RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 RDH8Q9NYR8 311 aa16.93■□□□□ 0.3
UBXN1-215ENST00000533476 KCNK7Q9Y2U2 307 aa16.93■□□□□ 0.3
UBXN1-215ENST00000533476 NCOA6Q14686 2063 aaPredicted RBP16.93■□□□□ 0.3
UBXN1-215ENST00000533476 PCSK5Q92824 1860 aa16.93■□□□□ 0.3
UBXN1-215ENST00000533476 HIST1H1DP16402 221 aaKnown RBP16.92■□□□□ 0.3
UBXN1-215ENST00000533476 CARD18P57730 90 aa16.92■□□□□ 0.3
UBXN1-215ENST00000533476 SRSF4Q08170 494 aaKnown RBP16.92■□□□□ 0.3
UBXN1-215ENST00000533476 DHRS2Q13268 280 aa16.92■□□□□ 0.3
UBXN1-215ENST00000533476 SLC22A6Q4U2R8 563 aa16.92■□□□□ 0.3
UBXN1-215ENST00000533476 CLVS2Q5SYC1 327 aa16.92■□□□□ 0.3
UBXN1-215ENST00000533476 OR52W1Q6IF63 320 aa16.92■□□□□ 0.3
UBXN1-215ENST00000533476 RGS7BPQ6MZT1 257 aaPredicted RBP16.92■□□□□ 0.3
UBXN1-215ENST00000533476 PNLDC1Q8NA58 520 aaKnown RBP16.92■□□□□ 0.3
UBXN1-215ENST00000533476 ZBTB44Q8NCP5 570 aa16.92■□□□□ 0.3
UBXN1-215ENST00000533476 PP6455Q8WZ26 134 aa16.92■□□□□ 0.3
UBXN1-215ENST00000533476 SPTSSAQ969W0 71 aa16.92■□□□□ 0.3
UBXN1-215ENST00000533476 RAB3CQ96E17 227 aa16.92■□□□□ 0.3
UBXN1-215ENST00000533476 FBXO17Q96EF6 278 aa16.92■□□□□ 0.3
UBXN1-215ENST00000533476 REG4Q9BYZ8 158 aa16.92■□□□□ 0.3
UBXN1-215ENST00000533476 ARRDC1-AS1Q9H2J1 176 aa16.92■□□□□ 0.3
UBXN1-215ENST00000533476 P4HTMQ9NXG6 502 aa16.92■□□□□ 0.3
UBXN1-215ENST00000533476 GHRLQ9UBU3 117 aa16.92■□□□□ 0.3
UBXN1-215ENST00000533476 MRPS18CQ9Y3D5 142 aaKnown RBP16.92■□□□□ 0.3
UBXN1-215ENST00000533476 M0R135 149 aa16.92■□□□□ 0.3
UBXN1-215ENST00000533476 ARPC5O15511 151 aa16.92■□□□□ 0.3
UBXN1-215ENST00000533476 RFPL3SP0C7P2 107 aa16.92■□□□□ 0.3
UBXN1-215ENST00000533476 HRH1P35367 487 aa16.92■□□□□ 0.3
UBXN1-215ENST00000533476 ALDH3B1P43353 468 aa16.92■□□□□ 0.3
UBXN1-215ENST00000533476 ABLIM2Q6H8Q1 611 aa16.92■□□□□ 0.3
UBXN1-215ENST00000533476 RTN4RL2Q86UN3 420 aa16.92■□□□□ 0.3
UBXN1-215ENST00000533476 SLC25A42Q86VD7 318 aa16.92■□□□□ 0.3
UBXN1-215ENST00000533476 OR56B1Q8NGI3 324 aa16.92■□□□□ 0.3
UBXN1-215ENST00000533476 MRGPRFQ96AM1 343 aa16.92■□□□□ 0.3
UBXN1-215ENST00000533476 C10orf35Q96D05 121 aa16.92■□□□□ 0.3
UBXN1-215ENST00000533476 ZNF799Q96GE5 643 aa16.92■□□□□ 0.3
UBXN1-215ENST00000533476 LIN37Q96GY3 246 aaPredicted RBP16.92■□□□□ 0.3
UBXN1-215ENST00000533476 ADGRG7Q96K78 797 aa16.92■□□□□ 0.3
UBXN1-215ENST00000533476 SPRY4Q9C004 299 aa16.92■□□□□ 0.3
UBXN1-215ENST00000533476 PLEK2Q9NYT0 353 aa16.92■□□□□ 0.3
UBXN1-215ENST00000533476 ZNF224Q9NZL3 707 aa16.92■□□□□ 0.3
UBXN1-215ENST00000533476 RFPL4AA6NLU0 287 aa16.91■□□□□ 0.3
UBXN1-215ENST00000533476 ZNF716A6NP11 495 aa16.91■□□□□ 0.3
UBXN1-215ENST00000533476 RFPL4AL1F8VTS6 287 aa16.91■□□□□ 0.3
UBXN1-215ENST00000533476 NAT1P18440 290 aa16.91■□□□□ 0.3
UBXN1-215ENST00000533476 HOXD11P31277 338 aaPredicted RBP16.91■□□□□ 0.3
UBXN1-215ENST00000533476 CD96P40200 585 aa16.91■□□□□ 0.3
UBXN1-215ENST00000533476 KISS1Q15726 138 aa16.91■□□□□ 0.3
UBXN1-215ENST00000533476 PNLIPRP3Q17RR3 467 aa16.91■□□□□ 0.3
UBXN1-215ENST00000533476 PLAC9Q5JTB6 97 aa16.91■□□□□ 0.3
UBXN1-215ENST00000533476 LY6G6FQ5SQ64 297 aa16.91■□□□□ 0.3
UBXN1-215ENST00000533476 LPCAT3Q6P1A2 487 aa16.91■□□□□ 0.3
UBXN1-215ENST00000533476 TMEM65Q6PI78 240 aa16.91■□□□□ 0.3
UBXN1-215ENST00000533476 GPR137CQ8N3F9 429 aa16.91■□□□□ 0.3
UBXN1-215ENST00000533476 PCNPQ8WW12 178 aaKnown RBP16.91■□□□□ 0.3
UBXN1-215ENST00000533476 ZNF837Q96EG3 531 aaPredicted RBP16.91■□□□□ 0.3
UBXN1-215ENST00000533476 URM1Q9BTM9 101 aaKnown RBP16.91■□□□□ 0.3
UBXN1-215ENST00000533476 CHST5Q9GZS9 411 aa16.91■□□□□ 0.3
UBXN1-215ENST00000533476 BANF2Q9H503 90 aa16.91■□□□□ 0.3
UBXN1-215ENST00000533476 MFSD2BA6NFX1 497 aa16.9■□□□□ 0.3
UBXN1-215ENST00000533476 SOCS1O15524 211 aa16.9■□□□□ 0.3
UBXN1-215ENST00000533476 CRTAPO75718 401 aaPredicted RBP16.9■□□□□ 0.3
UBXN1-215ENST00000533476 NMBP08949 121 aa16.9■□□□□ 0.3
UBXN1-215ENST00000533476 CYB561P49447 251 aa16.9■□□□□ 0.3
UBXN1-215ENST00000533476 GK2Q14410 553 aaPredicted RBP16.9■□□□□ 0.3
UBXN1-215ENST00000533476 RAB35Q15286 201 aa16.9■□□□□ 0.3
UBXN1-215ENST00000533476 CRIP3Q6Q6R5 217 aa16.9■□□□□ 0.3
UBXN1-215ENST00000533476 GSG1LQ6UXU4 331 aa16.9■□□□□ 0.3
UBXN1-215ENST00000533476 STEAP2Q8NFT2 490 aa16.9■□□□□ 0.3
UBXN1-215ENST00000533476 OR6K3Q8NGY3 331 aa16.9■□□□□ 0.3
UBXN1-215ENST00000533476 OR2V1Q8NHB1 315 aa16.9■□□□□ 0.3
UBXN1-215ENST00000533476 ARL6Q9H0F7 186 aa16.9■□□□□ 0.3
UBXN1-215ENST00000533476 CST11Q9H112 138 aa16.9■□□□□ 0.3
UBXN1-215ENST00000533476 DEPPQ9NTK1 212 aa16.9■□□□□ 0.3
UBXN1-215ENST00000533476 NCKAP5O14513 1909 aa16.9■□□□□ 0.3
UBXN1-215ENST00000533476 FXYD6-FXYD2A0A087WZ82 144 aa16.9■□□□□ 0.3
UBXN1-215ENST00000533476 MTRF1O75570 445 aaKnown RBP16.9■□□□□ 0.3
UBXN1-215ENST00000533476 CD8AP01732 235 aa16.9■□□□□ 0.3
UBXN1-215ENST00000533476 HLA-AP01891 365 aaKnown RBP16.9■□□□□ 0.3
UBXN1-215ENST00000533476 CST2P09228 141 aa16.9■□□□□ 0.3
UBXN1-215ENST00000533476 JMJD7P0C870 316 aa16.9■□□□□ 0.3
UBXN1-215ENST00000533476 NAT2P11245 290 aa16.9■□□□□ 0.3
UBXN1-215ENST00000533476 ZP3P21754 424 aa16.9■□□□□ 0.3
UBXN1-215ENST00000533476 CRYGSP22914 178 aa16.9■□□□□ 0.3
UBXN1-215ENST00000533476 ZBTB25P24278 435 aa16.9■□□□□ 0.3
UBXN1-215ENST00000533476 AGTR1P30556 359 aa16.9■□□□□ 0.3
UBXN1-215ENST00000533476 FAHD2BQ6P2I3 314 aaPredicted RBP16.9■□□□□ 0.3
UBXN1-215ENST00000533476 C17orf107Q6ZR85 190 aa16.9■□□□□ 0.3
UBXN1-215ENST00000533476 FAM89BQ8N5H3 189 aa16.9■□□□□ 0.3
UBXN1-215ENST00000533476 OR52H1Q8NGJ2 320 aa16.9■□□□□ 0.3
UBXN1-215ENST00000533476 OR5M8Q8NGP6 311 aa16.9■□□□□ 0.3
UBXN1-215ENST00000533476 CPT1CQ8TCG5 803 aa16.9■□□□□ 0.3
UBXN1-215ENST00000533476 PSMF1Q92530 271 aa16.9■□□□□ 0.3
UBXN1-215ENST00000533476 FAHD2AQ96GK7 314 aa16.9■□□□□ 0.3
UBXN1-215ENST00000533476 FXYD6Q9H0Q3 95 aa16.9■□□□□ 0.3
UBXN1-215ENST00000533476 OR10A2Q9H208 303 aa16.9■□□□□ 0.3
UBXN1-215ENST00000533476 SDHAF2Q9NX18 166 aa16.9■□□□□ 0.3
UBXN1-215ENST00000533476 CCDC187A0A096LP49 1063 aa16.89■□□□□ 0.29
UBXN1-215ENST00000533476 A0A1W2PP11 408 aa16.89■□□□□ 0.29
UBXN1-215ENST00000533476 MFNGO00587 321 aa16.89■□□□□ 0.29
UBXN1-215ENST00000533476 CXCL13O43927 109 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms