RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 CST1P01037 141 aa13.04□□□□□ -0.32
CPSF1-205ENST00000531042 IGHV1-69P01742 117 aa13.04□□□□□ -0.32
CPSF1-205ENST00000531042 MUC1P15941 1255 aaPredicted RBP13.04□□□□□ -0.32
CPSF1-205ENST00000531042 CALB2P22676 271 aa13.04□□□□□ -0.32
CPSF1-205ENST00000531042 GSK3AP49840 483 aa13.04□□□□□ -0.32
CPSF1-205ENST00000531042 ARF6P62330 175 aa13.04□□□□□ -0.32
CPSF1-205ENST00000531042 CSNK2BP67870 215 aa13.04□□□□□ -0.32
CPSF1-205ENST00000531042 GABPB1Q06547 395 aaPredicted RBP13.04□□□□□ -0.32
CPSF1-205ENST00000531042 MICBQ29980 383 aa13.04□□□□□ -0.32
CPSF1-205ENST00000531042 FIP1L1Q6UN15 594 aaKnown RBP13.04□□□□□ -0.32
CPSF1-205ENST00000531042 WDR82Q6UXN9 313 aa13.04□□□□□ -0.32
CPSF1-205ENST00000531042 TIGD4Q8IY51 512 aa13.04□□□□□ -0.32
CPSF1-205ENST00000531042 ST8SIA4Q92187 359 aa13.04□□□□□ -0.32
CPSF1-205ENST00000531042 LHX4Q969G2 390 aa13.04□□□□□ -0.32
CPSF1-205ENST00000531042 ASB9Q96DX5 294 aa13.04□□□□□ -0.32
CPSF1-205ENST00000531042 CCT8L2Q96SF2 557 aa13.04□□□□□ -0.32
CPSF1-205ENST00000531042 CCL13Q99616 98 aa13.04□□□□□ -0.32
CPSF1-205ENST00000531042 CHIAQ9BZP6 476 aa13.04□□□□□ -0.32
CPSF1-205ENST00000531042 OR10A2Q9H208 303 aa13.04□□□□□ -0.32
CPSF1-205ENST00000531042 BRD7Q9NPI1 651 aa13.04□□□□□ -0.32
CPSF1-205ENST00000531042 RPUSD1Q9UJJ7 312 aaKnown RBP13.04□□□□□ -0.32
CPSF1-205ENST00000531042 PRPF19Q9UMS4 504 aaKnown RBP13.04□□□□□ -0.32
CPSF1-205ENST00000531042 RHBDD3Q9Y3P4 386 aa13.04□□□□□ -0.32
CPSF1-205ENST00000531042 POMT1Q9Y6A1 747 aa13.04□□□□□ -0.32
CPSF1-205ENST00000531042 A0A1B0GUS0 222 aa13.03□□□□□ -0.32
CPSF1-205ENST00000531042 A0A1B0GW55 424 aa13.03□□□□□ -0.32
CPSF1-205ENST00000531042 ARRDC5A6NEK1 342 aa13.03□□□□□ -0.32
CPSF1-205ENST00000531042 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.03□□□□□ -0.32
CPSF1-205ENST00000531042 CRYBA1P05813 215 aa13.03□□□□□ -0.32
CPSF1-205ENST00000531042 H2BFMP0C1H6 154 aa13.03□□□□□ -0.32
CPSF1-205ENST00000531042 DUX4L2P0CJ85 424 aa13.03□□□□□ -0.32
CPSF1-205ENST00000531042 DUX4L3P0CJ86 424 aa13.03□□□□□ -0.32
CPSF1-205ENST00000531042 DUX4L4P0CJ87 422 aa13.03□□□□□ -0.32
CPSF1-205ENST00000531042 DUX4L5P0CJ88 424 aa13.03□□□□□ -0.32
CPSF1-205ENST00000531042 DUX4L6P0CJ89 424 aa13.03□□□□□ -0.32
CPSF1-205ENST00000531042 DUX4L7P0CJ90 424 aa13.03□□□□□ -0.32
CPSF1-205ENST00000531042 T-ENOLP0DO92 83 aa13.03□□□□□ -0.32
CPSF1-205ENST00000531042 GNALP38405 381 aa13.03□□□□□ -0.32
CPSF1-205ENST00000531042 NAA10P41227 235 aaPredicted RBP13.03□□□□□ -0.32
CPSF1-205ENST00000531042 RAG2P55895 527 aa13.03□□□□□ -0.32
CPSF1-205ENST00000531042 ELF3P78545 371 aaPredicted RBP13.03□□□□□ -0.32
CPSF1-205ENST00000531042 CBX1P83916 185 aa13.03□□□□□ -0.32
CPSF1-205ENST00000531042 GFOD2Q3B7J2 385 aa13.03□□□□□ -0.32
CPSF1-205ENST00000531042 WDR38Q5JTN6 314 aa13.03□□□□□ -0.32
CPSF1-205ENST00000531042 DUX4L9Q6RFH8 374 aaPredicted RBP13.03□□□□□ -0.32
CPSF1-205ENST00000531042 TREML4Q6UXN2 200 aa13.03□□□□□ -0.32
CPSF1-205ENST00000531042 FGFRL1Q8N441 504 aa13.03□□□□□ -0.32
CPSF1-205ENST00000531042 CSNK2A3Q8NEV1 391 aa13.03□□□□□ -0.32
CPSF1-205ENST00000531042 PGAM5Q96HS1 289 aa13.03□□□□□ -0.32
CPSF1-205ENST00000531042 LRGUKQ96M69 825 aa13.03□□□□□ -0.32
CPSF1-205ENST00000531042 CHID1Q9BWS9 393 aa13.03□□□□□ -0.32
CPSF1-205ENST00000531042 PAPOLGQ9BWT3 736 aaKnown RBP13.03□□□□□ -0.32
CPSF1-205ENST00000531042 TLNRD1Q9H1K6 362 aa13.03□□□□□ -0.32
CPSF1-205ENST00000531042 OR51V1Q9H2C8 321 aa13.03□□□□□ -0.32
CPSF1-205ENST00000531042 RGCCQ9H4X1 137 aa13.03□□□□□ -0.32
CPSF1-205ENST00000531042 CNTD2Q9H8S5 307 aa13.03□□□□□ -0.32
CPSF1-205ENST00000531042 BEX1Q9HBH7 125 aa13.03□□□□□ -0.32
CPSF1-205ENST00000531042 C1RLQ9NZP8 487 aa13.03□□□□□ -0.32
CPSF1-205ENST00000531042 DUX4Q9UBX2 424 aa13.03□□□□□ -0.32
CPSF1-205ENST00000531042 ACOT8O14734 319 aa13.02□□□□□ -0.33
CPSF1-205ENST00000531042 CDIPTO14735 213 aa13.02□□□□□ -0.33
CPSF1-205ENST00000531042 KCNAB3O43448 404 aa13.02□□□□□ -0.33
CPSF1-205ENST00000531042 KNG1P01042 644 aa13.02□□□□□ -0.33
CPSF1-205ENST00000531042 PAICSP22234 425 aaKnown RBP13.02□□□□□ -0.33
CPSF1-205ENST00000531042 RELBQ01201 579 aa13.02□□□□□ -0.33
CPSF1-205ENST00000531042 IL5RAQ01344 420 aa13.02□□□□□ -0.33
CPSF1-205ENST00000531042 SNCBQ16143 134 aa13.02□□□□□ -0.33
CPSF1-205ENST00000531042 CDONQ4KMG0 1287 aa13.02□□□□□ -0.33
CPSF1-205ENST00000531042 TMEM179BQ7Z7N9 219 aa13.02□□□□□ -0.33
CPSF1-205ENST00000531042 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.02□□□□□ -0.33
CPSF1-205ENST00000531042 ADGRG5Q8IZF4 528 aa13.02□□□□□ -0.33
CPSF1-205ENST00000531042 GALNT4Q8N4A0 578 aa13.02□□□□□ -0.33
CPSF1-205ENST00000531042 KIR3DL3Q8N743 410 aa13.02□□□□□ -0.33
CPSF1-205ENST00000531042 LY6G5BQ8NDX9 201 aa13.02□□□□□ -0.33
CPSF1-205ENST00000531042 OR4F5Q8NH21 305 aa13.02□□□□□ -0.33
CPSF1-205ENST00000531042 OTOSQ8NHW6 89 aa13.02□□□□□ -0.33
CPSF1-205ENST00000531042 THEM6Q8WUY1 208 aa13.02□□□□□ -0.33
CPSF1-205ENST00000531042 SSMEM1Q8WWF3 244 aa13.02□□□□□ -0.33
CPSF1-205ENST00000531042 C12orf43Q96C57 262 aaKnown RBP13.02□□□□□ -0.33
CPSF1-205ENST00000531042 CCDC124Q96CT7 223 aaKnown RBP13.02□□□□□ -0.33
CPSF1-205ENST00000531042 ITPKCQ96DU7 683 aa13.02□□□□□ -0.33
CPSF1-205ENST00000531042 SEH1LQ96EE3 360 aa13.02□□□□□ -0.33
CPSF1-205ENST00000531042 CLPTM1LQ96KA5 538 aa13.02□□□□□ -0.33
CPSF1-205ENST00000531042 MICU1Q9BPX6 476 aa13.02□□□□□ -0.33
CPSF1-205ENST00000531042 MPC1Q9Y5U8 109 aa13.02□□□□□ -0.33
CPSF1-205ENST00000531042 KPTNQ9Y664 436 aa13.02□□□□□ -0.33
CPSF1-205ENST00000531042 ANXA2P2A6NMY6 339 aa13.01□□□□□ -0.33
CPSF1-205ENST00000531042 PRR23D1E9PI22 279 aaPredicted RBP13.01□□□□□ -0.33
CPSF1-205ENST00000531042 SELENOFO60613 162 aa13.01□□□□□ -0.33
CPSF1-205ENST00000531042 NDUFA7O95182 113 aa13.01□□□□□ -0.33
CPSF1-205ENST00000531042 LYNP07948 512 aa13.01□□□□□ -0.33
CPSF1-205ENST00000531042 PRR23D2P0DMB1 279 aaPredicted RBP13.01□□□□□ -0.33
CPSF1-205ENST00000531042 AMY2BP19961 511 aa13.01□□□□□ -0.33
CPSF1-205ENST00000531042 POU1F1P28069 291 aa13.01□□□□□ -0.33
CPSF1-205ENST00000531042 GINS1Q14691 196 aa13.01□□□□□ -0.33
CPSF1-205ENST00000531042 PLBD1Q6P4A8 553 aa13.01□□□□□ -0.33
CPSF1-205ENST00000531042 SLC36A1Q7Z2H8 476 aa13.01□□□□□ -0.33
CPSF1-205ENST00000531042 VMO1Q7Z5L0 202 aa13.01□□□□□ -0.33
CPSF1-205ENST00000531042 FTMTQ8N4E7 242 aa13.01□□□□□ -0.33
CPSF1-205ENST00000531042 FAM216BQ8N7L0 139 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms