RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 SLC1A7O00341 560 aa14.34□□□□□ -0.11
PKP3-208ENST00000531857 P2RY10O00398 339 aa14.34□□□□□ -0.11
PKP3-208ENST00000531857 DCTN6O00399 190 aa14.34□□□□□ -0.11
PKP3-208ENST00000531857 OR10H3O60404 316 aa14.34□□□□□ -0.11
PKP3-208ENST00000531857 GPR137BO60478 399 aa14.34□□□□□ -0.11
PKP3-208ENST00000531857 PTP4A3O75365 173 aa14.34□□□□□ -0.11
PKP3-208ENST00000531857 CLIC3O95833 236 aa14.34□□□□□ -0.11
PKP3-208ENST00000531857 TSPAN15O95858 294 aa14.34□□□□□ -0.11
PKP3-208ENST00000531857 IGHV4-59P01825 116 aa14.34□□□□□ -0.11
PKP3-208ENST00000531857 SDHAP31040 664 aa14.34□□□□□ -0.11
PKP3-208ENST00000531857 CRISP1P54107 249 aa14.34□□□□□ -0.11
PKP3-208ENST00000531857 PROK1P58294 105 aa14.34□□□□□ -0.11
PKP3-208ENST00000531857 PPP1R8Q12972 351 aaKnown RBP14.34□□□□□ -0.11
PKP3-208ENST00000531857 GK2Q14410 553 aaPredicted RBP14.34□□□□□ -0.11
PKP3-208ENST00000531857 PDCD1Q15116 288 aa14.34□□□□□ -0.11
PKP3-208ENST00000531857 TAF9Q16594 264 aa14.34□□□□□ -0.11
PKP3-208ENST00000531857 FGD3Q5JSP0 725 aa14.34□□□□□ -0.11
PKP3-208ENST00000531857 SFRP4Q6FHJ7 346 aaPredicted RBP14.34□□□□□ -0.11
PKP3-208ENST00000531857 NAA40Q86UY6 237 aa14.34□□□□□ -0.11
PKP3-208ENST00000531857 SATL1Q86VE3 508 aa14.34□□□□□ -0.11
PKP3-208ENST00000531857 GJC3Q8NFK1 279 aa14.34□□□□□ -0.11
PKP3-208ENST00000531857 OR52J3Q8NH60 311 aa14.34□□□□□ -0.11
PKP3-208ENST00000531857 SSMEM1Q8WWF3 244 aa14.34□□□□□ -0.11
PKP3-208ENST00000531857 DYRK2Q92630 601 aa14.34□□□□□ -0.11
PKP3-208ENST00000531857 FCGR1BQ92637 280 aa14.34□□□□□ -0.11
PKP3-208ENST00000531857 MYDGFQ969H8 173 aa14.34□□□□□ -0.11
PKP3-208ENST00000531857 UBE2FQ969M7 185 aa14.34□□□□□ -0.11
PKP3-208ENST00000531857 FAM46AQ96IP4 442 aaKnown RBP14.34□□□□□ -0.11
PKP3-208ENST00000531857 TSSK2Q96PF2 358 aa14.34□□□□□ -0.11
PKP3-208ENST00000531857 BCL7BQ9BQE9 202 aa14.34□□□□□ -0.11
PKP3-208ENST00000531857 FUZQ9BT04 418 aa14.34□□□□□ -0.11
PKP3-208ENST00000531857 HCAR1Q9BXC0 346 aa14.34□□□□□ -0.11
PKP3-208ENST00000531857 HDHD2Q9H0R4 259 aa14.34□□□□□ -0.11
PKP3-208ENST00000531857 DUSP21Q9H596 190 aa14.34□□□□□ -0.11
PKP3-208ENST00000531857 NRIP3Q9NQ35 241 aa14.34□□□□□ -0.11
PKP3-208ENST00000531857 ACOXLQ9NUZ1 547 aa14.34□□□□□ -0.11
PKP3-208ENST00000531857 IMPAD1Q9NX62 359 aa14.34□□□□□ -0.11
PKP3-208ENST00000531857 NOL3O60936 208 aaKnown RBP14.33□□□□□ -0.12
PKP3-208ENST00000531857 MITFO75030 526 aaPredicted RBP14.33□□□□□ -0.12
PKP3-208ENST00000531857 CLPXO76031 633 aa14.33□□□□□ -0.12
PKP3-208ENST00000531857 NDUFB2O95178 105 aa14.33□□□□□ -0.12
PKP3-208ENST00000531857 CD200P41217 278 aa14.33□□□□□ -0.12
PKP3-208ENST00000531857 CDKN2AP42771 156 aaKnown RBP14.33□□□□□ -0.12
PKP3-208ENST00000531857 CENPAP49450 140 aa14.33□□□□□ -0.12
PKP3-208ENST00000531857 FXYD6P3P58550 94 aa14.33□□□□□ -0.12
PKP3-208ENST00000531857 KRTAP27-1Q3LI81 207 aa14.33□□□□□ -0.12
PKP3-208ENST00000531857 CELF2-AS1Q8N7Q2 184 aa14.33□□□□□ -0.12
PKP3-208ENST00000531857 BOLLQ8N9W6 283 aaKnown RBP14.33□□□□□ -0.12
PKP3-208ENST00000531857 OR11L1Q8NGX0 322 aa14.33□□□□□ -0.12
PKP3-208ENST00000531857 RHOXF1Q8NHV9 184 aa14.33□□□□□ -0.12
PKP3-208ENST00000531857 TBC1D15Q8TC07 691 aa14.33□□□□□ -0.12
PKP3-208ENST00000531857 GNPDA2Q8TDQ7 276 aa14.33□□□□□ -0.12
PKP3-208ENST00000531857 GATAD2BQ8WXI9 593 aa14.33□□□□□ -0.12
PKP3-208ENST00000531857 LHX4Q969G2 390 aa14.33□□□□□ -0.12
PKP3-208ENST00000531857 WDFY2Q96P53 400 aa14.33□□□□□ -0.12
PKP3-208ENST00000531857 SIRPDQ9H106 197 aa14.33□□□□□ -0.12
PKP3-208ENST00000531857 SMURF1Q9HCE7 757 aa14.33□□□□□ -0.12
PKP3-208ENST00000531857 PTTG2Q9NZH5 202 aa14.33□□□□□ -0.12
PKP3-208ENST00000531857 RSL24D1Q9UHA3 163 aaKnown RBP14.33□□□□□ -0.12
PKP3-208ENST00000531857 SIGLEC7Q9Y286 467 aa14.33□□□□□ -0.12
PKP3-208ENST00000531857 IER3IP1Q9Y5U9 82 aa14.33□□□□□ -0.12
PKP3-208ENST00000531857 IGHV1-69DA0A0B4J2H0 117 aa14.32□□□□□ -0.12
PKP3-208ENST00000531857 A0A0U1RQK1 487 aa14.32□□□□□ -0.12
PKP3-208ENST00000531857 SNTNA6NMZ2 147 aa14.32□□□□□ -0.12
PKP3-208ENST00000531857 ZAR1LA6NP61 321 aa14.32□□□□□ -0.12
PKP3-208ENST00000531857 FCN3O75636 299 aa14.32□□□□□ -0.12
PKP3-208ENST00000531857 IGHV1-69P01742 117 aa14.32□□□□□ -0.12
PKP3-208ENST00000531857 ACSM4P0C7M7 580 aa14.32□□□□□ -0.12
PKP3-208ENST00000531857 IER3P46695 156 aa14.32□□□□□ -0.12
PKP3-208ENST00000531857 NPY4RP50391 375 aa14.32□□□□□ -0.12
PKP3-208ENST00000531857 RPL15P61313 204 aaKnown RBP14.32□□□□□ -0.12
PKP3-208ENST00000531857 CD276Q5ZPR3 534 aa14.32□□□□□ -0.12
PKP3-208ENST00000531857 GPR139Q6DWJ6 353 aa14.32□□□□□ -0.12
PKP3-208ENST00000531857 CFAP77Q6ZQR2 320 aa14.32□□□□□ -0.12
PKP3-208ENST00000531857 KCTD8Q6ZWB6 473 aa14.32□□□□□ -0.12
PKP3-208ENST00000531857 SLC7A13Q8TCU3 470 aa14.32□□□□□ -0.12
PKP3-208ENST00000531857 ERGIC1Q969X5 290 aa14.32□□□□□ -0.12
PKP3-208ENST00000531857 GPX7Q96SL4 187 aaPredicted RBP14.32□□□□□ -0.12
PKP3-208ENST00000531857 ERVK-18Q9QC07 812 aa14.32□□□□□ -0.12
PKP3-208ENST00000531857 TET2Q6N021 2002 aaPredicted RBP14.32□□□□□ -0.12
PKP3-208ENST00000531857 SLC22A31A6NKX4 558 aa14.31□□□□□ -0.12
PKP3-208ENST00000531857 C3orf80F5H4A9 247 aa14.31□□□□□ -0.12
PKP3-208ENST00000531857 ADAM20O43506 726 aa14.31□□□□□ -0.12
PKP3-208ENST00000531857 GASTP01350 101 aa14.31□□□□□ -0.12
PKP3-208ENST00000531857 LIPFP07098 398 aa14.31□□□□□ -0.12
PKP3-208ENST00000531857 SNRPGP62308 76 aaKnown RBP14.31□□□□□ -0.12
PKP3-208ENST00000531857 CNPY1Q3B7I2 92 aa14.31□□□□□ -0.12
PKP3-208ENST00000531857 METTL11BQ5VVY1 283 aa14.31□□□□□ -0.12
PKP3-208ENST00000531857 MEDAGQ5VYS4 303 aa14.31□□□□□ -0.12
PKP3-208ENST00000531857 PRSS48Q7RTY5 328 aa14.31□□□□□ -0.12
PKP3-208ENST00000531857 ADCK1Q86TW2 530 aa14.31□□□□□ -0.12
PKP3-208ENST00000531857 LINC00346Q8IVM7 164 aa14.31□□□□□ -0.12
PKP3-208ENST00000531857 PDZD9Q8IXQ8 264 aa14.31□□□□□ -0.12
PKP3-208ENST00000531857 NDEL1Q9GZM8 345 aa14.31□□□□□ -0.12
PKP3-208ENST00000531857 RBM38Q9H0Z9 239 aaKnown RBP14.31□□□□□ -0.12
PKP3-208ENST00000531857 TCF7L1Q9HCS4 588 aa14.31□□□□□ -0.12
PKP3-208ENST00000531857 CLN6Q9NWW5 311 aa14.31□□□□□ -0.12
PKP3-208ENST00000531857 CNOT2Q9NZN8 540 aaKnown RBP14.31□□□□□ -0.12
PKP3-208ENST00000531857 RNF7Q9UBF6 113 aa14.31□□□□□ -0.12
PKP3-208ENST00000531857 TMEM5Q9Y2B1 443 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms