RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 BVESQ8NE79 360 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 ERGIC1Q969X5 290 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 UTP4Q969X6 686 aaKnown RBP6.57□□□□□ -1.36
CTNND1-216ENST00000527467 SLC25A46Q96AG3 418 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 THOC3Q96J01 351 aaKnown RBP6.57□□□□□ -1.36
CTNND1-216ENST00000527467 TBX15Q96SF7 602 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 NTPCRQ9BSD7 190 aaKnown RBP6.57□□□□□ -1.36
CTNND1-216ENST00000527467 CDCP1Q9H5V8 836 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 ADGRL4Q9HBW9 690 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 POMT2Q9UKY4 750 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 UFC1Q9Y3C8 167 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 MYH3P11055 1940 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 DOCK2Q92608 1830 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 JUNBP17275 347 aaPredicted RBP6.57□□□□□ -1.36
CTNND1-216ENST00000527467 MDH2P40926 338 aaKnown RBP6.57□□□□□ -1.36
CTNND1-216ENST00000527467 CCR2P41597 374 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 HINT1P49773 126 aaPredicted RBP6.57□□□□□ -1.36
CTNND1-216ENST00000527467 SLC25A11Q02978 314 aaKnown RBP6.57□□□□□ -1.36
CTNND1-216ENST00000527467 RIGQ13278 110 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 ECM1Q16610 540 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 TRMT12Q53H54 448 aaKnown RBP6.57□□□□□ -1.36
CTNND1-216ENST00000527467 IER5LQ5T953 404 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 PRAMEF20Q5VT98 475 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 CALHM1Q8IU99 346 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 BEND2Q8NDZ0 799 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 CADM4Q8NFZ8 388 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 OR1L1Q8NH94 360 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 SNX22Q96L94 193 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 IKZF4Q9H2S9 585 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 VCX2Q9H322 139 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 PLSCR3Q9NRY6 295 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 NAT8Q9UHE5 227 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 MFNGO00587 321 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 PDE6DO43924 150 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 HIST1H1TP22492 207 aaPredicted RBP6.57□□□□□ -1.36
CTNND1-216ENST00000527467 ARRB2P32121 409 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 ERVS71-1P61550 626 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 RPS16P62249 146 aaKnown RBP6.57□□□□□ -1.36
CTNND1-216ENST00000527467 RHOBP62745 196 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 HOXC5Q00444 222 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 NHSL2Q5HYW2 709 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 OR5M10Q6IEU7 315 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 OR8A1Q8NGG7 326 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 OR10X1Q8NGY0 326 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 SCAMP4Q969E2 229 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 NTNG2Q96CW9 530 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 WDR89Q96FK6 387 aaPredicted RBP6.57□□□□□ -1.36
CTNND1-216ENST00000527467 LRRC3BQ96PB8 259 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 TMEM140Q9NV12 185 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 IL20Q9NYY1 176 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 C5AR2Q9P296 337 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 CTSFQ9UBX1 484 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 RCL1Q9Y2P8 373 aaKnown RBP6.57□□□□□ -1.36
CTNND1-216ENST00000527467 UBE2L5PA0A1B0GUS4 154 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 SLC5A10A0PJK1 596 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 M0QZQ0 153 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 HPP00738 406 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 CTSLP07711 333 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 NDUFB7P17568 137 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 PXNP49023 591 aaPredicted RBP6.57□□□□□ -1.36
CTNND1-216ENST00000527467 RBM11P57052 281 aaKnown RBP6.57□□□□□ -1.36
CTNND1-216ENST00000527467 STARD6P59095 220 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 DSC1Q08554 894 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 PLXDC2Q6UX71 529 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 MUC15Q8N387 334 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 MRGPRX2Q96LB1 330 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 OR2A14Q96R47 310 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 MAGT1Q9H0U3 335 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 PHIPQ8WWQ0 1821 aa6.57□□□□□ -1.36
CTNND1-216ENST00000527467 SYNGR2O43760 224 aa6.56□□□□□ -1.36
CTNND1-216ENST00000527467 GLI4P10075 376 aa6.56□□□□□ -1.36
CTNND1-216ENST00000527467 KIR2DL3P43628 341 aa6.56□□□□□ -1.36
CTNND1-216ENST00000527467 UBE2MP61081 183 aaKnown RBP6.56□□□□□ -1.36
CTNND1-216ENST00000527467 BSXQ3C1V8 233 aa6.56□□□□□ -1.36
CTNND1-216ENST00000527467 ANKRD55Q3KP44 614 aa6.56□□□□□ -1.36
CTNND1-216ENST00000527467 Q56UQ5 140 aa6.56□□□□□ -1.36
CTNND1-216ENST00000527467 C9orf135Q5VTT2 229 aa6.56□□□□□ -1.36
CTNND1-216ENST00000527467 YOD1Q5VVQ6 348 aaPredicted RBP6.56□□□□□ -1.36
CTNND1-216ENST00000527467 TXNRD3NBQ6F5E7 133 aa6.56□□□□□ -1.36
CTNND1-216ENST00000527467 SPRED1Q7Z699 444 aa6.56□□□□□ -1.36
CTNND1-216ENST00000527467 YRDCQ86U90 279 aaKnown RBP6.56□□□□□ -1.36
CTNND1-216ENST00000527467 LINC00469Q8N7U9 141 aa6.56□□□□□ -1.36
CTNND1-216ENST00000527467 RNF133Q8WVZ7 376 aa6.56□□□□□ -1.36
CTNND1-216ENST00000527467 FER1L6-AS2Q96M78 137 aa6.56□□□□□ -1.36
CTNND1-216ENST00000527467 JAM3Q9BX67 310 aa6.56□□□□□ -1.36
CTNND1-216ENST00000527467 ANGPTL4Q9BY76 406 aa6.56□□□□□ -1.36
CTNND1-216ENST00000527467 EGLN1Q9GZT9 426 aa6.56□□□□□ -1.36
CTNND1-216ENST00000527467 CBLCQ9ULV8 474 aa6.56□□□□□ -1.36
CTNND1-216ENST00000527467 IGKV6-21A0A0C4DH24 114 aa6.56□□□□□ -1.36
CTNND1-216ENST00000527467 OR2A25A4D2G3 310 aa6.56□□□□□ -1.36
CTNND1-216ENST00000527467 DNAL4O96015 105 aa6.56□□□□□ -1.36
CTNND1-216ENST00000527467 ANKRD34CP0C6C1 535 aa6.56□□□□□ -1.36
CTNND1-216ENST00000527467 HIST1H1BP16401 226 aaKnown RBP6.56□□□□□ -1.36
CTNND1-216ENST00000527467 FOLR3P41439 243 aa6.56□□□□□ -1.36
CTNND1-216ENST00000527467 CDKN2DP55273 166 aa6.56□□□□□ -1.36
CTNND1-216ENST00000527467 CLDN17P56750 224 aa6.56□□□□□ -1.36
CTNND1-216ENST00000527467 DCAF7P61962 342 aa6.56□□□□□ -1.36
CTNND1-216ENST00000527467 IZUMO4Q1ZYL8 232 aa6.56□□□□□ -1.36
CTNND1-216ENST00000527467 VWA2Q5GFL6 755 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms