RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 B4GALT5O43286 388 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 SERPINB7O75635 380 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 SLC22A5O76082 557 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 GLSO94925 669 aaPredicted RBP1.85□□□□□ -2.11
CD44-234ENST00000531873 TRBV12-3P01733 135 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 RHOCP08134 193 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 RSPH10BP0C881 870 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 CCNOP22674 350 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 ARL2P36404 184 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 GALR1P47211 349 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 MNAT1P51948 309 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 KRTAP10-8P60410 259 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 DYNC1I2Q13409 638 aaKnown RBP1.85□□□□□ -2.11
CD44-234ENST00000531873 MAD2L1BPQ15013 274 aaPredicted RBP1.85□□□□□ -2.11
CD44-234ENST00000531873 TNXAQ16473 311 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 TAL2Q16559 108 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 SNRNP35Q16560 246 aaKnown RBP1.85□□□□□ -2.11
CD44-234ENST00000531873 TMEM236Q5W0B7 351 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 SAXO2Q658L1 398 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 DUPD1Q68J44 220 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 DEGS2Q6QHC5 323 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 RTL4Q6ZR62 310 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 COPS6Q7L5N1 327 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 SH2D6Q7Z4S9 175 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 SLC34A3Q8N130 599 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 Q8N9L7 120 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 OR4K5Q8NGD3 323 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 COQ8AQ8NI60 647 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 LRRC20Q8TCA0 184 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 LGALS14Q8TCE9 139 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 RXFP4Q8TDU9 374 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 FLYWCH2Q96CP2 140 aaKnown RBP1.85□□□□□ -2.11
CD44-234ENST00000531873 C18orf15Q96N68 181 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 ZNF285Q96NJ3 590 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 RDH12Q96NR8 316 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 C20orf144Q9BQM9 153 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 UTP23Q9BRU9 249 aaKnown RBP1.85□□□□□ -2.11
CD44-234ENST00000531873 GGTLC1Q9BX51 225 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 TOLLIPQ9H0E2 274 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 RMND1Q9NWS8 449 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 CFAP45Q9UL16 551 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 SIGLEC7Q9Y286 467 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 AQRO60306 1485 aaKnown RBP eCLIP1.85□□□□□ -2.11
CD44-234ENST00000531873 ARAP1Q96P48 1450 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 MIA3Q5JRA6 1907 aa1.85□□□□□ -2.11
CD44-234ENST00000531873 TUBGCP6Q96RT7 1819 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 TRAV8-7A0A075B6U6 113 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 IGHV3-72A0A0B4J1Y9 119 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 IGHV2OR16-5A0A0B4J2B6 119 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 A0A1W2PP18 115 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 ANKRD20A5PA0PJZ0 165 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 ZNF705GA8MUZ8 300 aaPredicted RBP1.84□□□□□ -2.11
CD44-234ENST00000531873 NDUFC2-KCTD14E9PQ53 114 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 H0YJW9 148 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 TNFRSF11BO00300 401 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 BPY2O14599 106 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 YKT6O15498 198 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 SNAI2O43623 268 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 KRTAP5-8O75690 187 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 TTC4O95801 387 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 NPPAP01160 153 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 APOA1P02647 267 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 APCSP02743 223 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 CXCR1P25024 350 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 TAS2R60P59551 318 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 TNNC1P63316 161 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 SLC35A1P78382 337 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 IFFO1Q0D2I5 559 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 ST3GAL4Q11206 333 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 PNOCQ13519 176 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 GPR176Q14439 515 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 PSG3Q16557 428 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 PRSS8Q16651 343 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 KRTAP13-3Q3SY46 172 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 C6orf99Q4VX62 202 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 MPV17L2Q567V2 206 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 RNASE13Q5GAN3 156 aaKnown RBP1.84□□□□□ -2.11
CD44-234ENST00000531873 SNX20Q7Z614 316 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 CALHM1Q8IU99 346 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 ENTHD1Q8IYW4 607 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 TCAIMQ8N3R3 496 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 ZNF645Q8N7E2 425 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 OR4D6Q8NGJ1 314 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 OR6N2Q8NGY6 317 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 CIRBP-AS1Q8TBR5 109 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 GHSRQ92847 366 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 SMARCD1Q96GM5 515 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 CYYR1Q96J86 154 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 RBBP8Q99708 897 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 SYT4Q9H2B2 425 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 HMG20AQ9NP66 347 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 C8orf17Q9NRJ1 99 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 ZNF355PQ9NSJ1 428 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 TMEM100Q9NV29 134 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 ZNRD1Q9P1U0 126 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 CLEC2DQ9UHP7 191 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 POFUT2Q9Y2G5 429 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 HYOU1Q9Y4L1 999 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 HES2Q9Y543 173 aa1.84□□□□□ -2.11
CD44-234ENST00000531873 IGSF9BQ9UPX0 1349 aa1.84□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms