RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 WDR82Q6UXN9 313 aa11.43□□□□□ -0.58
SMARCA4-206ENST00000538456 SLC15A3Q8IY34 581 aa11.43□□□□□ -0.58
SMARCA4-206ENST00000538456 BEND2Q8NDZ0 799 aa11.43□□□□□ -0.58
SMARCA4-206ENST00000538456 OR51G2Q8NGK0 314 aa11.43□□□□□ -0.58
SMARCA4-206ENST00000538456 RNPEPL1Q9HAU8 725 aa11.43□□□□□ -0.58
SMARCA4-206ENST00000538456 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.43□□□□□ -0.58
SMARCA4-206ENST00000538456 SNTG1Q9NSN8 517 aa11.43□□□□□ -0.58
SMARCA4-206ENST00000538456 NDUFAF4Q9P032 175 aa11.43□□□□□ -0.58
SMARCA4-206ENST00000538456 MAB21L2Q9Y586 359 aa11.43□□□□□ -0.58
SMARCA4-206ENST00000538456 COL7A1Q02388 2944 aa11.42□□□□□ -0.58
SMARCA4-206ENST00000538456 A0A1W2PQ09 198 aa11.42□□□□□ -0.58
SMARCA4-206ENST00000538456 NME4O00746 187 aa11.42□□□□□ -0.58
SMARCA4-206ENST00000538456 ARPC3O15145 178 aa11.42□□□□□ -0.58
SMARCA4-206ENST00000538456 TBX1O43435 398 aa11.42□□□□□ -0.58
SMARCA4-206ENST00000538456 XPNPEP2O43895 674 aa11.42□□□□□ -0.58
SMARCA4-206ENST00000538456 AMY2BP19961 511 aa11.42□□□□□ -0.58
SMARCA4-206ENST00000538456 OTX1P32242 354 aaPredicted RBP11.42□□□□□ -0.58
SMARCA4-206ENST00000538456 KIR2DS4P43632 304 aa11.42□□□□□ -0.58
SMARCA4-206ENST00000538456 SLC7A2P52569 658 aa11.42□□□□□ -0.58
SMARCA4-206ENST00000538456 ACSM1Q08AH1 577 aa11.42□□□□□ -0.58
SMARCA4-206ENST00000538456 TAF13Q15543 124 aa11.42□□□□□ -0.58
SMARCA4-206ENST00000538456 ZBTB37Q5TC79 503 aa11.42□□□□□ -0.58
SMARCA4-206ENST00000538456 NCR3LG1Q68D85 454 aa11.42□□□□□ -0.58
SMARCA4-206ENST00000538456 STUMQ69YW2 141 aa11.42□□□□□ -0.58
SMARCA4-206ENST00000538456 DCXRQ7Z4W1 244 aa11.42□□□□□ -0.58
SMARCA4-206ENST00000538456 ARPINQ7Z6K5 226 aa11.42□□□□□ -0.58
SMARCA4-206ENST00000538456 PROKR2Q8NFJ6 384 aa11.42□□□□□ -0.58
SMARCA4-206ENST00000538456 OR1M1Q8NGA1 313 aa11.42□□□□□ -0.58
SMARCA4-206ENST00000538456 OR4S1Q8NGB4 309 aa11.42□□□□□ -0.58
SMARCA4-206ENST00000538456 PHF21AQ96BD5 680 aa11.42□□□□□ -0.58
SMARCA4-206ENST00000538456 ELAC2Q9BQ52 826 aaKnown RBP11.42□□□□□ -0.58
SMARCA4-206ENST00000538456 OPA3Q9H6K4 179 aa11.42□□□□□ -0.58
SMARCA4-206ENST00000538456 PPP1R3EQ9H7J1 279 aa11.42□□□□□ -0.58
SMARCA4-206ENST00000538456 MRGBPQ9NV56 204 aa11.42□□□□□ -0.58
SMARCA4-206ENST00000538456 KCNG2Q9UJ96 466 aa11.42□□□□□ -0.58
SMARCA4-206ENST00000538456 ZNF391Q9UJN7 358 aa11.42□□□□□ -0.58
SMARCA4-206ENST00000538456 NKX6-3A6NJ46 265 aa11.41□□□□□ -0.58
SMARCA4-206ENST00000538456 CDIPTO14735 213 aa11.41□□□□□ -0.58
SMARCA4-206ENST00000538456 ANGPTL7O43827 346 aa11.41□□□□□ -0.58
SMARCA4-206ENST00000538456 SPARCP09486 303 aa11.41□□□□□ -0.58
SMARCA4-206ENST00000538456 RHCEP18577 417 aa11.41□□□□□ -0.58
SMARCA4-206ENST00000538456 NAA10P41227 235 aaPredicted RBP11.41□□□□□ -0.58
SMARCA4-206ENST00000538456 TGM4P49221 684 aa11.41□□□□□ -0.58
SMARCA4-206ENST00000538456 GSK3BP49841 420 aa11.41□□□□□ -0.58
SMARCA4-206ENST00000538456 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.41□□□□□ -0.58
SMARCA4-206ENST00000538456 LRRC75BQ2VPJ9 315 aa11.41□□□□□ -0.58
SMARCA4-206ENST00000538456 VAX1Q5SQQ9 334 aa11.41□□□□□ -0.58
SMARCA4-206ENST00000538456 PGBD2Q6P3X8 592 aa11.41□□□□□ -0.58
SMARCA4-206ENST00000538456 SLC16A9Q7RTY1 509 aa11.41□□□□□ -0.58
SMARCA4-206ENST00000538456 CYB561A3Q8NBI2 242 aa11.41□□□□□ -0.58
SMARCA4-206ENST00000538456 CCDC197Q8NCU1 140 aa11.41□□□□□ -0.58
SMARCA4-206ENST00000538456 OR51L1Q8NGJ5 315 aa11.41□□□□□ -0.58
SMARCA4-206ENST00000538456 OR4C15Q8NGM1 316 aa11.41□□□□□ -0.58
SMARCA4-206ENST00000538456 OR9Q1Q8NGQ5 310 aa11.41□□□□□ -0.58
SMARCA4-206ENST00000538456 C8orf46Q8TAG6 207 aa11.41□□□□□ -0.58
SMARCA4-206ENST00000538456 C12orf43Q96C57 262 aaKnown RBP11.41□□□□□ -0.58
SMARCA4-206ENST00000538456 R3HDM4Q96D70 268 aa11.41□□□□□ -0.58
SMARCA4-206ENST00000538456 DMRTB1Q96MA1 342 aa11.41□□□□□ -0.58
SMARCA4-206ENST00000538456 NKX3-1Q99801 234 aaPredicted RBP11.41□□□□□ -0.58
SMARCA4-206ENST00000538456 FAM234AQ9H0X4 552 aa11.41□□□□□ -0.58
SMARCA4-206ENST00000538456 WDR13Q9H1Z4 485 aa11.41□□□□□ -0.58
SMARCA4-206ENST00000538456 MMP28Q9H239 520 aa11.41□□□□□ -0.58
SMARCA4-206ENST00000538456 METTL8Q9H825 291 aaKnown RBP11.41□□□□□ -0.58
SMARCA4-206ENST00000538456 ELL3Q9HB65 397 aaPredicted RBP11.41□□□□□ -0.58
SMARCA4-206ENST00000538456 CENPMQ9NSP4 180 aa11.41□□□□□ -0.58
SMARCA4-206ENST00000538456 HAO2Q9NYQ3 351 aa11.41□□□□□ -0.58
SMARCA4-206ENST00000538456 SLC25A10Q9UBX3 287 aaPredicted RBP11.41□□□□□ -0.58
SMARCA4-206ENST00000538456 AP3M1Q9Y2T2 418 aa11.41□□□□□ -0.58
SMARCA4-206ENST00000538456 CAPN7Q9Y6W3 813 aa11.41□□□□□ -0.58
SMARCA4-206ENST00000538456 M0R1W7 72 aa11.4□□□□□ -0.58
SMARCA4-206ENST00000538456 XRCC2O43543 280 aa11.4□□□□□ -0.58
SMARCA4-206ENST00000538456 CHST1O43916 411 aa11.4□□□□□ -0.58
SMARCA4-206ENST00000538456 FBXO24O75426 580 aa11.4□□□□□ -0.58
SMARCA4-206ENST00000538456 CD28P10747 220 aa11.4□□□□□ -0.58
SMARCA4-206ENST00000538456 NDUFB7P17568 137 aa11.4□□□□□ -0.58
SMARCA4-206ENST00000538456 POU1F1P28069 291 aa11.4□□□□□ -0.58
SMARCA4-206ENST00000538456 HABP2Q14520 560 aaPredicted RBP11.4□□□□□ -0.58
SMARCA4-206ENST00000538456 KRT72Q14CN4 511 aa11.4□□□□□ -0.58
SMARCA4-206ENST00000538456 DGUOKQ16854 277 aa11.4□□□□□ -0.58
SMARCA4-206ENST00000538456 TIGD6Q17RP2 521 aa11.4□□□□□ -0.58
SMARCA4-206ENST00000538456 GFOD2Q3B7J2 385 aa11.4□□□□□ -0.58
SMARCA4-206ENST00000538456 ZDHHC21Q8IVQ6 265 aa11.4□□□□□ -0.58
SMARCA4-206ENST00000538456 FAM86B1Q8N7N1 296 aa11.4□□□□□ -0.58
SMARCA4-206ENST00000538456 ZNRF4Q8WWF5 429 aa11.4□□□□□ -0.58
SMARCA4-206ENST00000538456 SLAMF6Q96DU3 332 aa11.4□□□□□ -0.58
SMARCA4-206ENST00000538456 DUS3LQ96G46 650 aaKnown RBP11.4□□□□□ -0.58
SMARCA4-206ENST00000538456 GAFA1Q96PS6 74 aa11.4□□□□□ -0.58
SMARCA4-206ENST00000538456 FUZQ9BT04 418 aa11.4□□□□□ -0.58
SMARCA4-206ENST00000538456 PAPOLGQ9BWT3 736 aaKnown RBP11.4□□□□□ -0.58
SMARCA4-206ENST00000538456 NPFFR1Q9GZQ6 430 aa11.4□□□□□ -0.58
SMARCA4-206ENST00000538456 RANBP3Q9H6Z4 567 aaPredicted RBP11.4□□□□□ -0.58
SMARCA4-206ENST00000538456 RAB18Q9NP72 206 aa11.4□□□□□ -0.58
SMARCA4-206ENST00000538456 COMMD3-BMI1R4GMX3 469 aa11.4□□□□□ -0.58
SMARCA4-206ENST00000538456 V9GYQ6 96 aa11.4□□□□□ -0.58
SMARCA4-206ENST00000538456 H0YAE9 185 aa11.39□□□□□ -0.59
SMARCA4-206ENST00000538456 TIPRLO75663 272 aa11.39□□□□□ -0.59
SMARCA4-206ENST00000538456 MPIG6BO95866 241 aa11.39□□□□□ -0.59
SMARCA4-206ENST00000538456 ANXA2P07355 339 aaKnown RBP11.39□□□□□ -0.59
SMARCA4-206ENST00000538456 VSIG8P0DPA2 414 aa11.39□□□□□ -0.59
SMARCA4-206ENST00000538456 GNALP38405 381 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms