RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 DCXRQ7Z4W1 244 aa9.19□□□□□ -0.94
CLSTN3-206ENST00000535668 VMO1Q7Z5L0 202 aa9.19□□□□□ -0.94
CLSTN3-206ENST00000535668 FTMTQ8N4E7 242 aa9.19□□□□□ -0.94
CLSTN3-206ENST00000535668 C19orf18Q8NEA5 215 aa9.19□□□□□ -0.94
CLSTN3-206ENST00000535668 SDR9C7Q8NEX9 313 aa9.19□□□□□ -0.94
CLSTN3-206ENST00000535668 OR2AE1Q8NHA4 323 aa9.19□□□□□ -0.94
CLSTN3-206ENST00000535668 LHX4Q969G2 390 aa9.19□□□□□ -0.94
CLSTN3-206ENST00000535668 SLAMF6Q96DU3 332 aa9.19□□□□□ -0.94
CLSTN3-206ENST00000535668 AJUBAQ96IF1 538 aa9.19□□□□□ -0.94
CLSTN3-206ENST00000535668 RAB3IPQ96QF0 476 aaPredicted RBP9.19□□□□□ -0.94
CLSTN3-206ENST00000535668 CDCA4Q9BXL8 241 aa9.19□□□□□ -0.94
CLSTN3-206ENST00000535668 DGCR6LQ9BY27 220 aa9.19□□□□□ -0.94
CLSTN3-206ENST00000535668 RANBP3Q9H6Z4 567 aaPredicted RBP9.19□□□□□ -0.94
CLSTN3-206ENST00000535668 METTL8Q9H825 291 aaKnown RBP9.19□□□□□ -0.94
CLSTN3-206ENST00000535668 TCF7L1Q9HCS4 588 aa9.19□□□□□ -0.94
CLSTN3-206ENST00000535668 HAO2Q9NYQ3 351 aa9.19□□□□□ -0.94
CLSTN3-206ENST00000535668 LRP12Q9Y561 859 aa9.19□□□□□ -0.94
CLSTN3-206ENST00000535668 LYVE1Q9Y5Y7 322 aa9.19□□□□□ -0.94
CLSTN3-206ENST00000535668 PLXNB1O43157 2135 aa9.19□□□□□ -0.94
CLSTN3-206ENST00000535668 DHRS12A0PJE2 317 aa9.18□□□□□ -0.94
CLSTN3-206ENST00000535668 ANKRD30BLA7E2S9 258 aa9.18□□□□□ -0.94
CLSTN3-206ENST00000535668 GMNNO75496 209 aa9.18□□□□□ -0.94
CLSTN3-206ENST00000535668 HLA-DQA2P01906 255 aa9.18□□□□□ -0.94
CLSTN3-206ENST00000535668 OPN1MWP04001 364 aa9.18□□□□□ -0.94
CLSTN3-206ENST00000535668 OPN1MW2P0DN77 364 aa9.18□□□□□ -0.94
CLSTN3-206ENST00000535668 OPN1MW3P0DN78 364 aa9.18□□□□□ -0.94
CLSTN3-206ENST00000535668 OPRL1P41146 370 aa9.18□□□□□ -0.94
CLSTN3-206ENST00000535668 EFNB2P52799 333 aa9.18□□□□□ -0.94
CLSTN3-206ENST00000535668 HOXA4Q00056 320 aaPredicted RBP9.18□□□□□ -0.94
CLSTN3-206ENST00000535668 IL5RAQ01344 420 aa9.18□□□□□ -0.94
CLSTN3-206ENST00000535668 SPIBQ01892 262 aa9.18□□□□□ -0.94
CLSTN3-206ENST00000535668 BEAN1Q3B7T3 259 aa9.18□□□□□ -0.94
CLSTN3-206ENST00000535668 WDR38Q5JTN6 314 aa9.18□□□□□ -0.94
CLSTN3-206ENST00000535668 LIAT1Q6ZQX7 453 aa9.18□□□□□ -0.94
CLSTN3-206ENST00000535668 REC114Q7Z4M0 266 aa9.18□□□□□ -0.94
CLSTN3-206ENST00000535668 SLC37A3Q8NCC5 494 aa9.18□□□□□ -0.94
CLSTN3-206ENST00000535668 PROKR2Q8NFJ6 384 aa9.18□□□□□ -0.94
CLSTN3-206ENST00000535668 ANGPTL6Q8NI99 470 aa9.18□□□□□ -0.94
CLSTN3-206ENST00000535668 MED30Q96HR3 178 aa9.18□□□□□ -0.94
CLSTN3-206ENST00000535668 BTBD10Q9BSF8 475 aa9.18□□□□□ -0.94
CLSTN3-206ENST00000535668 FAM96BQ9Y3D0 163 aa9.18□□□□□ -0.94
CLSTN3-206ENST00000535668 MAB21L2Q9Y586 359 aa9.18□□□□□ -0.94
CLSTN3-206ENST00000535668 TRBV23-1A0A0A0MS06 115 aa9.17□□□□□ -0.94
CLSTN3-206ENST00000535668 ZNF593O00488 134 aaPredicted RBP9.17□□□□□ -0.94
CLSTN3-206ENST00000535668 NPFFO15130 113 aa9.17□□□□□ -0.94
CLSTN3-206ENST00000535668 SIGLEC5O15389 551 aa9.17□□□□□ -0.94
CLSTN3-206ENST00000535668 FABP3P05413 133 aa9.17□□□□□ -0.94
CLSTN3-206ENST00000535668 ACAA1P09110 424 aaPredicted RBP9.17□□□□□ -0.94
CLSTN3-206ENST00000535668 SPI1P17947 270 aa9.17□□□□□ -0.94
CLSTN3-206ENST00000535668 EEF1B2P24534 225 aaKnown RBP9.17□□□□□ -0.94
CLSTN3-206ENST00000535668 RRM2P31350 389 aa9.17□□□□□ -0.94
CLSTN3-206ENST00000535668 GSK3AP49840 483 aa9.17□□□□□ -0.94
CLSTN3-206ENST00000535668 LRRC10Q5BKY1 277 aa9.17□□□□□ -0.94
CLSTN3-206ENST00000535668 SAMD4BQ5PRF9 694 aaKnown RBP9.17□□□□□ -0.94
CLSTN3-206ENST00000535668 SAMD5Q5TGI4 173 aa9.17□□□□□ -0.94
CLSTN3-206ENST00000535668 DHRS7BQ6IAN0 325 aaPredicted RBP9.17□□□□□ -0.94
CLSTN3-206ENST00000535668 DPY19L4Q7Z388 723 aa9.17□□□□□ -0.94
CLSTN3-206ENST00000535668 CPLX4Q7Z7G2 160 aa9.17□□□□□ -0.94
CLSTN3-206ENST00000535668 PGAM4Q8N0Y7 254 aa9.17□□□□□ -0.94
CLSTN3-206ENST00000535668 Q8N2B8 174 aa9.17□□□□□ -0.94
CLSTN3-206ENST00000535668 SCCPDHQ8NBX0 429 aa9.17□□□□□ -0.94
CLSTN3-206ENST00000535668 OR52L1Q8NGH7 329 aa9.17□□□□□ -0.94
CLSTN3-206ENST00000535668 OR8D4Q8NGM9 314 aa9.17□□□□□ -0.94
CLSTN3-206ENST00000535668 WIPF2Q8TF74 440 aaPredicted RBP9.17□□□□□ -0.94
CLSTN3-206ENST00000535668 LRRC29Q8WV35 223 aa9.17□□□□□ -0.94
CLSTN3-206ENST00000535668 OR5P3Q8WZ94 311 aa9.17□□□□□ -0.94
CLSTN3-206ENST00000535668 UBE2FQ969M7 185 aa9.17□□□□□ -0.94
CLSTN3-206ENST00000535668 MCUR1Q96AQ8 359 aa9.17□□□□□ -0.94
CLSTN3-206ENST00000535668 PKP2Q99959 881 aa9.17□□□□□ -0.94
CLSTN3-206ENST00000535668 COPS4Q9BT78 406 aa9.17□□□□□ -0.94
CLSTN3-206ENST00000535668 RASSF4Q9H2L5 321 aa9.17□□□□□ -0.94
CLSTN3-206ENST00000535668 CMC2Q9NRP2 79 aa9.17□□□□□ -0.94
CLSTN3-206ENST00000535668 ZNF222Q9UK12 451 aa9.17□□□□□ -0.94
CLSTN3-206ENST00000535668 DNAH3Q8TD57 4116 aa9.17□□□□□ -0.94
CLSTN3-206ENST00000535668 ZNF816-ZNF321PA0A0X1KG74 233 aa9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 MEGF11A6BM72 1044 aa9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 BTBD17A6NE02 478 aa9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 ERICH4A6NGS2 130 aa9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 ACOD1A6NK06 481 aa9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 VGLL3A8MV65 326 aa9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 ACOT8O14734 319 aa9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 ARPC2O15144 300 aa9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 NDUFB3O43676 98 aa9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 TSPAN15O95858 294 aa9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 GRPP07492 148 aa9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 PYCR1P32322 319 aa9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 DBPQ10586 325 aaPredicted RBP9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 HERPUD1Q15011 391 aa9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 SLC35F1Q5T1Q4 408 aa9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 SLC35E4Q6ICL7 350 aa9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 HCP5Q6MZN7 132 aa9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 SHFQ7M4L6 423 aa9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 TIGD4Q8IY51 512 aa9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 RNF148Q8N7C7 305 aa9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 ZNF454Q8N9F8 522 aa9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 OR2T33Q8NG76 320 aa9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 OR5D13Q8NGL4 314 aa9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 OR8S1Q8NH09 359 aa9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 SDSLQ96GA7 329 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms