RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 A6NLC8 198 aa11□□□□□ -0.65
PRKDC-206ENST00000536429 ANKRD65E5RJM6 399 aa11□□□□□ -0.65
PRKDC-206ENST00000536429 ZNF670-ZNF695F2Z2N8 137 aa11□□□□□ -0.65
PRKDC-206ENST00000536429 ZNF254O75437 659 aa11□□□□□ -0.65
PRKDC-206ENST00000536429 BAG2O95816 211 aa11□□□□□ -0.65
PRKDC-206ENST00000536429 IFNA2P01563 188 aa11□□□□□ -0.65
PRKDC-206ENST00000536429 IRF2P14316 349 aa11□□□□□ -0.65
PRKDC-206ENST00000536429 RPS2P15880 293 aaKnown RBP11□□□□□ -0.65
PRKDC-206ENST00000536429 ADRA2CP18825 462 aa11□□□□□ -0.65
PRKDC-206ENST00000536429 DCTDP32321 178 aa11□□□□□ -0.65
PRKDC-206ENST00000536429 THBS2P35442 1172 aa11□□□□□ -0.65
PRKDC-206ENST00000536429 ELF3P78545 371 aaPredicted RBP11□□□□□ -0.65
PRKDC-206ENST00000536429 POU4F2Q12837 409 aa11□□□□□ -0.65
PRKDC-206ENST00000536429 ZNF154Q13106 437 aa11□□□□□ -0.65
PRKDC-206ENST00000536429 PRDX4Q13162 271 aa11□□□□□ -0.65
PRKDC-206ENST00000536429 ZNF684Q5T5D7 378 aa11□□□□□ -0.65
PRKDC-206ENST00000536429 DCAF12L2Q5VW00 463 aa11□□□□□ -0.65
PRKDC-206ENST00000536429 KLBQ86Z14 1044 aa11□□□□□ -0.65
PRKDC-206ENST00000536429 C1orf87Q8N0U7 546 aa11□□□□□ -0.65
PRKDC-206ENST00000536429 MUC20Q8N307 709 aaPredicted RBP11□□□□□ -0.65
PRKDC-206ENST00000536429 GCSAMQ8N6F7 178 aa11□□□□□ -0.65
PRKDC-206ENST00000536429 SPERTQ8NA61 448 aa11□□□□□ -0.65
PRKDC-206ENST00000536429 PLPP7Q8NBV4 271 aa11□□□□□ -0.65
PRKDC-206ENST00000536429 CSNK2A3Q8NEV1 391 aa11□□□□□ -0.65
PRKDC-206ENST00000536429 OR1M1Q8NGA1 313 aa11□□□□□ -0.65
PRKDC-206ENST00000536429 OR10H4Q8NGA5 316 aa11□□□□□ -0.65
PRKDC-206ENST00000536429 HPSE2Q8WWQ2 592 aa11□□□□□ -0.65
PRKDC-206ENST00000536429 PIGCQ92535 297 aa11□□□□□ -0.65
PRKDC-206ENST00000536429 FAM71F1Q96KD3 344 aaPredicted RBP11□□□□□ -0.65
PRKDC-206ENST00000536429 MNTQ99583 582 aa11□□□□□ -0.65
PRKDC-206ENST00000536429 C9orf16Q9BUW7 83 aa11□□□□□ -0.65
PRKDC-206ENST00000536429 GPR84Q9NQS5 396 aa11□□□□□ -0.65
PRKDC-206ENST00000536429 IMPAD1Q9NX62 359 aa11□□□□□ -0.65
PRKDC-206ENST00000536429 NUFIP1Q9UHK0 495 aaKnown RBP11□□□□□ -0.65
PRKDC-206ENST00000536429 ORC6Q9Y5N6 252 aa11□□□□□ -0.65
PRKDC-206ENST00000536429 R4GMQ9 66 aa11□□□□□ -0.65
PRKDC-206ENST00000536429 IGHV3OR15-7A0A075B7D8 119 aa10.99□□□□□ -0.65
PRKDC-206ENST00000536429 A0A0G2JMP0 313 aa10.99□□□□□ -0.65
PRKDC-206ENST00000536429 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.99□□□□□ -0.65
PRKDC-206ENST00000536429 A0A0U1RQV5 110 aa10.99□□□□□ -0.65
PRKDC-206ENST00000536429 A0A0X1KG70 313 aa10.99□□□□□ -0.65
PRKDC-206ENST00000536429 hCG_1807616A0A1W2PRN6 198 aa10.99□□□□□ -0.65
PRKDC-206ENST00000536429 ACOD1A6NK06 481 aa10.99□□□□□ -0.65
PRKDC-206ENST00000536429 A8MXK9 166 aa10.99□□□□□ -0.65
PRKDC-206ENST00000536429 FOXH1O75593 365 aa10.99□□□□□ -0.65
PRKDC-206ENST00000536429 RPP14O95059 124 aaKnown RBP10.99□□□□□ -0.65
PRKDC-206ENST00000536429 CST4P01036 141 aa10.99□□□□□ -0.65
PRKDC-206ENST00000536429 TTRP02766 147 aa10.99□□□□□ -0.65
PRKDC-206ENST00000536429 GABRB1P18505 474 aa10.99□□□□□ -0.65
PRKDC-206ENST00000536429 PCMT1P22061 227 aa10.99□□□□□ -0.65
PRKDC-206ENST00000536429 GNALP38405 381 aa10.99□□□□□ -0.65
PRKDC-206ENST00000536429 ZNF85Q03923 595 aa10.99□□□□□ -0.65
PRKDC-206ENST00000536429 EGR3Q06889 387 aa10.99□□□□□ -0.65
PRKDC-206ENST00000536429 ZNF829Q3KNS6 432 aaPredicted RBP10.99□□□□□ -0.65
PRKDC-206ENST00000536429 ZBTB49Q6ZSB9 765 aa10.99□□□□□ -0.65
PRKDC-206ENST00000536429 C10orf67Q8IYJ2 551 aa10.99□□□□□ -0.65
PRKDC-206ENST00000536429 OR4M2Q8NGB6 313 aa10.99□□□□□ -0.65
PRKDC-206ENST00000536429 TRUB1Q8WWH5 349 aaKnown RBP10.99□□□□□ -0.65
PRKDC-206ENST00000536429 SEH1LQ96EE3 360 aa10.99□□□□□ -0.65
PRKDC-206ENST00000536429 C14orf119Q9NWQ9 140 aa10.99□□□□□ -0.65
PRKDC-206ENST00000536429 CTSZQ9UBR2 303 aa10.99□□□□□ -0.65
PRKDC-206ENST00000536429 GTF2A1LQ9UNN4 478 aa10.99□□□□□ -0.65
PRKDC-206ENST00000536429 SLC22A13Q9Y226 551 aa10.99□□□□□ -0.65
PRKDC-206ENST00000536429 A0A1B0GTI1 187 aa10.98□□□□□ -0.65
PRKDC-206ENST00000536429 LOC110117498-PIK3R3F6TDL0 507 aa10.98□□□□□ -0.65
PRKDC-206ENST00000536429 H3BSH0 61 aa10.98□□□□□ -0.65
PRKDC-206ENST00000536429 J3QRE1 110 aa10.98□□□□□ -0.65
PRKDC-206ENST00000536429 LGALS8O00214 317 aa10.98□□□□□ -0.65
PRKDC-206ENST00000536429 DLGAP1O14490 977 aa10.98□□□□□ -0.65
PRKDC-206ENST00000536429 CDIPTO14735 213 aa10.98□□□□□ -0.65
PRKDC-206ENST00000536429 PHYHO14832 338 aa10.98□□□□□ -0.65
PRKDC-206ENST00000536429 TNFRSF13BO14836 293 aaPredicted RBP10.98□□□□□ -0.65
PRKDC-206ENST00000536429 FCN3O75636 299 aa10.98□□□□□ -0.65
PRKDC-206ENST00000536429 FSTL3O95633 263 aa10.98□□□□□ -0.65
PRKDC-206ENST00000536429 LHBP01229 141 aa10.98□□□□□ -0.65
PRKDC-206ENST00000536429 OR2T7P0C7T2 308 aa10.98□□□□□ -0.65
PRKDC-206ENST00000536429 FAHP16930 419 aa10.98□□□□□ -0.65
PRKDC-206ENST00000536429 SNRPGP62308 76 aaKnown RBP10.98□□□□□ -0.65
PRKDC-206ENST00000536429 PAX2Q02962 417 aa10.98□□□□□ -0.65
PRKDC-206ENST00000536429 ESCO2Q56NI9 601 aa10.98□□□□□ -0.65
PRKDC-206ENST00000536429 CEP78Q5JTW2 689 aa10.98□□□□□ -0.65
PRKDC-206ENST00000536429 SLC25A30Q5SVS4 291 aa10.98□□□□□ -0.65
PRKDC-206ENST00000536429 BCL2L15Q5TBC7 163 aa10.98□□□□□ -0.65
PRKDC-206ENST00000536429 WDR82Q6UXN9 313 aa10.98□□□□□ -0.65
PRKDC-206ENST00000536429 ZNF841Q6ZN19 808 aa10.98□□□□□ -0.65
PRKDC-206ENST00000536429 COMMD2Q86X83 199 aa10.98□□□□□ -0.65
PRKDC-206ENST00000536429 ENTHD1Q8IYW4 607 aa10.98□□□□□ -0.65
PRKDC-206ENST00000536429 GALNT4Q8N4A0 578 aa10.98□□□□□ -0.65
PRKDC-206ENST00000536429 YIPF7Q8N8F6 280 aa10.98□□□□□ -0.65
PRKDC-206ENST00000536429 OR2T27Q8NH04 317 aa10.98□□□□□ -0.65
PRKDC-206ENST00000536429 LRRC29Q8WV35 223 aa10.98□□□□□ -0.65
PRKDC-206ENST00000536429 OR5P3Q8WZ94 311 aa10.98□□□□□ -0.65
PRKDC-206ENST00000536429 RPL3LQ92901 407 aaKnown RBP10.98□□□□□ -0.65
PRKDC-206ENST00000536429 RNF166Q96A37 237 aaPredicted RBP10.98□□□□□ -0.65
PRKDC-206ENST00000536429 RNFT2Q96EX2 444 aa10.98□□□□□ -0.65
PRKDC-206ENST00000536429 SSBP3Q9BWW4 388 aaPredicted RBP10.98□□□□□ -0.65
PRKDC-206ENST00000536429 TLNRD1Q9H1K6 362 aa10.98□□□□□ -0.65
PRKDC-206ENST00000536429 C7orf69Q9H7B7 122 aa10.98□□□□□ -0.65
PRKDC-206ENST00000536429 MIOXQ9UGB7 285 aa10.98□□□□□ -0.65
PRKDC-206ENST00000536429 ZNF391Q9UJN7 358 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms