RNA–Protein interactions for RNA: ENST00000526204.5

VPS28-205, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,120 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-205ENST00000526204 CSNK2A1P68400 391 aaPredicted RBP18.69■□□□□ 0.58
VPS28-205ENST00000526204 KISS1Q15726 138 aa18.69■□□□□ 0.58
VPS28-205ENST00000526204 RTN4RL2Q86UN3 420 aa18.69■□□□□ 0.58
VPS28-205ENST00000526204 CCDC54Q8NEL0 328 aa18.69■□□□□ 0.58
VPS28-205ENST00000526204 PP6455Q8WZ26 134 aa18.69■□□□□ 0.58
VPS28-205ENST00000526204 GPR132Q9UNW8 380 aa18.69■□□□□ 0.58
VPS28-205ENST00000526204 ANOS1P23352 680 aa18.68■□□□□ 0.58
VPS28-205ENST00000526204 LUMP51884 338 aaPredicted RBP18.68■□□□□ 0.58
VPS28-205ENST00000526204 MOB3CQ70IA8 216 aa18.68■□□□□ 0.58
VPS28-205ENST00000526204 TMEM17Q86X19 198 aa18.68■□□□□ 0.58
VPS28-205ENST00000526204 RELL2Q8NC24 303 aaPredicted RBP18.68■□□□□ 0.58
VPS28-205ENST00000526204 OR5H2Q8NGV7 314 aa18.68■□□□□ 0.58
VPS28-205ENST00000526204 OR10K1Q8NGX5 313 aa18.68■□□□□ 0.58
VPS28-205ENST00000526204 INTS12Q96CB8 462 aaKnown RBP18.68■□□□□ 0.58
VPS28-205ENST00000526204 ARHGAP5-AS1Q96IT6 56 aa18.68■□□□□ 0.58
VPS28-205ENST00000526204 ZNF471Q9BX82 626 aaPredicted RBP18.68■□□□□ 0.58
VPS28-205ENST00000526204 NMES1Q9C002 83 aa18.68■□□□□ 0.58
VPS28-205ENST00000526204 WDR13Q9H1Z4 485 aa18.68■□□□□ 0.58
VPS28-205ENST00000526204 FSCN3Q9NQT6 498 aa18.68■□□□□ 0.58
VPS28-205ENST00000526204 C5orf51A6NDU8 294 aa18.68■□□□□ 0.58
VPS28-205ENST00000526204 C9J4A7 227 aa18.68■□□□□ 0.58
VPS28-205ENST00000526204 DHRS3O75911 302 aa18.68■□□□□ 0.58
VPS28-205ENST00000526204 UMODP07911 640 aa18.68■□□□□ 0.58
VPS28-205ENST00000526204 PSMB6P28072 239 aa18.68■□□□□ 0.58
VPS28-205ENST00000526204 SSR4P51571 173 aa18.68■□□□□ 0.58
VPS28-205ENST00000526204 ARFRP1Q13795 201 aa18.68■□□□□ 0.58
VPS28-205ENST00000526204 ENDOGQ14249 297 aaKnown RBP18.68■□□□□ 0.58
VPS28-205ENST00000526204 ARL6IP1Q15041 203 aa18.68■□□□□ 0.58
VPS28-205ENST00000526204 RAET1LQ5VY80 246 aa18.68■□□□□ 0.58
VPS28-205ENST00000526204 SPERTQ8NA61 448 aa18.68■□□□□ 0.58
VPS28-205ENST00000526204 OR51T1Q8NGJ9 327 aa18.68■□□□□ 0.58
VPS28-205ENST00000526204 PAQR8Q8TEZ7 354 aa18.68■□□□□ 0.58
VPS28-205ENST00000526204 C10orf35Q96D05 121 aa18.68■□□□□ 0.58
VPS28-205ENST00000526204 GAREM1Q9H706 876 aa18.68■□□□□ 0.58
VPS28-205ENST00000526204 PTRH2Q9Y3E5 179 aaKnown RBP18.68■□□□□ 0.58
VPS28-205ENST00000526204 V9GYS6 101 aa18.68■□□□□ 0.58
VPS28-205ENST00000526204 VCANP13611 3396 aa18.68■□□□□ 0.58
VPS28-205ENST00000526204 PHF3Q92576 2039 aaKnown RBP18.67■□□□□ 0.58
VPS28-205ENST00000526204 CRHP06850 196 aa18.67■□□□□ 0.58
VPS28-205ENST00000526204 CELA2AP08217 269 aa18.67■□□□□ 0.58
VPS28-205ENST00000526204 NAT2P11245 290 aa18.67■□□□□ 0.58
VPS28-205ENST00000526204 COX6A1P12074 109 aa18.67■□□□□ 0.58
VPS28-205ENST00000526204 HIST1H3AP68431 136 aa18.67■□□□□ 0.58
VPS28-205ENST00000526204 ATXN7L3Q14CW9 347 aaPredicted RBP18.67■□□□□ 0.58
VPS28-205ENST00000526204 HIST2H3PS2Q5TEC6 136 aa18.67■□□□□ 0.58
VPS28-205ENST00000526204 HIST2H3AQ71DI3 136 aa18.67■□□□□ 0.58
VPS28-205ENST00000526204 MR1Q95460 341 aa18.67■□□□□ 0.58
VPS28-205ENST00000526204 LYZL4Q96KX0 146 aa18.67■□□□□ 0.58
VPS28-205ENST00000526204 GNRHR2Q96P88 292 aa18.67■□□□□ 0.58
VPS28-205ENST00000526204 CDC6Q99741 560 aa18.67■□□□□ 0.58
VPS28-205ENST00000526204 CHMP1AQ9HD42 196 aaPredicted RBP18.67■□□□□ 0.58
VPS28-205ENST00000526204 COQ3Q9NZJ6 369 aa18.67■□□□□ 0.58
VPS28-205ENST00000526204 A0A0B4J2A0 478 aa18.67■□□□□ 0.58
VPS28-205ENST00000526204 A0A1W2PP11 408 aa18.67■□□□□ 0.58
VPS28-205ENST00000526204 EEF1E1-BLOC1S5C9J1V9 151 aa18.67■□□□□ 0.58
VPS28-205ENST00000526204 E9PLN8 166 aa18.67■□□□□ 0.58
VPS28-205ENST00000526204 F5H5K5 113 aa18.67■□□□□ 0.58
VPS28-205ENST00000526204 LGALS8O00214 317 aa18.67■□□□□ 0.58
VPS28-205ENST00000526204 DHHO43323 396 aa18.67■□□□□ 0.58
VPS28-205ENST00000526204 ZIC3O60481 467 aa18.67■□□□□ 0.58
VPS28-205ENST00000526204 RAD51DO75771 328 aa18.67■□□□□ 0.58
VPS28-205ENST00000526204 WDPCPO95876 746 aa18.67■□□□□ 0.58
VPS28-205ENST00000526204 CCL3P10147 92 aa18.67■□□□□ 0.58
VPS28-205ENST00000526204 HOXD11P31277 338 aaPredicted RBP18.67■□□□□ 0.58
VPS28-205ENST00000526204 SLC6A9P48067 706 aa18.67■□□□□ 0.58
VPS28-205ENST00000526204 TRA2AQ13595 282 aaKnown RBP eCLIP18.67■□□□□ 0.58
VPS28-205ENST00000526204 Q6ZSR3 168 aa18.67■□□□□ 0.58
VPS28-205ENST00000526204 TMEM123Q8N131 208 aa18.67■□□□□ 0.58
VPS28-205ENST00000526204 AGBL5Q8NDL9 886 aa18.67■□□□□ 0.58
VPS28-205ENST00000526204 OR9K2Q8NGE7 335 aa18.67■□□□□ 0.58
VPS28-205ENST00000526204 NABP1Q96AH0 204 aa18.67■□□□□ 0.58
VPS28-205ENST00000526204 NTNG2Q96CW9 530 aa18.67■□□□□ 0.58
VPS28-205ENST00000526204 SHPKQ9UHJ6 478 aa18.67■□□□□ 0.58
VPS28-205ENST00000526204 GPR160Q9UJ42 338 aa18.67■□□□□ 0.58
VPS28-205ENST00000526204 MTRF1O75570 445 aaKnown RBP18.66■□□□□ 0.58
VPS28-205ENST00000526204 GP1BAP07359 652 aa18.66■□□□□ 0.58
VPS28-205ENST00000526204 AMY2BP19961 511 aa18.66■□□□□ 0.58
VPS28-205ENST00000526204 OTX1P32242 354 aaPredicted RBP18.66■□□□□ 0.58
VPS28-205ENST00000526204 TAS2R46P59540 309 aa18.66■□□□□ 0.58
VPS28-205ENST00000526204 ZNF385AQ96PM9 386 aaKnown RBP18.66■□□□□ 0.58
VPS28-205ENST00000526204 SH2D2AQ9NP31 389 aa18.66■□□□□ 0.58
VPS28-205ENST00000526204 MBD2Q9UBB5 411 aa18.66■□□□□ 0.58
VPS28-205ENST00000526204 DKKL1Q9UK85 242 aa18.66■□□□□ 0.58
VPS28-205ENST00000526204 COL6A3P12111 3177 aa18.66■□□□□ 0.58
VPS28-205ENST00000526204 KLF7O75840 302 aaPredicted RBP18.65■□□□□ 0.58
VPS28-205ENST00000526204 FPR2P25090 351 aa18.65■□□□□ 0.58
VPS28-205ENST00000526204 SERPINF1P36955 418 aa18.65■□□□□ 0.58
VPS28-205ENST00000526204 OR3A2P47893 321 aa18.65■□□□□ 0.58
VPS28-205ENST00000526204 PHYHD1Q5SRE7 291 aa18.65■□□□□ 0.58
VPS28-205ENST00000526204 RTL6Q6ICC9 239 aa18.65■□□□□ 0.58
VPS28-205ENST00000526204 SLC16A14Q7RTX9 510 aa18.65■□□□□ 0.58
VPS28-205ENST00000526204 PEG10Q86TG7 708 aaKnown RBP18.65■□□□□ 0.58
VPS28-205ENST00000526204 ARMC10Q8N2F6 343 aa18.65■□□□□ 0.58
VPS28-205ENST00000526204 ARPC5LQ9BPX5 153 aa18.65■□□□□ 0.58
VPS28-205ENST00000526204 C5orf66Q9H5L9 145 aa18.65■□□□□ 0.58
VPS28-205ENST00000526204 PROK2Q9HC23 129 aa18.65■□□□□ 0.58
VPS28-205ENST00000526204 RAB18Q9NP72 206 aa18.65■□□□□ 0.58
VPS28-205ENST00000526204 HS3ST3B1Q9Y662 390 aa18.65■□□□□ 0.58
VPS28-205ENST00000526204 C13orf42A0A1B0GVH6 325 aa18.65■□□□□ 0.58
VPS28-205ENST00000526204 SERPINE3A8MV23 424 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms