RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 TP53RKQ96S44 253 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 SERINC2Q96SA4 455 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 NKX3-1Q99801 234 aaPredicted RBP9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 ARHGDIGQ99819 225 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 MENTQ9BUN1 341 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 OR1A2Q9Y585 309 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 IGHV1OR15-9A0A0B4J2B8 117 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 SOX8P57073 446 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 LMLNQ96KR4 655 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 RAB11FIP5Q9BXF6 653 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 OR2J1Q9GZK6 312 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 WWTR1Q9GZV5 400 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 SLC7A7Q9UM01 511 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 RAMP1O60894 148 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 IRF2P14316 349 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 SERPINA2P20848 420 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 RPL12P30050 165 aaKnown RBP9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 SLC6A6P31641 620 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 BRS3P32247 399 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 DIO1P49895 249 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 FXYD6P3P58550 94 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 PMS2P11Q13670 270 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 ZNF563Q8TA94 476 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 C2orf50Q96LR7 162 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 SMIM3Q9BZL3 60 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 OR5AC2Q9NZP5 309 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 TAC3Q9UHF0 121 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 A0A1B0GV50 99 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 CLDN34H7C241 214 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 K7EQS6 105 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 BHLHE40O14503 412 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 OR4A8P0C604 315 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 PNLIPP16233 465 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 PTNP21246 168 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 CHRNB4P30926 498 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 FCGR2CP31995 323 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 SELENOTP62341 195 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 NHLH1Q02575 133 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 HIKESHIQ53FT3 197 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 ZNF676Q8N7Q3 588 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 ABHD5Q8WTS1 349 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 FAM3DQ96BQ1 224 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 ARV1Q9H2C2 271 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 FRMPD3Q5JV73 1810 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 ELOA3DA6NLF2 546 aaPredicted RBP9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 ALOX12BO75342 701 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 OR5H8P0DN80 308 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 ELOA3BQ3SY89 546 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 TMEM268Q5VZI3 342 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 ELOA3Q8NG57 546 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 TSEN15Q8WW01 171 aaKnown RBP9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 APOOQ9BUR5 198 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 PLAGL1Q9UM63 463 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 GPR55Q9Y2T6 319 aaPredicted RBP9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 DCDC2BA2VCK2 349 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 NKX6-3A6NJ46 265 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 SEC11BP0C7V7 166 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 ARTNQ5T4W7 220 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 OLIG3Q7RTU3 272 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 OR9A1PQ8NGU1 263 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 LRRC3BQ96PB8 259 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 CMKLR1Q99788 373 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 ALKBH7Q9BT30 221 aaPredicted RBP9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 ANKRD10Q9NXR5 420 aa9.73□□□□□ -0.85
CLSTN3-207ENST00000537408 ATG2BQ96BY7 2078 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 MASP2O00187 686 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 KLF4O43474 513 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 IMPA1P29218 277 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 NPY4RP50391 375 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 CLDN2P57739 230 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 ERVFRD-1P60508 538 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 NUFIP2Q7Z417 695 aaKnown RBP9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 RCC1LQ96I51 464 aaKnown RBP9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 LRFN1Q9P244 771 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 FBXL17Q9UF56 701 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 CABIN1Q9Y6J0 2220 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 A6NCN8 305 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 H0YIZ8 118 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 DANCRP0C864 163 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 FGF5P12034 268 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 HLA-BQ31612 363 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 TEX38Q6PEX7 206 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 SLCO4C1Q6ZQN7 724 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 TMEM104Q8NE00 496 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 SLC26A10Q8NG04 563 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 STT3BQ8TCJ2 826 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 ACY3Q96HD9 319 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 DCBLD2Q96PD2 775 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 SLC2A8Q9NY64 477 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 NAGKQ9UJ70 344 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 A0A1B0GW64 132 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 A6NIZ1 184 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 NDUFS8O00217 210 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 CDC42EP2O14613 210 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 NUDT14O95848 222 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 EFEMP2O95967 443 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 CISD3P0C7P0 127 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 LYL1P12980 280 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 RPL19P84098 196 aaKnown RBP9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 RAB32Q13637 225 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms