RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 SP6Q3SY56 376 aa1.94□□□□□ -2.1
CD44-215ENST00000525241 APRG1Q8IVJ8 170 aa1.94□□□□□ -2.1
CD44-215ENST00000525241 C8orf31Q8N9H6 132 aa1.94□□□□□ -2.1
CD44-215ENST00000525241 C11orf70Q9BRQ4 267 aa1.94□□□□□ -2.1
CD44-215ENST00000525241 ELOVL6Q9H5J4 265 aa1.94□□□□□ -2.1
CD44-215ENST00000525241 DYRK4Q9NR20 520 aa1.94□□□□□ -2.1
CD44-215ENST00000525241 ZNF586Q9NXT0 402 aa1.94□□□□□ -2.1
CD44-215ENST00000525241 LTBP4Q8N2S1 1624 aa1.94□□□□□ -2.1
CD44-215ENST00000525241 CCL15-CCL14A0A0B4J2E2 113 aa1.93□□□□□ -2.1
CD44-215ENST00000525241 SCO1O75880 301 aa1.93□□□□□ -2.1
CD44-215ENST00000525241 TDP2O95551 362 aa1.93□□□□□ -2.1
CD44-215ENST00000525241 PFN1P07737 140 aaKnown RBP1.93□□□□□ -2.1
CD44-215ENST00000525241 LGALS3P17931 250 aaKnown RBP1.93□□□□□ -2.1
CD44-215ENST00000525241 APLNRP35414 380 aa1.93□□□□□ -2.1
CD44-215ENST00000525241 GALR1P47211 349 aa1.93□□□□□ -2.1
CD44-215ENST00000525241 KRTAP12-3P60328 96 aa1.93□□□□□ -2.1
CD44-215ENST00000525241 PRKCDQ05655 676 aa1.93□□□□□ -2.1
CD44-215ENST00000525241 ZNF33AQ06730 810 aa1.93□□□□□ -2.1
CD44-215ENST00000525241 CCL15Q16663 113 aa1.93□□□□□ -2.1
CD44-215ENST00000525241 C6orf99Q4VX62 202 aa1.93□□□□□ -2.1
CD44-215ENST00000525241 MFSD14CQ5VZR4 134 aa1.93□□□□□ -2.1
CD44-215ENST00000525241 TMEM236Q5W0B7 351 aa1.93□□□□□ -2.1
CD44-215ENST00000525241 KDM4DQ6B0I6 523 aa1.93□□□□□ -2.1
CD44-215ENST00000525241 RWDD4Q6NW29 188 aaKnown RBP1.93□□□□□ -2.1
CD44-215ENST00000525241 Q6ZSR6 202 aa1.93□□□□□ -2.1
CD44-215ENST00000525241 ADM2Q7Z4H4 148 aa1.93□□□□□ -2.1
CD44-215ENST00000525241 SGPP2Q8IWX5 399 aa1.93□□□□□ -2.1
CD44-215ENST00000525241 HGDQ93099 445 aa1.93□□□□□ -2.1
CD44-215ENST00000525241 SEC22CQ9BRL7 303 aa1.93□□□□□ -2.1
CD44-215ENST00000525241 EMC6Q9BV81 110 aa1.93□□□□□ -2.1
CD44-215ENST00000525241 AUNIPQ9H7T9 357 aa1.93□□□□□ -2.1
CD44-215ENST00000525241 MRPS30Q9NP92 439 aaKnown RBP1.93□□□□□ -2.1
CD44-215ENST00000525241 MYEF2Q9P2K5 600 aaKnown RBP1.93□□□□□ -2.1
CD44-215ENST00000525241 YARS2Q9Y2Z4 477 aaKnown RBP1.93□□□□□ -2.1
CD44-215ENST00000525241 MROH7Q68CQ1 1323 aa1.92□□□□□ -2.1
CD44-215ENST00000525241 ADGRA3Q8IWK6 1321 aa1.92□□□□□ -2.1
CD44-215ENST00000525241 OR6C70A6NIJ9 312 aa1.92□□□□□ -2.1
CD44-215ENST00000525241 TRIM64CA6NLI5 447 aa1.92□□□□□ -2.1
CD44-215ENST00000525241 CENPBD1B2RD01 187 aa1.92□□□□□ -2.1
CD44-215ENST00000525241 SLC19A2O60779 497 aa1.92□□□□□ -2.1
CD44-215ENST00000525241 CTNSO60931 367 aa1.92□□□□□ -2.1
CD44-215ENST00000525241 IGLV7-43P04211 117 aa1.92□□□□□ -2.1
CD44-215ENST00000525241 TACSTD2P09758 323 aa1.92□□□□□ -2.1
CD44-215ENST00000525241 AP1S2P56377 157 aa1.92□□□□□ -2.1
CD44-215ENST00000525241 KDSRQ06136 332 aa1.92□□□□□ -2.1
CD44-215ENST00000525241 BTN1A1Q13410 526 aa1.92□□□□□ -2.1
CD44-215ENST00000525241 TFDP2Q14188 446 aa1.92□□□□□ -2.1
CD44-215ENST00000525241 RPEL1Q2QD12 228 aa1.92□□□□□ -2.1
CD44-215ENST00000525241 UNC93AQ86WB7 457 aa1.92□□□□□ -2.1
CD44-215ENST00000525241 RAB43Q86YS6 212 aa1.92□□□□□ -2.1
CD44-215ENST00000525241 OFCC1Q8IZS5 231 aa1.92□□□□□ -2.1
CD44-215ENST00000525241 SLC25A29Q8N8R3 303 aa1.92□□□□□ -2.1
CD44-215ENST00000525241 OR52N1Q8NH53 320 aa1.92□□□□□ -2.1
CD44-215ENST00000525241 ZCCHC13Q8WW36 166 aaKnown RBP1.92□□□□□ -2.1
CD44-215ENST00000525241 S100PBPQ96BU1 408 aa1.92□□□□□ -2.1
CD44-215ENST00000525241 FAM19A4Q96LR4 140 aa1.92□□□□□ -2.1
CD44-215ENST00000525241 JSRP1Q96MG2 331 aaPredicted RBP1.92□□□□□ -2.1
CD44-215ENST00000525241 OPALINQ96PE5 141 aa1.92□□□□□ -2.1
CD44-215ENST00000525241 TM2D3Q9BRN9 247 aa1.92□□□□□ -2.1
CD44-215ENST00000525241 LYRM4Q9HD34 91 aa1.92□□□□□ -2.1
CD44-215ENST00000525241 TREX1Q9NSU2 369 aa1.92□□□□□ -2.1
CD44-215ENST00000525241 ZNF230Q9UIE0 474 aaPredicted RBP1.92□□□□□ -2.1
CD44-215ENST00000525241 TBC1D24Q9ULP9 559 aa1.92□□□□□ -2.1
CD44-215ENST00000525241 RPRD2Q5VT52 1461 aaKnown RBP1.92□□□□□ -2.1
CD44-215ENST00000525241 DHX57Q6P158 1386 aaKnown RBP1.91□□□□□ -2.1
CD44-215ENST00000525241 PSPHP1O15172 72 aa1.91□□□□□ -2.1
CD44-215ENST00000525241 KRT16P08779 473 aa1.91□□□□□ -2.1
CD44-215ENST00000525241 UBCP0CG48 685 aaKnown RBP1.91□□□□□ -2.1
CD44-215ENST00000525241 INAFM2P0DMQ5 153 aa1.91□□□□□ -2.1
CD44-215ENST00000525241 OR1G1P47890 313 aa1.91□□□□□ -2.1
CD44-215ENST00000525241 OR2B8PP59922 312 aa1.91□□□□□ -2.1
CD44-215ENST00000525241 IRF8Q02556 426 aa1.91□□□□□ -2.1
CD44-215ENST00000525241 RAD51Q06609 339 aa1.91□□□□□ -2.1
CD44-215ENST00000525241 OR1Q1Q15612 314 aa1.91□□□□□ -2.1
CD44-215ENST00000525241 GABRA6Q16445 453 aa1.91□□□□□ -2.1
CD44-215ENST00000525241 BEX5Q5H9J7 111 aa1.91□□□□□ -2.1
CD44-215ENST00000525241 TMEM69Q5SWH9 247 aa1.91□□□□□ -2.1
CD44-215ENST00000525241 ORMDL3Q8N138 153 aa1.91□□□□□ -2.1
CD44-215ENST00000525241 SLC26A10Q8NG04 563 aa1.91□□□□□ -2.1
CD44-215ENST00000525241 ASZ1Q8WWH4 475 aa1.91□□□□□ -2.1
CD44-215ENST00000525241 AGMATQ9BSE5 352 aa1.91□□□□□ -2.1
CD44-215ENST00000525241 SFXN3Q9BWM7 321 aa1.91□□□□□ -2.1
CD44-215ENST00000525241 EXO5Q9H790 373 aa1.91□□□□□ -2.1
CD44-215ENST00000525241 RWDD2AQ9UIY3 292 aa1.91□□□□□ -2.1
CD44-215ENST00000525241 CAB39Q9Y376 341 aaPredicted RBP1.91□□□□□ -2.1
CD44-215ENST00000525241 TICRRQ7Z2Z1 1910 aa1.91□□□□□ -2.1
CD44-215ENST00000525241 IGKV1-6A0A0C4DH72 117 aa1.9□□□□□ -2.11
CD44-215ENST00000525241 ISPDA4D126 451 aa1.9□□□□□ -2.11
CD44-215ENST00000525241 A8MWL6 223 aa1.9□□□□□ -2.11
CD44-215ENST00000525241 ZBTB5O15062 677 aa1.9□□□□□ -2.11
CD44-215ENST00000525241 XRCC2O43543 280 aa1.9□□□□□ -2.11
CD44-215ENST00000525241 DNAJB6O75190 326 aa1.9□□□□□ -2.11
CD44-215ENST00000525241 FSTL3O95633 263 aa1.9□□□□□ -2.11
CD44-215ENST00000525241 IGLV6-57P01721 117 aa1.9□□□□□ -2.11
CD44-215ENST00000525241 OR8G3PP0DMU2 310 aa1.9□□□□□ -2.11
CD44-215ENST00000525241 KRTAP12-4P60329 112 aa1.9□□□□□ -2.11
CD44-215ENST00000525241 HADHQ16836 314 aaKnown RBP1.9□□□□□ -2.11
CD44-215ENST00000525241 OR2T5Q6IEZ7 315 aa1.9□□□□□ -2.11
CD44-215ENST00000525241 DAZ4Q86SG3 579 aaKnown RBP1.9□□□□□ -2.11
CD44-215ENST00000525241 NT5DC3Q86UY8 548 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms