RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 CANT1Q8WVQ1 401 aa13.43□□□□□ -0.26
CLSTN3-204ENST00000535313 AMELYQ99218 206 aa13.43□□□□□ -0.26
CLSTN3-204ENST00000535313 PAPOLGQ9BWT3 736 aaKnown RBP13.43□□□□□ -0.26
CLSTN3-204ENST00000535313 TEX12Q9BXU0 123 aa13.43□□□□□ -0.26
CLSTN3-204ENST00000535313 RASSF4Q9H2L5 321 aa13.43□□□□□ -0.26
CLSTN3-204ENST00000535313 IGHV3OR15-7A0A075B7D8 119 aa13.42□□□□□ -0.26
CLSTN3-204ENST00000535313 ANXA2P2A6NMY6 339 aa13.42□□□□□ -0.26
CLSTN3-204ENST00000535313 DVL1O14640 695 aa13.42□□□□□ -0.26
CLSTN3-204ENST00000535313 TMPRSS2O15393 492 aa13.42□□□□□ -0.26
CLSTN3-204ENST00000535313 HOXA3O43365 443 aaPredicted RBP13.42□□□□□ -0.26
CLSTN3-204ENST00000535313 ECDO95905 644 aaPredicted RBP13.42□□□□□ -0.26
CLSTN3-204ENST00000535313 LYNP07948 512 aa13.42□□□□□ -0.26
CLSTN3-204ENST00000535313 SFTPBP07988 381 aa13.42□□□□□ -0.26
CLSTN3-204ENST00000535313 OSMP13725 252 aa13.42□□□□□ -0.26
CLSTN3-204ENST00000535313 MUC1P15941 1255 aaPredicted RBP13.42□□□□□ -0.26
CLSTN3-204ENST00000535313 NAA10P41227 235 aaPredicted RBP13.42□□□□□ -0.26
CLSTN3-204ENST00000535313 IL5RAQ01344 420 aa13.42□□□□□ -0.26
CLSTN3-204ENST00000535313 POU4F2Q12837 409 aa13.42□□□□□ -0.26
CLSTN3-204ENST00000535313 C11orf91Q3C1V1 193 aa13.42□□□□□ -0.26
CLSTN3-204ENST00000535313 KLHL12Q53G59 568 aa13.42□□□□□ -0.26
CLSTN3-204ENST00000535313 C16orf87Q6PH81 154 aa13.42□□□□□ -0.26
CLSTN3-204ENST00000535313 TMEM179BQ7Z7N9 219 aa13.42□□□□□ -0.26
CLSTN3-204ENST00000535313 OTOSQ8NHW6 89 aa13.42□□□□□ -0.26
CLSTN3-204ENST00000535313 WDFY2Q96P53 400 aa13.42□□□□□ -0.26
CLSTN3-204ENST00000535313 MICU1Q9BPX6 476 aa13.42□□□□□ -0.26
CLSTN3-204ENST00000535313 YY1AP1Q9H869 796 aa13.42□□□□□ -0.26
CLSTN3-204ENST00000535313 UNKLQ9H9P5 680 aaKnown RBP13.42□□□□□ -0.26
CLSTN3-204ENST00000535313 SMURF1Q9HCE7 757 aa13.42□□□□□ -0.26
CLSTN3-204ENST00000535313 NOX4Q9NPH5 578 aa13.42□□□□□ -0.26
CLSTN3-204ENST00000535313 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.42□□□□□ -0.26
CLSTN3-204ENST00000535313 KAAG1Q9UBP8 84 aa13.42□□□□□ -0.26
CLSTN3-204ENST00000535313 RHBDD3Q9Y3P4 386 aa13.42□□□□□ -0.26
CLSTN3-204ENST00000535313 POM121CA8CG34 1229 aa13.41□□□□□ -0.26
CLSTN3-204ENST00000535313 SRRM5B3KS81 715 aa13.41□□□□□ -0.26
CLSTN3-204ENST00000535313 PRODHO43272 600 aa13.41□□□□□ -0.26
CLSTN3-204ENST00000535313 SELENOFO60613 162 aa13.41□□□□□ -0.26
CLSTN3-204ENST00000535313 RPS7P62081 194 aaKnown RBP13.41□□□□□ -0.26
CLSTN3-204ENST00000535313 RUSC1-AS1Q66K80 236 aa13.41□□□□□ -0.26
CLSTN3-204ENST00000535313 BTN2A1Q7KYR7 527 aa13.41□□□□□ -0.26
CLSTN3-204ENST00000535313 WDR86Q86TI4 376 aa13.41□□□□□ -0.26
CLSTN3-204ENST00000535313 SPATA24Q86W54 205 aa13.41□□□□□ -0.26
CLSTN3-204ENST00000535313 C11orf53Q8IXP5 236 aa13.41□□□□□ -0.26
CLSTN3-204ENST00000535313 GATAD2BQ8WXI9 593 aa13.41□□□□□ -0.26
CLSTN3-204ENST00000535313 ST8SIA4Q92187 359 aa13.41□□□□□ -0.26
CLSTN3-204ENST00000535313 TBX15Q96SF7 602 aa13.41□□□□□ -0.26
CLSTN3-204ENST00000535313 PRDM13Q9H4Q3 707 aa13.41□□□□□ -0.26
CLSTN3-204ENST00000535313 ABCB9Q9NP78 766 aa13.41□□□□□ -0.26
CLSTN3-204ENST00000535313 ZNF319Q9P2F9 582 aa13.41□□□□□ -0.26
CLSTN3-204ENST00000535313 MPC1Q9Y5U8 109 aa13.41□□□□□ -0.26
CLSTN3-204ENST00000535313 GYG2O15488 501 aa13.4□□□□□ -0.26
CLSTN3-204ENST00000535313 ANXA8P13928 327 aa13.4□□□□□ -0.26
CLSTN3-204ENST00000535313 MMP9P14780 707 aa13.4□□□□□ -0.26
CLSTN3-204ENST00000535313 CSNK2BP67870 215 aa13.4□□□□□ -0.26
CLSTN3-204ENST00000535313 CDK5Q00535 292 aa13.4□□□□□ -0.26
CLSTN3-204ENST00000535313 FLOT2Q14254 428 aa13.4□□□□□ -0.26
CLSTN3-204ENST00000535313 PDCD1Q15116 288 aa13.4□□□□□ -0.26
CLSTN3-204ENST00000535313 DNAL1Q4LDG9 190 aa13.4□□□□□ -0.26
CLSTN3-204ENST00000535313 SLC35D3Q5M8T2 416 aa13.4□□□□□ -0.26
CLSTN3-204ENST00000535313 WDR82Q6UXN9 313 aa13.4□□□□□ -0.26
CLSTN3-204ENST00000535313 Q6YL49 198 aa13.4□□□□□ -0.26
CLSTN3-204ENST00000535313 SLC36A1Q7Z2H8 476 aa13.4□□□□□ -0.26
CLSTN3-204ENST00000535313 CPOQ8IVL8 374 aa13.4□□□□□ -0.26
CLSTN3-204ENST00000535313 HS3ST5Q8IZT8 346 aa13.4□□□□□ -0.26
CLSTN3-204ENST00000535313 GALNT4Q8N4A0 578 aa13.4□□□□□ -0.26
CLSTN3-204ENST00000535313 TMIGD2Q96BF3 282 aa13.4□□□□□ -0.26
CLSTN3-204ENST00000535313 C12orf43Q96C57 262 aaKnown RBP13.4□□□□□ -0.26
CLSTN3-204ENST00000535313 FAM71F1Q96KD3 344 aaPredicted RBP13.4□□□□□ -0.26
CLSTN3-204ENST00000535313 CCL13Q99616 98 aa13.4□□□□□ -0.26
CLSTN3-204ENST00000535313 RTL8AQ9BWD3 113 aa13.4□□□□□ -0.26
CLSTN3-204ENST00000535313 TNFRSF19Q9NS68 423 aa13.4□□□□□ -0.26
CLSTN3-204ENST00000535313 CENPVL3A0A0U1RRI6 287 aa13.39□□□□□ -0.27
CLSTN3-204ENST00000535313 CDIPTO14735 213 aa13.39□□□□□ -0.27
CLSTN3-204ENST00000535313 CRYBA1P05813 215 aa13.39□□□□□ -0.27
CLSTN3-204ENST00000535313 PRKACGP22612 351 aa13.39□□□□□ -0.27
CLSTN3-204ENST00000535313 PSMA6P60900 246 aaKnown RBP13.39□□□□□ -0.27
CLSTN3-204ENST00000535313 ARF6P62330 175 aa13.39□□□□□ -0.27
CLSTN3-204ENST00000535313 WDR38Q5JTN6 314 aa13.39□□□□□ -0.27
CLSTN3-204ENST00000535313 TMEM86BQ8N661 226 aa13.39□□□□□ -0.27
CLSTN3-204ENST00000535313 LHX4Q969G2 390 aa13.39□□□□□ -0.27
CLSTN3-204ENST00000535313 ITPKCQ96DU7 683 aa13.39□□□□□ -0.27
CLSTN3-204ENST00000535313 SIRPDQ9H106 197 aa13.39□□□□□ -0.27
CLSTN3-204ENST00000535313 TLNRD1Q9H1K6 362 aa13.39□□□□□ -0.27
CLSTN3-204ENST00000535313 PPP1R3EQ9H7J1 279 aa13.39□□□□□ -0.27
CLSTN3-204ENST00000535313 NIPAL2Q9H841 368 aa13.39□□□□□ -0.27
CLSTN3-204ENST00000535313 CNTD2Q9H8S5 307 aa13.39□□□□□ -0.27
CLSTN3-204ENST00000535313 DNAJB9Q9UBS3 223 aa13.39□□□□□ -0.27
CLSTN3-204ENST00000535313 RPUSD1Q9UJJ7 312 aaKnown RBP13.39□□□□□ -0.27
CLSTN3-204ENST00000535313 ZNF391Q9UJN7 358 aa13.39□□□□□ -0.27
CLSTN3-204ENST00000535313 LAMP5Q9UJQ1 280 aa13.39□□□□□ -0.27
CLSTN3-204ENST00000535313 PKD1L1Q8TDX9 2849 aa13.39□□□□□ -0.27
CLSTN3-204ENST00000535313 IGHV1-69DA0A0B4J2H0 117 aa13.38□□□□□ -0.27
CLSTN3-204ENST00000535313 TMEM210A6NLX4 147 aa13.38□□□□□ -0.27
CLSTN3-204ENST00000535313 ZNF850A8MQ14 1090 aa13.38□□□□□ -0.27
CLSTN3-204ENST00000535313 NDUFB3O43676 98 aa13.38□□□□□ -0.27
CLSTN3-204ENST00000535313 FKBP6O75344 327 aa13.38□□□□□ -0.27
CLSTN3-204ENST00000535313 CST4P01036 141 aa13.38□□□□□ -0.27
CLSTN3-204ENST00000535313 IGHV1-69P01742 117 aa13.38□□□□□ -0.27
CLSTN3-204ENST00000535313 PRDX4Q13162 271 aa13.38□□□□□ -0.27
CLSTN3-204ENST00000535313 PRR31Q5SQ13 230 aa13.38□□□□□ -0.27
CLSTN3-204ENST00000535313 KCTD8Q6ZWB6 473 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms