RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 OR1M1Q8NGA1 313 aa13.19□□□□□ -0.3
PTPRU-210ENST00000527027 OR2T4Q8NH00 348 aa13.19□□□□□ -0.3
PTPRU-210ENST00000527027 TNFRSF14Q92956 283 aa13.19□□□□□ -0.3
PTPRU-210ENST00000527027 C12orf43Q96C57 262 aaKnown RBP13.19□□□□□ -0.3
PTPRU-210ENST00000527027 DDOQ99489 341 aa13.19□□□□□ -0.3
PTPRU-210ENST00000527027 MYLK2Q9H1R3 596 aa13.19□□□□□ -0.3
PTPRU-210ENST00000527027 CENPMQ9NSP4 180 aa13.19□□□□□ -0.3
PTPRU-210ENST00000527027 TIPRLO75663 272 aa13.18□□□□□ -0.3
PTPRU-210ENST00000527027 PSKH1P11801 424 aa13.18□□□□□ -0.3
PTPRU-210ENST00000527027 AMY2BP19961 511 aa13.18□□□□□ -0.3
PTPRU-210ENST00000527027 SAA4P35542 130 aa13.18□□□□□ -0.3
PTPRU-210ENST00000527027 MNAT1P51948 309 aa13.18□□□□□ -0.3
PTPRU-210ENST00000527027 UBE2E1P51965 193 aa13.18□□□□□ -0.3
PTPRU-210ENST00000527027 DLX1P56177 255 aa13.18□□□□□ -0.3
PTPRU-210ENST00000527027 CSNK2BP67870 215 aa13.18□□□□□ -0.3
PTPRU-210ENST00000527027 FAM3AP98173 230 aa13.18□□□□□ -0.3
PTPRU-210ENST00000527027 SPIBQ01892 262 aa13.18□□□□□ -0.3
PTPRU-210ENST00000527027 GABPB1Q06547 395 aaPredicted RBP13.18□□□□□ -0.3
PTPRU-210ENST00000527027 KLRD1Q13241 179 aa13.18□□□□□ -0.3
PTPRU-210ENST00000527027 LRRC10Q5BKY1 277 aa13.18□□□□□ -0.3
PTPRU-210ENST00000527027 Q6ZPA2 131 aa13.18□□□□□ -0.3
PTPRU-210ENST00000527027 SLC16A9Q7RTY1 509 aa13.18□□□□□ -0.3
PTPRU-210ENST00000527027 C8orf46Q8TAG6 207 aa13.18□□□□□ -0.3
PTPRU-210ENST00000527027 ZNRF4Q8WWF5 429 aa13.18□□□□□ -0.3
PTPRU-210ENST00000527027 SLAMF6Q96DU3 332 aa13.18□□□□□ -0.3
PTPRU-210ENST00000527027 SEH1LQ96EE3 360 aa13.18□□□□□ -0.3
PTPRU-210ENST00000527027 ABCD2Q9UBJ2 740 aa13.18□□□□□ -0.3
PTPRU-210ENST00000527027 CDIPTO14735 213 aa13.17□□□□□ -0.3
PTPRU-210ENST00000527027 GMNNO75496 209 aa13.17□□□□□ -0.3
PTPRU-210ENST00000527027 KIR2DS4P43632 304 aa13.17□□□□□ -0.3
PTPRU-210ENST00000527027 NUDT2P50583 147 aa13.17□□□□□ -0.3
PTPRU-210ENST00000527027 ACSM1Q08AH1 577 aa13.17□□□□□ -0.3
PTPRU-210ENST00000527027 TSPAN31Q12999 210 aa13.17□□□□□ -0.3
PTPRU-210ENST00000527027 FAM189A2Q15884 450 aa13.17□□□□□ -0.3
PTPRU-210ENST00000527027 STUMQ69YW2 141 aa13.17□□□□□ -0.3
PTPRU-210ENST00000527027 C11orf88Q6PI97 169 aa13.17□□□□□ -0.3
PTPRU-210ENST00000527027 LYPD4Q6UWN0 246 aa13.17□□□□□ -0.3
PTPRU-210ENST00000527027 REC114Q7Z4M0 266 aa13.17□□□□□ -0.3
PTPRU-210ENST00000527027 PNKDQ8N490 385 aa13.17□□□□□ -0.3
PTPRU-210ENST00000527027 BEND2Q8NDZ0 799 aa13.17□□□□□ -0.3
PTPRU-210ENST00000527027 OR5T2Q8NGG2 359 aa13.17□□□□□ -0.3
PTPRU-210ENST00000527027 OR51L1Q8NGJ5 315 aa13.17□□□□□ -0.3
PTPRU-210ENST00000527027 OR9Q1Q8NGQ5 310 aa13.17□□□□□ -0.3
PTPRU-210ENST00000527027 PPP1R35Q8TAP8 253 aa13.17□□□□□ -0.3
PTPRU-210ENST00000527027 GNPDA2Q8TDQ7 276 aa13.17□□□□□ -0.3
PTPRU-210ENST00000527027 H1FXQ92522 213 aaKnown RBP13.17□□□□□ -0.3
PTPRU-210ENST00000527027 SGK3Q96BR1 496 aa13.17□□□□□ -0.3
PTPRU-210ENST00000527027 PYURFQ96I23 114 aa13.17□□□□□ -0.3
PTPRU-210ENST00000527027 DNTTIP1Q9H147 329 aa13.17□□□□□ -0.3
PTPRU-210ENST00000527027 HAO2Q9NYQ3 351 aa13.17□□□□□ -0.3
PTPRU-210ENST00000527027 CD300AQ9UGN4 299 aa13.17□□□□□ -0.3
PTPRU-210ENST00000527027 SIGLEC9Q9Y336 463 aa13.17□□□□□ -0.3
PTPRU-210ENST00000527027 COMMD3-BMI1R4GMX3 469 aa13.17□□□□□ -0.3
PTPRU-210ENST00000527027 NOTCH3Q9UM47 2321 aa13.16□□□□□ -0.3
PTPRU-210ENST00000527027 ZNF878C9JN71 531 aa13.16□□□□□ -0.3
PTPRU-210ENST00000527027 ZNF593O00488 134 aaPredicted RBP13.16□□□□□ -0.3
PTPRU-210ENST00000527027 TBX1O43435 398 aa13.16□□□□□ -0.3
PTPRU-210ENST00000527027 PRB2P02812 416 aaPredicted RBP13.16□□□□□ -0.3
PTPRU-210ENST00000527027 SPARCP09486 303 aa13.16□□□□□ -0.3
PTPRU-210ENST00000527027 FMO3P31513 532 aa13.16□□□□□ -0.3
PTPRU-210ENST00000527027 SLC15A1P46059 708 aa13.16□□□□□ -0.3
PTPRU-210ENST00000527027 ENTPD1P49961 510 aa13.16□□□□□ -0.3
PTPRU-210ENST00000527027 EFNB2P52799 333 aa13.16□□□□□ -0.3
PTPRU-210ENST00000527027 PSME3P61289 254 aa13.16□□□□□ -0.3
PTPRU-210ENST00000527027 TEX30Q5JUR7 227 aa13.16□□□□□ -0.3
PTPRU-210ENST00000527027 NCR3LG1Q68D85 454 aa13.16□□□□□ -0.3
PTPRU-210ENST00000527027 TRPM8Q7Z2W7 1104 aa13.16□□□□□ -0.3
PTPRU-210ENST00000527027 CFHR4Q92496 578 aa13.16□□□□□ -0.3
PTPRU-210ENST00000527027 MED30Q96HR3 178 aa13.16□□□□□ -0.3
PTPRU-210ENST00000527027 REEP6Q96HR9 211 aa13.16□□□□□ -0.3
PTPRU-210ENST00000527027 FAM234AQ9H0X4 552 aa13.16□□□□□ -0.3
PTPRU-210ENST00000527027 TLNRD1Q9H1K6 362 aa13.16□□□□□ -0.3
PTPRU-210ENST00000527027 EGLN3Q9H6Z9 239 aa13.16□□□□□ -0.3
PTPRU-210ENST00000527027 METTL8Q9H825 291 aaKnown RBP13.16□□□□□ -0.3
PTPRU-210ENST00000527027 GORASP2Q9H8Y8 452 aa13.16□□□□□ -0.3
PTPRU-210ENST00000527027 TET2Q6N021 2002 aaPredicted RBP13.16□□□□□ -0.3
PTPRU-210ENST00000527027 H3BUX3 64 aa13.15□□□□□ -0.3
PTPRU-210ENST00000527027 M0R1W7 72 aa13.15□□□□□ -0.3
PTPRU-210ENST00000527027 PIN1P1O15428 100 aa13.15□□□□□ -0.3
PTPRU-210ENST00000527027 SEMG1P04279 462 aa13.15□□□□□ -0.3
PTPRU-210ENST00000527027 SELLP14151 372 aa13.15□□□□□ -0.3
PTPRU-210ENST00000527027 GNALP38405 381 aa13.15□□□□□ -0.3
PTPRU-210ENST00000527027 BLMHQ13867 455 aa13.15□□□□□ -0.3
PTPRU-210ENST00000527027 TIGD6Q17RP2 521 aa13.15□□□□□ -0.3
PTPRU-210ENST00000527027 RPL13AP3Q6NVV1 102 aa13.15□□□□□ -0.3
PTPRU-210ENST00000527027 PGBD2Q6P3X8 592 aa13.15□□□□□ -0.3
PTPRU-210ENST00000527027 C11orf44Q8N8P7 122 aa13.15□□□□□ -0.3
PTPRU-210ENST00000527027 ZNF511Q8NB15 262 aa13.15□□□□□ -0.3
PTPRU-210ENST00000527027 OR52L1Q8NGH7 329 aa13.15□□□□□ -0.3
PTPRU-210ENST00000527027 PPP1R3EQ9H7J1 279 aa13.15□□□□□ -0.3
PTPRU-210ENST00000527027 SP140LQ9H930 580 aa13.15□□□□□ -0.3
PTPRU-210ENST00000527027 SNTG1Q9NSN8 517 aa13.15□□□□□ -0.3
PTPRU-210ENST00000527027 NDE1Q9NXR1 346 aa13.15□□□□□ -0.3
PTPRU-210ENST00000527027 ZNF391Q9UJN7 358 aa13.15□□□□□ -0.3
PTPRU-210ENST00000527027 FOXJ3Q9UPW0 622 aa13.15□□□□□ -0.3
PTPRU-210ENST00000527027 MAB21L2Q9Y586 359 aa13.15□□□□□ -0.3
PTPRU-210ENST00000527027 V9GYQ6 96 aa13.15□□□□□ -0.3
PTPRU-210ENST00000527027 ANXA2P07355 339 aaKnown RBP13.14□□□□□ -0.31
PTPRU-210ENST00000527027 CFL1P23528 166 aaKnown RBP13.14□□□□□ -0.31
PTPRU-210ENST00000527027 CX3CR1P49238 355 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms