RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 ROM1Q03395 351 aa25.27■■□□□ 1.64
SSSCA1-207ENST00000533115 PAX8Q06710 450 aa25.27■■□□□ 1.64
SSSCA1-207ENST00000533115 USP43Q70EL4 1123 aa25.27■■□□□ 1.64
SSSCA1-207ENST00000533115 GCSAMQ8N6F7 178 aa25.27■■□□□ 1.64
SSSCA1-207ENST00000533115 SEMA6DQ8NFY4 1073 aa25.27■■□□□ 1.64
SSSCA1-207ENST00000533115 RAB40AQ8WXH6 277 aa25.27■■□□□ 1.64
SSSCA1-207ENST00000533115 TRIM36Q9NQ86 728 aa25.27■■□□□ 1.64
SSSCA1-207ENST00000533115 FAM206AQ9NX38 181 aa25.27■■□□□ 1.64
SSSCA1-207ENST00000533115 DOCK11Q5JSL3 2073 aa25.26■■□□□ 1.63
SSSCA1-207ENST00000533115 hCG_1807616A0A1W2PRN6 198 aa25.26■■□□□ 1.63
SSSCA1-207ENST00000533115 PRR32B1ATL7 298 aa25.26■■□□□ 1.63
SSSCA1-207ENST00000533115 ZNF254O75437 659 aa25.26■■□□□ 1.63
SSSCA1-207ENST00000533115 LHBP01229 141 aa25.26■■□□□ 1.63
SSSCA1-207ENST00000533115 ACKR3P25106 362 aa25.26■■□□□ 1.63
SSSCA1-207ENST00000533115 DCTDP32321 178 aa25.26■■□□□ 1.63
SSSCA1-207ENST00000533115 ARMCX4Q5H9R4 360 aa25.26■■□□□ 1.63
SSSCA1-207ENST00000533115 BTNL3Q6UXE8 466 aa25.26■■□□□ 1.63
SSSCA1-207ENST00000533115 ZNF841Q6ZN19 808 aa25.26■■□□□ 1.63
SSSCA1-207ENST00000533115 C11orf53Q8IXP5 236 aa25.26■■□□□ 1.63
SSSCA1-207ENST00000533115 ZNF679Q8IYX0 411 aa25.26■■□□□ 1.63
SSSCA1-207ENST00000533115 OR1M1Q8NGA1 313 aa25.26■■□□□ 1.63
SSSCA1-207ENST00000533115 PYDC1Q8WXC3 89 aa25.26■■□□□ 1.63
SSSCA1-207ENST00000533115 OR8B4Q96RC9 309 aa25.26■■□□□ 1.63
SSSCA1-207ENST00000533115 IL4I1Q96RQ9 567 aa25.26■■□□□ 1.63
SSSCA1-207ENST00000533115 MPC1Q9Y5U8 109 aa25.26■■□□□ 1.63
SSSCA1-207ENST00000533115 TRAV38-1A0A0B4J264 116 aa25.25■■□□□ 1.63
SSSCA1-207ENST00000533115 IGHV2-70DA0A0C4DH43 119 aa25.25■■□□□ 1.63
SSSCA1-207ENST00000533115 TMEM269A0A1B0GVZ9 245 aa25.25■■□□□ 1.63
SSSCA1-207ENST00000533115 OOEPA6NGQ2 149 aa25.25■■□□□ 1.63
SSSCA1-207ENST00000533115 PHYHO14832 338 aa25.25■■□□□ 1.63
SSSCA1-207ENST00000533115 ACTR3P61158 418 aa25.25■■□□□ 1.63
SSSCA1-207ENST00000533115 IL5RAQ01344 420 aa25.25■■□□□ 1.63
SSSCA1-207ENST00000533115 WDR25Q64LD2 544 aaPredicted RBP25.25■■□□□ 1.63
SSSCA1-207ENST00000533115 GID4Q8IVV7 300 aa25.25■■□□□ 1.63
SSSCA1-207ENST00000533115 BPIFB2Q8N4F0 458 aa25.25■■□□□ 1.63
SSSCA1-207ENST00000533115 DACT3Q96B18 629 aaPredicted RBP25.25■■□□□ 1.63
SSSCA1-207ENST00000533115 ITPKCQ96DU7 683 aa25.25■■□□□ 1.63
SSSCA1-207ENST00000533115 SLC6A7Q99884 636 aa25.25■■□□□ 1.63
SSSCA1-207ENST00000533115 MICU1Q9BPX6 476 aa25.25■■□□□ 1.63
SSSCA1-207ENST00000533115 SUCNR1Q9BXA5 334 aa25.25■■□□□ 1.63
SSSCA1-207ENST00000533115 RNPEPL1Q9HAU8 725 aa25.25■■□□□ 1.63
SSSCA1-207ENST00000533115 SAC3D1A6NKF1 404 aa25.24■■□□□ 1.63
SSSCA1-207ENST00000533115 ANXA2P2A6NMY6 339 aa25.24■■□□□ 1.63
SSSCA1-207ENST00000533115 CST4P01036 141 aa25.24■■□□□ 1.63
SSSCA1-207ENST00000533115 POLR2IP36954 125 aaKnown RBP25.24■■□□□ 1.63
SSSCA1-207ENST00000533115 HILS1P60008 231 aa25.24■■□□□ 1.63
SSSCA1-207ENST00000533115 GALNT4Q8N4A0 578 aa25.24■■□□□ 1.63
SSSCA1-207ENST00000533115 MNTQ99583 582 aa25.24■■□□□ 1.63
SSSCA1-207ENST00000533115 OSBPL10Q9BXB5 764 aa25.24■■□□□ 1.63
SSSCA1-207ENST00000533115 GABARAPL3Q9BY60 117 aa25.24■■□□□ 1.63
SSSCA1-207ENST00000533115 TTTY10Q9BZA0 68 aa25.24■■□□□ 1.63
SSSCA1-207ENST00000533115 ADGRL4Q9HBW9 690 aa25.24■■□□□ 1.63
SSSCA1-207ENST00000533115 ABCB9Q9NP78 766 aa25.24■■□□□ 1.63
SSSCA1-207ENST00000533115 HAO2Q9NYQ3 351 aa25.24■■□□□ 1.63
SSSCA1-207ENST00000533115 IKZF2Q9UKS7 526 aa25.24■■□□□ 1.63
SSSCA1-207ENST00000533115 A0A0U1RQV5 110 aa25.23■■□□□ 1.63
SSSCA1-207ENST00000533115 ZNF850A8MQ14 1090 aa25.23■■□□□ 1.63
SSSCA1-207ENST00000533115 TNFRSF13BO14836 293 aaPredicted RBP25.23■■□□□ 1.63
SSSCA1-207ENST00000533115 NDUFA2O43678 99 aa25.23■■□□□ 1.63
SSSCA1-207ENST00000533115 FPR2P25090 351 aa25.23■■□□□ 1.63
SSSCA1-207ENST00000533115 NPY4RP50391 375 aa25.23■■□□□ 1.63
SSSCA1-207ENST00000533115 RIDAP52758 137 aaKnown RBP25.23■■□□□ 1.63
SSSCA1-207ENST00000533115 CSNK2BP67870 215 aa25.23■■□□□ 1.63
SSSCA1-207ENST00000533115 PRDX4Q13162 271 aa25.23■■□□□ 1.63
SSSCA1-207ENST00000533115 SLC35F2Q8IXU6 374 aa25.23■■□□□ 1.63
SSSCA1-207ENST00000533115 ZFAND2BQ8WV99 257 aa25.23■■□□□ 1.63
SSSCA1-207ENST00000533115 RBM4BQ9BQ04 359 aaKnown RBP25.23■■□□□ 1.63
SSSCA1-207ENST00000533115 RTL8AQ9BWD3 113 aa25.23■■□□□ 1.63
SSSCA1-207ENST00000533115 PBOV1Q9GZY1 135 aa25.23■■□□□ 1.63
SSSCA1-207ENST00000533115 RIBC2Q9H4K1 309 aa25.23■■□□□ 1.63
SSSCA1-207ENST00000533115 CTSZQ9UBR2 303 aa25.23■■□□□ 1.63
SSSCA1-207ENST00000533115 NUP50Q9UKX7 468 aa25.23■■□□□ 1.63
SSSCA1-207ENST00000533115 KIR2DS1A0A191URI9 304 aa25.22■■□□□ 1.63
SSSCA1-207ENST00000533115 EGR1P18146 543 aa25.22■■□□□ 1.63
SSSCA1-207ENST00000533115 CXCR4P61073 352 aa25.22■■□□□ 1.63
SSSCA1-207ENST00000533115 KPNB1Q14974 876 aaKnown RBP25.22■■□□□ 1.63
SSSCA1-207ENST00000533115 ZNF829Q3KNS6 432 aaPredicted RBP25.22■■□□□ 1.63
SSSCA1-207ENST00000533115 KLF17Q5JT82 389 aaPredicted RBP25.22■■□□□ 1.63
SSSCA1-207ENST00000533115 TEX36Q5VZQ5 186 aa25.22■■□□□ 1.63
SSSCA1-207ENST00000533115 ZNF322Q6U7Q0 402 aaPredicted RBP25.22■■□□□ 1.63
SSSCA1-207ENST00000533115 WDR82Q6UXN9 313 aa25.22■■□□□ 1.63
SSSCA1-207ENST00000533115 LRRC29Q8WV35 223 aa25.22■■□□□ 1.63
SSSCA1-207ENST00000533115 C22orf15Q8WYQ4 148 aa25.22■■□□□ 1.63
SSSCA1-207ENST00000533115 PIGCQ92535 297 aa25.22■■□□□ 1.63
SSSCA1-207ENST00000533115 JMJD8Q96S16 334 aa25.22■■□□□ 1.63
SSSCA1-207ENST00000533115 NUDT16L1Q9BRJ7 211 aaKnown RBP25.22■■□□□ 1.63
SSSCA1-207ENST00000533115 TLNRD1Q9H1K6 362 aa25.22■■□□□ 1.63
SSSCA1-207ENST00000533115 ERVK-18Q9QC07 812 aa25.22■■□□□ 1.63
SSSCA1-207ENST00000533115 ADAM20O43506 726 aa25.21■■□□□ 1.63
SSSCA1-207ENST00000533115 PPIAL4GP0DN37 164 aa25.21■■□□□ 1.63
SSSCA1-207ENST00000533115 FAM90A1Q86YD7 464 aa25.21■■□□□ 1.63
SSSCA1-207ENST00000533115 FAM81AQ8TBF8 368 aa25.21■■□□□ 1.63
SSSCA1-207ENST00000533115 OR5P3Q8WZ94 311 aa25.21■■□□□ 1.63
SSSCA1-207ENST00000533115 TECTBQ96PL2 329 aa25.21■■□□□ 1.63
SSSCA1-207ENST00000533115 PKP2Q99959 881 aa25.21■■□□□ 1.63
SSSCA1-207ENST00000533115 CLN6Q9NWW5 311 aa25.21■■□□□ 1.63
SSSCA1-207ENST00000533115 CDIPTO14735 213 aa25.2■■□□□ 1.62
SSSCA1-207ENST00000533115 GYPAP02724 150 aa25.2■■□□□ 1.62
SSSCA1-207ENST00000533115 MAP2K3P46734 347 aa25.2■■□□□ 1.62
SSSCA1-207ENST00000533115 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms