -0.45
ACTN1-205ENST00000538545 GPX8Q8TED1 209 aa12.26□□□□□ -0.45
ACTN1-205ENST00000538545 MAFIPQ8WZ33 124 aa12.26□□□□□ -0.45
ACTN1-205ENST00000538545 FOXRED1Q96CU9 486 aaPredicted RBP12.26□□□□□ -0.45
ACTN1-205ENST00000538545 ITPKCQ96DU7 683 aa12.26□□□□□ -0.45
ACTN1-205ENST00000538545 CHST5Q9GZS9 411 aa12.26□□□□□ -0.45
ACTN1-205ENST00000538545 POFUT1Q9H488 388 aa12.26□□□□□ -0.45
ACTN1-205ENST00000538545 KCNK7Q9Y2U2 307 aa12.26□□□□□ -0.45
ACTN1-205ENST00000538545 ROS1P08922 2347 aa12.25□□□□□ -0.45
ACTN1-205ENST00000538545 TRAV17A0A0B4J275 112 aa12.25□□□□□ -0.45
ACTN1-205ENST00000538545 TMEM14DPA8MWL7 114 aa12.25□□□□□ -0.45
ACTN1-205ENST00000538545 CDC14BO60729 498 aa12.25□□□□□ -0.45
ACTN1-205ENST00000538545 RAD51DO75771 328 aa12.25□□□□□ -0.45
ACTN1-205ENST00000538545 CELA3BP08861 270 aa12.25□□□□□ -0.45
ACTN1-205ENST00000538545 CPN1P15169 458 aa12.25□□□□□ -0.45
ACTN1-205ENST00000538545 PSMB1P20618 241 aaKnown RBP12.25□□□□□ -0.45
ACTN1-205ENST00000538545 TMEM50BP56557 158 aa12.25□□□□□ -0.45
ACTN1-205ENST00000538545 SCAND1P57086 179 aa12.25□□□□□ -0.45
ACTN1-205ENST00000538545 FAM3AP98173 230 aa12.25□□□□□ -0.45
ACTN1-205ENST00000538545 ZNF260Q3ZCT1 412 aa12.25□□□□□ -0.45
ACTN1-205ENST00000538545 VWA1Q6PCB0 445 aa12.25□□□□□ -0.45
ACTN1-205ENST00000538545 ZNF782Q6ZMW2 699 aaPredicted RBP12.25□□□□□ -0.45
ACTN1-205ENST00000538545 FJX1Q86VR8 437 aa12.25□□□□□ -0.45
ACTN1-205ENST00000538545 RPRMLQ8N4K4 120 aa12.25□□□□□ -0.45
ACTN1-205ENST00000538545 OR11H7Q8NGC8 314 aa12.25□□□□□ -0.45
ACTN1-205ENST00000538545 SSC4DQ8WTU2 575 aa12.25□□□□□ -0.45
ACTN1-205ENST00000538545 PIGCQ92535 297 aa12.25□□□□□ -0.45
ACTN1-205ENST00000538545 UQCC2Q9BRT2 126 aa12.25□□□□□ -0.45
ACTN1-205ENST00000538545 SCNM1Q9BWG6 230 aa12.25□□□□□ -0.45
ACTN1-205ENST00000538545 GHITMQ9H3K2 345 aa12.25□□□□□ -0.45
ACTN1-205ENST00000538545 RAB22AQ9UL26 194 aa12.25□□□□□ -0.45
ACTN1-205ENST00000538545 NUBP2Q9Y5Y2 271 aa12.25□□□□□ -0.45
ACTN1-205ENST00000538545 ZNF724A8MTY0 619 aa12.25□□□□□ -0.45
ACTN1-205ENST00000538545 EIF2S3P41091 472 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms