RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 H7C1C5 153 aa8.21□□□□□ -1.1
CSDE1-215ENST00000533818 ANP32DO95626 131 aa8.21□□□□□ -1.1
CSDE1-215ENST00000533818 TSPAN19P0C672 248 aa8.21□□□□□ -1.1
CSDE1-215ENST00000533818 ACSM4P0C7M7 580 aa8.21□□□□□ -1.1
CSDE1-215ENST00000533818 SDHAP31040 664 aa8.21□□□□□ -1.1
CSDE1-215ENST00000533818 BRS3P32247 399 aa8.21□□□□□ -1.1
CSDE1-215ENST00000533818 CTXN1P60606 82 aa8.21□□□□□ -1.1
CSDE1-215ENST00000533818 RAP1BP61224 184 aa8.21□□□□□ -1.1
CSDE1-215ENST00000533818 LCN6P62502 163 aa8.21□□□□□ -1.1
CSDE1-215ENST00000533818 RAP1AP62834 184 aa8.21□□□□□ -1.1
CSDE1-215ENST00000533818 MXRA7P84157 204 aa8.21□□□□□ -1.1
CSDE1-215ENST00000533818 ZNF92Q03936 586 aa8.21□□□□□ -1.1
CSDE1-215ENST00000533818 IL18R1Q13478 541 aa8.21□□□□□ -1.1
CSDE1-215ENST00000533818 PCLAFQ15004 111 aa8.21□□□□□ -1.1
CSDE1-215ENST00000533818 ALG10Q5BKT4 473 aa8.21□□□□□ -1.1
CSDE1-215ENST00000533818 CXorf66Q5JRM2 361 aaPredicted RBP8.21□□□□□ -1.1
CSDE1-215ENST00000533818 ENTPD8Q5MY95 495 aa8.21□□□□□ -1.1
CSDE1-215ENST00000533818 LINC00336Q6ZUF6 198 aa8.21□□□□□ -1.1
CSDE1-215ENST00000533818 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.21□□□□□ -1.1
CSDE1-215ENST00000533818 CNPY4Q8N129 248 aa8.21□□□□□ -1.1
CSDE1-215ENST00000533818 DPP10Q8N608 796 aa8.21□□□□□ -1.1
CSDE1-215ENST00000533818 GJC3Q8NFK1 279 aa8.21□□□□□ -1.1
CSDE1-215ENST00000533818 OR11H1Q8NG94 326 aa8.21□□□□□ -1.1
CSDE1-215ENST00000533818 OR6Q1Q8NGQ2 317 aa8.21□□□□□ -1.1
CSDE1-215ENST00000533818 VPS33AQ96AX1 596 aa8.21□□□□□ -1.1
CSDE1-215ENST00000533818 MPP4Q96JB8 637 aa8.21□□□□□ -1.1
CSDE1-215ENST00000533818 ZNF426Q9BUY5 554 aa8.21□□□□□ -1.1
CSDE1-215ENST00000533818 HIPK2Q9H2X6 1198 aa8.21□□□□□ -1.1
CSDE1-215ENST00000533818 EVA1AQ9H8M9 152 aa8.21□□□□□ -1.1
CSDE1-215ENST00000533818 RPS6KA6Q9UK32 745 aa8.21□□□□□ -1.1
CSDE1-215ENST00000533818 POLR1DQ9Y2S0 133 aa8.21□□□□□ -1.1
CSDE1-215ENST00000533818 BOLA1Q9Y3E2 137 aa8.21□□□□□ -1.1
CSDE1-215ENST00000533818 TRAPPC13A5PLN9 417 aa8.2□□□□□ -1.1
CSDE1-215ENST00000533818 OR2AT4A6NND4 320 aa8.2□□□□□ -1.1
CSDE1-215ENST00000533818 IMPA2O14732 288 aa8.2□□□□□ -1.1
CSDE1-215ENST00000533818 PSPNO60542 156 aa8.2□□□□□ -1.1
CSDE1-215ENST00000533818 BRI3O95415 125 aa8.2□□□□□ -1.1
CSDE1-215ENST00000533818 MT-ND1P03886 318 aa8.2□□□□□ -1.1
CSDE1-215ENST00000533818 UFM1P61960 85 aa8.2□□□□□ -1.1
CSDE1-215ENST00000533818 RGNQ15493 299 aa8.2□□□□□ -1.1
CSDE1-215ENST00000533818 SNAPC1Q16533 368 aa8.2□□□□□ -1.1
CSDE1-215ENST00000533818 C8orf74Q6P047 294 aa8.2□□□□□ -1.1
CSDE1-215ENST00000533818 SLC2A7Q6PXP3 512 aa8.2□□□□□ -1.1
CSDE1-215ENST00000533818 OR4M1Q8NGD0 313 aa8.2□□□□□ -1.1
CSDE1-215ENST00000533818 NFKBIDQ8NI38 313 aa8.2□□□□□ -1.1
CSDE1-215ENST00000533818 SGTBQ96EQ0 304 aa8.2□□□□□ -1.1
CSDE1-215ENST00000533818 RERGLQ9H628 205 aa8.2□□□□□ -1.1
CSDE1-215ENST00000533818 TUBA4BQ9H853 241 aa8.2□□□□□ -1.1
CSDE1-215ENST00000533818 GRPEL1Q9HAV7 217 aa8.2□□□□□ -1.1
CSDE1-215ENST00000533818 NLKQ9UBE8 527 aa8.2□□□□□ -1.1
CSDE1-215ENST00000533818 KIAA2026Q5HYC2 2103 aa8.2□□□□□ -1.1
CSDE1-215ENST00000533818 C17orf98A8MV24 154 aa8.19□□□□□ -1.1
CSDE1-215ENST00000533818 PTP4A3O75365 173 aa8.19□□□□□ -1.1
CSDE1-215ENST00000533818 TIPRLO75663 272 aa8.19□□□□□ -1.1
CSDE1-215ENST00000533818 OR8U8P0C7N1 319 aa8.19□□□□□ -1.1
CSDE1-215ENST00000533818 ZCCHC18P0CG32 403 aa8.19□□□□□ -1.1
CSDE1-215ENST00000533818 ARSBP15848 533 aa8.19□□□□□ -1.1
CSDE1-215ENST00000533818 PTMSP20962 102 aa8.19□□□□□ -1.1
CSDE1-215ENST00000533818 IL12AP29459 219 aa8.19□□□□□ -1.1
CSDE1-215ENST00000533818 HIST1H3AP68431 136 aa8.19□□□□□ -1.1
CSDE1-215ENST00000533818 GABPB1Q06547 395 aaPredicted RBP8.19□□□□□ -1.1
CSDE1-215ENST00000533818 ZNF273Q14593 569 aa8.19□□□□□ -1.1
CSDE1-215ENST00000533818 KRTAP27-1Q3LI81 207 aa8.19□□□□□ -1.1
CSDE1-215ENST00000533818 GTDC1Q4AE62 458 aa8.19□□□□□ -1.1
CSDE1-215ENST00000533818 HIST2H3PS2Q5TEC6 136 aa8.19□□□□□ -1.1
CSDE1-215ENST00000533818 REEP3Q6NUK4 255 aa8.19□□□□□ -1.1
CSDE1-215ENST00000533818 CEMP1Q6PRD7 247 aaPredicted RBP8.19□□□□□ -1.1
CSDE1-215ENST00000533818 TMPRSS11FQ6ZWK6 438 aa8.19□□□□□ -1.1
CSDE1-215ENST00000533818 HIST2H3AQ71DI3 136 aa8.19□□□□□ -1.1
CSDE1-215ENST00000533818 CALHM1Q8IU99 346 aa8.19□□□□□ -1.1
CSDE1-215ENST00000533818 OR56B2PQ8NGI1 322 aa8.19□□□□□ -1.1
CSDE1-215ENST00000533818 OR2T27Q8NH04 317 aa8.19□□□□□ -1.1
CSDE1-215ENST00000533818 OR2AE1Q8NHA4 323 aa8.19□□□□□ -1.1
CSDE1-215ENST00000533818 PFN4Q8NHR9 129 aa8.19□□□□□ -1.1
CSDE1-215ENST00000533818 MZB1Q8WU39 189 aa8.19□□□□□ -1.1
CSDE1-215ENST00000533818 C4orf3Q8WVX3 66 aa8.19□□□□□ -1.1
CSDE1-215ENST00000533818 TBC1D23Q9NUY8 699 aa8.19□□□□□ -1.1
CSDE1-215ENST00000533818 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.19□□□□□ -1.1
CSDE1-215ENST00000533818 IGKV1D-17A0A075B6S4 117 aa8.18□□□□□ -1.1
CSDE1-215ENST00000533818 TEX13CA0A0J9YWL9 993 aa8.18□□□□□ -1.1
CSDE1-215ENST00000533818 ANKRD30BLA7E2S9 258 aa8.18□□□□□ -1.1
CSDE1-215ENST00000533818 C12orf77C9JDV5 145 aa8.18□□□□□ -1.1
CSDE1-215ENST00000533818 OVOL1O14753 267 aa8.18□□□□□ -1.1
CSDE1-215ENST00000533818 AKR7A2O43488 359 aa8.18□□□□□ -1.1
CSDE1-215ENST00000533818 VIMP08670 466 aaKnown RBP8.18□□□□□ -1.1
CSDE1-215ENST00000533818 ALDH3A1P30838 453 aa8.18□□□□□ -1.1
CSDE1-215ENST00000533818 MDH1P40925 334 aaKnown RBP8.18□□□□□ -1.1
CSDE1-215ENST00000533818 PNLIPRP3Q17RR3 467 aa8.18□□□□□ -1.1
CSDE1-215ENST00000533818 LCN8Q6JVE9 175 aa8.18□□□□□ -1.1
CSDE1-215ENST00000533818 CORO6Q6QEF8 472 aa8.18□□□□□ -1.1
CSDE1-215ENST00000533818 TSEN54Q7Z6J9 526 aaKnown RBP8.18□□□□□ -1.1
CSDE1-215ENST00000533818 GLB1L2Q8IW92 636 aa8.18□□□□□ -1.1
CSDE1-215ENST00000533818 STPG2Q8N412 459 aa8.18□□□□□ -1.1
CSDE1-215ENST00000533818 OR6T1Q8NGN1 323 aa8.18□□□□□ -1.1
CSDE1-215ENST00000533818 OR10Z1Q8NGY1 313 aa8.18□□□□□ -1.1
CSDE1-215ENST00000533818 LIPHQ8WWY8 451 aa8.18□□□□□ -1.1
CSDE1-215ENST00000533818 DCUN1D4Q92564 292 aa8.18□□□□□ -1.1
CSDE1-215ENST00000533818 ZIM3Q96PE6 472 aa8.18□□□□□ -1.1
CSDE1-215ENST00000533818 TSPYL1Q9H0U9 437 aa8.18□□□□□ -1.1
CSDE1-215ENST00000533818 GHITMQ9H3K2 345 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms