RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 GPER1Q99527 375 aa15.43■□□□□ 0.06
USH1C-205ENST00000527020 LAMTOR5O43504 91 aa15.42■□□□□ 0.06
USH1C-205ENST00000527020 CRTAPO75718 401 aaPredicted RBP15.42■□□□□ 0.06
USH1C-205ENST00000527020 DBHP09172 617 aa15.42■□□□□ 0.06
USH1C-205ENST00000527020 GUCA1AP43080 201 aaPredicted RBP15.42■□□□□ 0.06
USH1C-205ENST00000527020 Q0VFX4 171 aa15.42■□□□□ 0.06
USH1C-205ENST00000527020 ECH1Q13011 328 aa15.42■□□□□ 0.06
USH1C-205ENST00000527020 KISS1Q15726 138 aa15.42■□□□□ 0.06
USH1C-205ENST00000527020 UBE2V2Q15819 145 aa15.42■□□□□ 0.06
USH1C-205ENST00000527020 FAHD2BQ6P2I3 314 aaPredicted RBP15.42■□□□□ 0.06
USH1C-205ENST00000527020 FAM89BQ8N5H3 189 aa15.42■□□□□ 0.06
USH1C-205ENST00000527020 OR5D18Q8NGL1 313 aa15.42■□□□□ 0.06
USH1C-205ENST00000527020 LRRC20Q8TCA0 184 aa15.42■□□□□ 0.06
USH1C-205ENST00000527020 NPRL2Q8WTW4 380 aa15.42■□□□□ 0.06
USH1C-205ENST00000527020 FBXO17Q96EF6 278 aa15.42■□□□□ 0.06
USH1C-205ENST00000527020 FAHD2AQ96GK7 314 aa15.42■□□□□ 0.06
USH1C-205ENST00000527020 SEC22AQ96IW7 307 aa15.42■□□□□ 0.06
USH1C-205ENST00000527020 MED9Q9NWA0 146 aa15.42■□□□□ 0.06
USH1C-205ENST00000527020 MFSD2BA6NFX1 497 aa15.42■□□□□ 0.06
USH1C-205ENST00000527020 FOXI3A8MTJ6 420 aaPredicted RBP15.42■□□□□ 0.06
USH1C-205ENST00000527020 SCO1O75880 301 aa15.42■□□□□ 0.06
USH1C-205ENST00000527020 DHRS3O75911 302 aa15.42■□□□□ 0.06
USH1C-205ENST00000527020 FAHP16930 419 aa15.42■□□□□ 0.06
USH1C-205ENST00000527020 AVPR2P30518 371 aa15.42■□□□□ 0.06
USH1C-205ENST00000527020 THBS4P35443 961 aa15.42■□□□□ 0.06
USH1C-205ENST00000527020 SLC6A9P48067 706 aa15.42■□□□□ 0.06
USH1C-205ENST00000527020 RPS18P62269 152 aaKnown RBP15.42■□□□□ 0.06
USH1C-205ENST00000527020 IL13RA1P78552 427 aa15.42■□□□□ 0.06
USH1C-205ENST00000527020 EIF3IQ13347 325 aaKnown RBP15.42■□□□□ 0.06
USH1C-205ENST00000527020 PPP1R32Q7Z5V6 425 aa15.42■□□□□ 0.06
USH1C-205ENST00000527020 C20orf196Q8IYI0 205 aa15.42■□□□□ 0.06
USH1C-205ENST00000527020 MARCH1Q8TCQ1 289 aa15.42■□□□□ 0.06
USH1C-205ENST00000527020 FBXW5Q969U6 566 aa15.42■□□□□ 0.06
USH1C-205ENST00000527020 IFNA6P05013 189 aa15.41■□□□□ 0.06
USH1C-205ENST00000527020 UBBP0CG47 229 aa15.41■□□□□ 0.06
USH1C-205ENST00000527020 NAT2P11245 290 aa15.41■□□□□ 0.06
USH1C-205ENST00000527020 NTF4P34130 210 aa15.41■□□□□ 0.06
USH1C-205ENST00000527020 PTGFRP43088 359 aa15.41■□□□□ 0.06
USH1C-205ENST00000527020 ALDH3B1P43353 468 aa15.41■□□□□ 0.06
USH1C-205ENST00000527020 RPS27AP62979 156 aaKnown RBP15.41■□□□□ 0.06
USH1C-205ENST00000527020 ZNF775Q96BV0 537 aaPredicted RBP15.41■□□□□ 0.06
USH1C-205ENST00000527020 OCSTAMPQ9BR26 566 aa15.41■□□□□ 0.06
USH1C-205ENST00000527020 PIGQQ9BRB3 760 aa15.41■□□□□ 0.06
USH1C-205ENST00000527020 ULBP2Q9BZM5 246 aa15.41■□□□□ 0.06
USH1C-205ENST00000527020 SDHAF2Q9NX18 166 aa15.41■□□□□ 0.06
USH1C-205ENST00000527020 KCNMB2Q9Y691 235 aa15.41■□□□□ 0.06
USH1C-205ENST00000527020 RLN2P04090 185 aa15.41■□□□□ 0.06
USH1C-205ENST00000527020 SLC25A4P12235 298 aa15.41■□□□□ 0.06
USH1C-205ENST00000527020 RGS19P49795 217 aa15.41■□□□□ 0.06
USH1C-205ENST00000527020 FGL1Q08830 312 aa15.41■□□□□ 0.06
USH1C-205ENST00000527020 PNLIPRP3Q17RR3 467 aa15.41■□□□□ 0.06
USH1C-205ENST00000527020 VAX1Q5SQQ9 334 aa15.41■□□□□ 0.06
USH1C-205ENST00000527020 C11orf87Q6NUJ2 197 aa15.41■□□□□ 0.06
USH1C-205ENST00000527020 SLC51BQ86UW2 128 aa15.41■□□□□ 0.06
USH1C-205ENST00000527020 OR56B1Q8NGI3 324 aa15.41■□□□□ 0.06
USH1C-205ENST00000527020 SLC39A7Q92504 469 aa15.41■□□□□ 0.06
USH1C-205ENST00000527020 WDR13Q9H1Z4 485 aa15.41■□□□□ 0.06
USH1C-205ENST00000527020 SMOC1Q9H4F8 434 aa15.41■□□□□ 0.06
USH1C-205ENST00000527020 TNFSF18Q9UNG2 199 aa15.41■□□□□ 0.06
USH1C-205ENST00000527020 FLVCR1Q9Y5Y0 555 aa15.41■□□□□ 0.06
USH1C-205ENST00000527020 DOCK10Q96BY6 2186 aa15.41■□□□□ 0.06
USH1C-205ENST00000527020 ZSCAN5BA6NJL1 495 aa15.4■□□□□ 0.06
USH1C-205ENST00000527020 SPDEFO95238 335 aa15.4■□□□□ 0.06
USH1C-205ENST00000527020 AKR1C4P17516 323 aa15.4■□□□□ 0.06
USH1C-205ENST00000527020 AGTR1P30556 359 aa15.4■□□□□ 0.06
USH1C-205ENST00000527020 ATP1B3P54709 279 aa15.4■□□□□ 0.06
USH1C-205ENST00000527020 SLC23A3Q6PIS1 610 aa15.4■□□□□ 0.06
USH1C-205ENST00000527020 YRDCQ86U90 279 aaKnown RBP15.4■□□□□ 0.06
USH1C-205ENST00000527020 OR5M9Q8NGP3 310 aa15.4■□□□□ 0.06
USH1C-205ENST00000527020 TERB2Q8NHR7 220 aa15.4■□□□□ 0.06
USH1C-205ENST00000527020 SUN5Q8TC36 379 aa15.4■□□□□ 0.06
USH1C-205ENST00000527020 PPP1R1CQ8WVI7 109 aa15.4■□□□□ 0.06
USH1C-205ENST00000527020 C17orf50Q8WW18 174 aa15.4■□□□□ 0.06
USH1C-205ENST00000527020 CCDC120Q96HB5 630 aa15.4■□□□□ 0.06
USH1C-205ENST00000527020 PHB2Q99623 299 aa15.4■□□□□ 0.06
USH1C-205ENST00000527020 PDCD10Q9BUL8 212 aa15.4■□□□□ 0.06
USH1C-205ENST00000527020 CHST5Q9GZS9 411 aa15.4■□□□□ 0.06
USH1C-205ENST00000527020 OR10A2Q9H208 303 aa15.4■□□□□ 0.06
USH1C-205ENST00000527020 DBX1A6NMT0 343 aa15.39■□□□□ 0.05
USH1C-205ENST00000527020 STMND1H3BQB6 276 aa15.39■□□□□ 0.05
USH1C-205ENST00000527020 M0R135 149 aa15.39■□□□□ 0.05
USH1C-205ENST00000527020 HOXD11P31277 338 aaPredicted RBP15.39■□□□□ 0.05
USH1C-205ENST00000527020 MRPS34P82930 218 aaKnown RBP15.39■□□□□ 0.05
USH1C-205ENST00000527020 SNAI3Q3KNW1 292 aa15.39■□□□□ 0.05
USH1C-205ENST00000527020 LRRC37A5PQ49AS3 106 aa15.39■□□□□ 0.05
USH1C-205ENST00000527020 JMJD6Q6NYC1 403 aaPredicted RBP15.39■□□□□ 0.05
USH1C-205ENST00000527020 GGNQ86UU5 652 aa15.39■□□□□ 0.05
USH1C-205ENST00000527020 KCNRGQ8N5I3 272 aa15.39■□□□□ 0.05
USH1C-205ENST00000527020 CASTOR1Q8WTX7 329 aa15.39■□□□□ 0.05
USH1C-205ENST00000527020 INTS12Q96CB8 462 aaKnown RBP15.39■□□□□ 0.05
USH1C-205ENST00000527020 ZNF799Q96GE5 643 aa15.39■□□□□ 0.05
USH1C-205ENST00000527020 SGCZQ96LD1 299 aa15.39■□□□□ 0.05
USH1C-205ENST00000527020 DHRS9Q9BPW9 319 aa15.39■□□□□ 0.05
USH1C-205ENST00000527020 URM1Q9BTM9 101 aaKnown RBP15.39■□□□□ 0.05
USH1C-205ENST00000527020 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.39■□□□□ 0.05
USH1C-205ENST00000527020 PIGLQ9Y2B2 252 aa15.39■□□□□ 0.05
USH1C-205ENST00000527020 PCDHGA1Q9Y5H4 931 aa15.39■□□□□ 0.05
USH1C-205ENST00000527020 RNF222A6NCQ9 220 aa15.39■□□□□ 0.05
USH1C-205ENST00000527020 CEACAM18A8MTB9 384 aa15.39■□□□□ 0.05
USH1C-205ENST00000527020 B4E171 279 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms