RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, human

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXF1-215	ENST00000533440	B9D1	Q9UPM9	204 aa		6.28	□□□□□ -1.4
NXF1-215	ENST00000533440	SIGLEC7	Q9Y286	467 aa		6.28	□□□□□ -1.4
NXF1-215	ENST00000533440	PCDHGB5	Q9Y5G0	923 aa		6.28	□□□□□ -1.4
NXF1-215	ENST00000533440	TSSC4	Q9Y5U2	329 aa	Predicted RBP	6.28	□□□□□ -1.4
NXF1-215	ENST00000533440	TRBV23-1	A0A0A0MS06	115 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440		H0YAE9	185 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440		J3KTA2	159 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	SOCS2	O14508	198 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	FFAR1	O14842	300 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	SIGLEC5	O15389	551 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	SYNGR1	O43759	233 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	TIPRL	O75663	272 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	ZFPL1	O95159	310 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	NDUFB2	O95178	105 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	IFNA14	P01570	189 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	ACAA1	P09110	424 aa	Predicted RBP	6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	DDOST	P39656	456 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	VDAC2	P45880	294 aa	Predicted RBP	6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	CENPA	P49450	140 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	RAB13	P51153	203 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	FXYD6P3	P58550	94 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	BLCAP	P62952	87 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	TMEM95	Q3KNT9	176 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	SLC36A3	Q495N2	470 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	CYBRD1	Q53TN4	286 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	NANOGP8	Q6NSW7	305 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	TBPL2	Q6SJ96	375 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	DRAM2	Q6UX65	266 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	MKX	Q8IYA7	352 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	OR6V1	Q8N148	313 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	DYNAP	Q8N1N2	210 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	C11orf42	Q8N5U0	333 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	LINC00482	Q8N8I6	264 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	OR8S1	Q8NH09	359 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	OR5K1	Q8NHB7	308 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	MUC7	Q8TAX7	377 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	TSPEAR	Q8WU66	669 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	DPF1	Q92782	380 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	SPTSSA	Q969W0	71 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	MAP6	Q96JE9	813 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	C7orf26	Q96N11	449 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	RAB3IP	Q96QF0	476 aa	Predicted RBP	6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	NDEL1	Q9GZM8	345 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	WDR13	Q9H1Z4	485 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	RABEP2	Q9H5N1	569 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	OPA3	Q9H6K4	179 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	HEXA-AS1	Q9H8Q6	139 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	SNTG1	Q9NSN8	517 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	RHCG	Q9UBD6	479 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	ZNF391	Q9UJN7	358 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	PITPNC1	Q9UKF7	332 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	IER3IP1	Q9Y5U9	82 aa		6.27	□□□□□ -1.41
NXF1-215	ENST00000533440	LCE6A	A0A183	80 aa		6.26	□□□□□ -1.41
NXF1-215	ENST00000533440	TCRBV4S1A1T	A0A5B7	111 aa		6.26	□□□□□ -1.41
NXF1-215	ENST00000533440	ANKRD30BL	A7E2S9	258 aa		6.26	□□□□□ -1.41
NXF1-215	ENST00000533440	CDIPT	O14735	213 aa		6.26	□□□□□ -1.41
NXF1-215	ENST00000533440	ANGPT2	O15123	496 aa		6.26	□□□□□ -1.41
NXF1-215	ENST00000533440	GLCE	O94923	617 aa		6.26	□□□□□ -1.41
NXF1-215	ENST00000533440	TFF1	P04155	84 aa		6.26	□□□□□ -1.41
NXF1-215	ENST00000533440	ALDOB	P05062	364 aa		6.26	□□□□□ -1.41
NXF1-215	ENST00000533440	NDUFB7	P17568	137 aa		6.26	□□□□□ -1.41
NXF1-215	ENST00000533440	LMO1	P25800	156 aa		6.26	□□□□□ -1.41
NXF1-215	ENST00000533440	POU1F1	P28069	291 aa		6.26	□□□□□ -1.41
NXF1-215	ENST00000533440	KDELR2	P33947	212 aa		6.26	□□□□□ -1.41
NXF1-215	ENST00000533440	YAP1	P46937	504 aa	Known RBP	6.26	□□□□□ -1.41
NXF1-215	ENST00000533440	SELENOW	P63302	87 aa		6.26	□□□□□ -1.41
NXF1-215	ENST00000533440	SPIB	Q01892	262 aa		6.26	□□□□□ -1.41
NXF1-215	ENST00000533440	WDR93	Q6P2C0	686 aa		6.26	□□□□□ -1.41
NXF1-215	ENST00000533440	ZNF730	Q6ZMV8	503 aa		6.26	□□□□□ -1.41
NXF1-215	ENST00000533440	DPY19L2P2	Q6ZN68	376 aa		6.26	□□□□□ -1.41
NXF1-215	ENST00000533440	CCDC121	Q6ZUS5	278 aa		6.26	□□□□□ -1.41
NXF1-215	ENST00000533440	LHFPL4	Q7Z7J7	247 aa		6.26	□□□□□ -1.41
NXF1-215	ENST00000533440	ZBTB46	Q86UZ6	589 aa		6.26	□□□□□ -1.41
NXF1-215	ENST00000533440	TMEM219	Q86XT9	240 aa		6.26	□□□□□ -1.41
NXF1-215	ENST00000533440	LNX2	Q8N448	690 aa		6.26	□□□□□ -1.41
NXF1-215	ENST00000533440	CYB561A3	Q8NBI2	242 aa		6.26	□□□□□ -1.41
NXF1-215	ENST00000533440	SDR9C7	Q8NEX9	313 aa		6.26	□□□□□ -1.41
NXF1-215	ENST00000533440	OR10Z1	Q8NGY1	313 aa		6.26	□□□□□ -1.41
NXF1-215	ENST00000533440	OR2AJ1	Q8NGZ0	328 aa		6.26	□□□□□ -1.41
NXF1-215	ENST00000533440	SPSB4	Q96A44	273 aa		6.26	□□□□□ -1.41
NXF1-215	ENST00000533440	FNDC11	Q9BVV2	318 aa		6.26	□□□□□ -1.41
NXF1-215	ENST00000533440	CHID1	Q9BWS9	393 aa		6.26	□□□□□ -1.41
NXF1-215	ENST00000533440	SRA1	Q9HD15	236 aa	Known RBP	6.26	□□□□□ -1.41
NXF1-215	ENST00000533440	TMEM5	Q9Y2B1	443 aa		6.26	□□□□□ -1.41
NXF1-215	ENST00000533440	LSM4	Q9Y4Z0	139 aa	Known RBP	6.26	□□□□□ -1.41
NXF1-215	ENST00000533440	SNX13	Q9Y5W8	968 aa		6.26	□□□□□ -1.41
NXF1-215	ENST00000533440	F2RL2	O00254	374 aa		6.25	□□□□□ -1.41
NXF1-215	ENST00000533440	XRCC2	O43543	280 aa		6.25	□□□□□ -1.41
NXF1-215	ENST00000533440	RHBDL1	O75783	438 aa		6.25	□□□□□ -1.41
NXF1-215	ENST00000533440	CLIC3	O95833	236 aa		6.25	□□□□□ -1.41
NXF1-215	ENST00000533440	CHRM2	P08172	466 aa		6.25	□□□□□ -1.41
NXF1-215	ENST00000533440	NOS3	P29474	1203 aa		6.25	□□□□□ -1.41
NXF1-215	ENST00000533440	DYNLT3	P51808	116 aa		6.25	□□□□□ -1.41
NXF1-215	ENST00000533440	RPS6KA3	P51812	740 aa		6.25	□□□□□ -1.41
NXF1-215	ENST00000533440	LGALS4	P56470	323 aa		6.25	□□□□□ -1.41
NXF1-215	ENST00000533440	FAM3A	P98173	230 aa		6.25	□□□□□ -1.41
NXF1-215	ENST00000533440	LRRC23	Q53EV4	343 aa	Predicted RBP	6.25	□□□□□ -1.41
NXF1-215	ENST00000533440	ARSJ	Q5FYB0	599 aa	Predicted RBP	6.25	□□□□□ -1.41
NXF1-215	ENST00000533440	ERICH5	Q6P6B1	374 aa		6.25	□□□□□ -1.41
NXF1-215	ENST00000533440	ETV3L	Q6ZN32	361 aa		6.25	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms