RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 MFNGO00587 321 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 GOSR2O14653 212 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 RRP8O43159 456 aaKnown RBP8.12□□□□□ -1.11
DDB1-211ENST00000538280 DHHO43323 396 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 CBR3O75828 277 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 TOXO94900 526 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 SIX6O95475 246 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 HPP00738 406 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 ABOP16442 354 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 NFYAP23511 347 aaPredicted RBP8.12□□□□□ -1.11
DDB1-211ENST00000538280 SRD5A2P31213 254 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 CASRP41180 1078 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 MRPS34P82930 218 aaKnown RBP8.12□□□□□ -1.11
DDB1-211ENST00000538280 HLXQ14774 488 aaPredicted RBP8.12□□□□□ -1.11
DDB1-211ENST00000538280 TAF13Q15543 124 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 FAM189A2Q15884 450 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 PNLIPRP3Q17RR3 467 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 RSPO1Q2MKA7 263 aaPredicted RBP8.12□□□□□ -1.11
DDB1-211ENST00000538280 NHLRC3Q5JS37 347 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 LPCAT3Q6P1A2 487 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 FAHD2BQ6P2I3 314 aaPredicted RBP8.12□□□□□ -1.11
DDB1-211ENST00000538280 ABHD12BQ7Z5M8 362 aaPredicted RBP8.12□□□□□ -1.11
DDB1-211ENST00000538280 TRAPPC6BQ86SZ2 158 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 SLC25A42Q86VD7 318 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 ANGPTL5Q86XS5 388 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 C20orf196Q8IYI0 205 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 FAM89BQ8N5H3 189 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 ZNF283Q8N7M2 679 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 GJC3Q8NFK1 279 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 OR5M8Q8NGP6 311 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 C10orf35Q96D05 121 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 CMBLQ96DG6 245 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 FAHD2AQ96GK7 314 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 SGCZQ96LD1 299 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 ZNF385AQ96PM9 386 aaKnown RBP8.12□□□□□ -1.11
DDB1-211ENST00000538280 PIGQQ9BRB3 760 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 ZNF160Q9HCG1 818 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 MED9Q9NWA0 146 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 HPF1Q9NWY4 346 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 SLC39A1Q9NY26 324 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 ZNF224Q9NZL3 707 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 MYEF2Q9P2K5 600 aaKnown RBP8.12□□□□□ -1.11
DDB1-211ENST00000538280 GHRLQ9UBU3 117 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 KIF25Q9UIL4 384 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 VSIG4Q9Y279 399 aa8.12□□□□□ -1.11
DDB1-211ENST00000538280 MRPS28Q9Y2Q9 187 aaKnown RBP8.12□□□□□ -1.11
DDB1-211ENST00000538280 MRPS18CQ9Y3D5 142 aaKnown RBP8.12□□□□□ -1.11
DDB1-211ENST00000538280 C5orf63A6NC05 138 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 GJE1A6NN92 205 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 ZNF716A6NP11 495 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 NPIPA2E9PIF3 369 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 NPIPA3F8WFD2 350 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 SMAD9O15198 467 aaKnown RBP8.11□□□□□ -1.11
DDB1-211ENST00000538280 SHOXO15266 292 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 CDC14BO60729 498 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 MT-CO3P00414 261 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 SLC2A1P11166 492 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 NAT2P11245 290 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 RPA2P15927 270 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 PPP3CBP16298 524 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 HIST1H1DP16402 221 aaKnown RBP8.11□□□□□ -1.11
DDB1-211ENST00000538280 S100A11P31949 105 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 CD96P40200 585 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 OR3A4PP47883 348 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 AP2S1P53680 142 aaPredicted RBP8.11□□□□□ -1.11
DDB1-211ENST00000538280 UBE2MP61081 183 aaKnown RBP8.11□□□□□ -1.11
DDB1-211ENST00000538280 Q0VFX4 171 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 GK2Q14410 553 aaPredicted RBP8.11□□□□□ -1.11
DDB1-211ENST00000538280 KRTAP27-1Q3LI81 207 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 ACTBL2Q562R1 376 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 RNASE10Q5GAN6 216 aaKnown RBP8.11□□□□□ -1.11
DDB1-211ENST00000538280 VAX1Q5SQQ9 334 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 ZNF468Q5VIY5 522 aaPredicted RBP8.11□□□□□ -1.11
DDB1-211ENST00000538280 FAM27BQ5VT28 67 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 RAET1LQ5VY80 246 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 AWAT2Q6E213 333 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 ABLIM2Q6H8Q1 611 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 TMEM65Q6PI78 240 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 GLIPR1L1Q6UWM5 242 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 C3P1Q6ZMU1 363 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 FAM57BQ71RH2 274 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 NAA40Q86UY6 237 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 OR8H3Q8N146 312 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 KCNG3Q8TAE7 436 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 NUDCD2Q8WVJ2 157 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 TNFAIP8L1Q8WVP5 186 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 KCNE4Q8WWG9 221 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 PGAM5Q96HS1 289 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 ADGRG7Q96K78 797 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 FAM71F1Q96KD3 344 aaPredicted RBP8.11□□□□□ -1.11
DDB1-211ENST00000538280 SFXN2Q96NB2 322 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 GNRHR2Q96P88 292 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 GAL3ST1Q99999 423 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 NICN1Q9BSH3 213 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 SRXN1Q9BYN0 137 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 GSX2Q9BZM3 304 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 SPRY4Q9C004 299 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 B3GNT4Q9C0J1 378 aa8.11□□□□□ -1.11
DDB1-211ENST00000538280 ZMAT3Q9HA38 289 aaKnown RBP8.11□□□□□ -1.11
DDB1-211ENST00000538280 ASCL3Q9NQ33 180 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms