RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 FAM110DQ8TAY7 271 aaPredicted RBP13.03□□□□□ -0.32
CHMP4A-204ENST00000530996 OTULINQ96BN8 352 aa13.03□□□□□ -0.32
CHMP4A-204ENST00000530996 TSSK6Q9BXA6 273 aa13.03□□□□□ -0.32
CHMP4A-204ENST00000530996 MYLK2Q9H1R3 596 aa13.03□□□□□ -0.32
CHMP4A-204ENST00000530996 SP140LQ9H930 580 aa13.03□□□□□ -0.32
CHMP4A-204ENST00000530996 RNPEPL1Q9HAU8 725 aa13.03□□□□□ -0.32
CHMP4A-204ENST00000530996 IL1RAPQ9NPH3 570 aa13.03□□□□□ -0.32
CHMP4A-204ENST00000530996 VPREB3Q9UKI3 123 aa13.03□□□□□ -0.32
CHMP4A-204ENST00000530996 LYVE1Q9Y5Y7 322 aa13.03□□□□□ -0.32
CHMP4A-204ENST00000530996 TGP01266 2768 aa13.03□□□□□ -0.32
CHMP4A-204ENST00000530996 ANKRD61A6NGH8 418 aa13.02□□□□□ -0.33
CHMP4A-204ENST00000530996 ANXA2P2A6NMY6 339 aa13.02□□□□□ -0.33
CHMP4A-204ENST00000530996 ACOT8O14734 319 aa13.02□□□□□ -0.33
CHMP4A-204ENST00000530996 FCN3O75636 299 aa13.02□□□□□ -0.33
CHMP4A-204ENST00000530996 CLPXO76031 633 aa13.02□□□□□ -0.33
CHMP4A-204ENST00000530996 IFNGP01579 166 aa13.02□□□□□ -0.33
CHMP4A-204ENST00000530996 HSD17B1P14061 328 aa13.02□□□□□ -0.33
CHMP4A-204ENST00000530996 ZNF3P17036 446 aa13.02□□□□□ -0.33
CHMP4A-204ENST00000530996 SPI1P17947 270 aa13.02□□□□□ -0.33
CHMP4A-204ENST00000530996 CFL1P23528 166 aaKnown RBP13.02□□□□□ -0.33
CHMP4A-204ENST00000530996 PROK1P58294 105 aa13.02□□□□□ -0.33
CHMP4A-204ENST00000530996 WDR82Q6UXN9 313 aa13.02□□□□□ -0.33
CHMP4A-204ENST00000530996 Q6ZSV7 163 aa13.02□□□□□ -0.33
CHMP4A-204ENST00000530996 KCTD8Q6ZWB6 473 aa13.02□□□□□ -0.33
CHMP4A-204ENST00000530996 ERI1Q8IV48 349 aaKnown RBP13.02□□□□□ -0.33
CHMP4A-204ENST00000530996 FTMTQ8N4E7 242 aa13.02□□□□□ -0.33
CHMP4A-204ENST00000530996 AQP11Q8NBQ7 271 aa13.02□□□□□ -0.33
CHMP4A-204ENST00000530996 OR2T33Q8NG76 320 aa13.02□□□□□ -0.33
CHMP4A-204ENST00000530996 SPSB4Q96A44 273 aa13.02□□□□□ -0.33
CHMP4A-204ENST00000530996 SEH1LQ96EE3 360 aa13.02□□□□□ -0.33
CHMP4A-204ENST00000530996 MICU1Q9BPX6 476 aa13.02□□□□□ -0.33
CHMP4A-204ENST00000530996 RTL8AQ9BWD3 113 aa13.02□□□□□ -0.33
CHMP4A-204ENST00000530996 OR10A2Q9H208 303 aa13.02□□□□□ -0.33
CHMP4A-204ENST00000530996 ARMC1Q9NVT9 282 aa13.02□□□□□ -0.33
CHMP4A-204ENST00000530996 ZNF446Q9NWS9 450 aa13.02□□□□□ -0.33
CHMP4A-204ENST00000530996 ZNRD1Q9P1U0 126 aa13.02□□□□□ -0.33
CHMP4A-204ENST00000530996 PRPF19Q9UMS4 504 aaKnown RBP13.02□□□□□ -0.33
CHMP4A-204ENST00000530996 hCG_38984A0A1B0GV85 526 aa13.01□□□□□ -0.33
CHMP4A-204ENST00000530996 A0A1W2PQ09 198 aa13.01□□□□□ -0.33
CHMP4A-204ENST00000530996 CDIPTO14735 213 aa13.01□□□□□ -0.33
CHMP4A-204ENST00000530996 NPFFO15130 113 aa13.01□□□□□ -0.33
CHMP4A-204ENST00000530996 KRT36O76013 467 aa13.01□□□□□ -0.33
CHMP4A-204ENST00000530996 LHBP01229 141 aa13.01□□□□□ -0.33
CHMP4A-204ENST00000530996 CLUP10909 449 aa13.01□□□□□ -0.33
CHMP4A-204ENST00000530996 SELLP14151 372 aa13.01□□□□□ -0.33
CHMP4A-204ENST00000530996 DLX1P56177 255 aa13.01□□□□□ -0.33
CHMP4A-204ENST00000530996 FAM3AP98173 230 aa13.01□□□□□ -0.33
CHMP4A-204ENST00000530996 IL5RAQ01344 420 aa13.01□□□□□ -0.33
CHMP4A-204ENST00000530996 EGR3Q06889 387 aa13.01□□□□□ -0.33
CHMP4A-204ENST00000530996 RASSF6Q6ZTQ3 369 aa13.01□□□□□ -0.33
CHMP4A-204ENST00000530996 CPLX4Q7Z7G2 160 aa13.01□□□□□ -0.33
CHMP4A-204ENST00000530996 PGAM4Q8N0Y7 254 aa13.01□□□□□ -0.33
CHMP4A-204ENST00000530996 LINC00471Q8N535 108 aa13.01□□□□□ -0.33
CHMP4A-204ENST00000530996 OR5T2Q8NGG2 359 aa13.01□□□□□ -0.33
CHMP4A-204ENST00000530996 PGAM5Q96HS1 289 aa13.01□□□□□ -0.33
CHMP4A-204ENST00000530996 INTS14Q96SY0 518 aa13.01□□□□□ -0.33
CHMP4A-204ENST00000530996 CDRT15Q96T59 188 aa13.01□□□□□ -0.33
CHMP4A-204ENST00000530996 TOR3AQ9H497 397 aa13.01□□□□□ -0.33
CHMP4A-204ENST00000530996 SNTG1Q9NSN8 517 aa13.01□□□□□ -0.33
CHMP4A-204ENST00000530996 VWFP04275 2813 aa13.01□□□□□ -0.33
CHMP4A-204ENST00000530996 MEIOCA2RUB1 952 aa13□□□□□ -0.33
CHMP4A-204ENST00000530996 APOC1P02654 83 aa13□□□□□ -0.33
CHMP4A-204ENST00000530996 NDUFB7P17568 137 aa13□□□□□ -0.33
CHMP4A-204ENST00000530996 POU1F1P28069 291 aa13□□□□□ -0.33
CHMP4A-204ENST00000530996 GSK3AP49840 483 aa13□□□□□ -0.33
CHMP4A-204ENST00000530996 BLVRAP53004 296 aa13□□□□□ -0.33
CHMP4A-204ENST00000530996 ZNF121P58317 390 aaPredicted RBP13□□□□□ -0.33
CHMP4A-204ENST00000530996 SNCBQ16143 134 aa13□□□□□ -0.33
CHMP4A-204ENST00000530996 CYP2R1Q6VVX0 501 aa13□□□□□ -0.33
CHMP4A-204ENST00000530996 ZSCAN4Q8NAM6 433 aaPredicted RBP13□□□□□ -0.33
CHMP4A-204ENST00000530996 CSNK2A3Q8NEV1 391 aa13□□□□□ -0.33
CHMP4A-204ENST00000530996 OR52H1Q8NGJ2 320 aa13□□□□□ -0.33
CHMP4A-204ENST00000530996 C12orf43Q96C57 262 aaKnown RBP13□□□□□ -0.33
CHMP4A-204ENST00000530996 DCTN5Q9BTE1 182 aa13□□□□□ -0.33
CHMP4A-204ENST00000530996 PPA2Q9H2U2 334 aa13□□□□□ -0.33
CHMP4A-204ENST00000530996 CD300AQ9UGN4 299 aa13□□□□□ -0.33
CHMP4A-204ENST00000530996 ZNF391Q9UJN7 358 aa13□□□□□ -0.33
CHMP4A-204ENST00000530996 BAIAP2Q9UQB8 552 aa13□□□□□ -0.33
CHMP4A-204ENST00000530996 RHBDD3Q9Y3P4 386 aa13□□□□□ -0.33
CHMP4A-204ENST00000530996 NOTCH1P46531 2555 aa12.99□□□□□ -0.33
CHMP4A-204ENST00000530996 ZNF816-ZNF321PA0A0X1KG74 233 aa12.99□□□□□ -0.33
CHMP4A-204ENST00000530996 RNASEK-C17orf49H0YIS7 233 aa12.99□□□□□ -0.33
CHMP4A-204ENST00000530996 GASTP01350 101 aa12.99□□□□□ -0.33
CHMP4A-204ENST00000530996 CSF1P09603 554 aa12.99□□□□□ -0.33
CHMP4A-204ENST00000530996 H2BFMP0C1H6 154 aa12.99□□□□□ -0.33
CHMP4A-204ENST00000530996 SAA4P35542 130 aa12.99□□□□□ -0.33
CHMP4A-204ENST00000530996 SLC25A1P53007 311 aa12.99□□□□□ -0.33
CHMP4A-204ENST00000530996 PPP1R8Q12972 351 aaKnown RBP12.99□□□□□ -0.33
CHMP4A-204ENST00000530996 STUMQ69YW2 141 aa12.99□□□□□ -0.33
CHMP4A-204ENST00000530996 C16orf89Q6UX73 402 aa12.99□□□□□ -0.33
CHMP4A-204ENST00000530996 PNKDQ8N490 385 aa12.99□□□□□ -0.33
CHMP4A-204ENST00000530996 OR4Q3Q8NH05 313 aa12.99□□□□□ -0.33
CHMP4A-204ENST00000530996 TEX47Q8TBZ9 253 aa12.99□□□□□ -0.33
CHMP4A-204ENST00000530996 NPRL2Q8WTW4 380 aa12.99□□□□□ -0.33
CHMP4A-204ENST00000530996 RPL3LQ92901 407 aaKnown RBP12.99□□□□□ -0.33
CHMP4A-204ENST00000530996 DDOQ99489 341 aa12.99□□□□□ -0.33
CHMP4A-204ENST00000530996 PPP1R3EQ9H7J1 279 aa12.99□□□□□ -0.33
CHMP4A-204ENST00000530996 MED20Q9H944 212 aa12.99□□□□□ -0.33
CHMP4A-204ENST00000530996 MED4Q9NPJ6 270 aa12.99□□□□□ -0.33
CHMP4A-204ENST00000530996 HAO2Q9NYQ3 351 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms