RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 A8MXK9 166 aa10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 LGALS8O00214 317 aa10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 EBAG9O00559 213 aa10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 VENTXO95231 258 aa10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 APOL3O95236 402 aa10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 GYPAP02724 150 aa10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 PITPNBP48739 271 aa10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 RIDAP52758 137 aaKnown RBP10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 ROM1Q03395 351 aa10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 MFGE8Q08431 387 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 MZT1Q08AG7 82 aa10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 PRDX4Q13162 271 aa10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 ZIK1Q3SY52 487 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 DMRTC1Q5HYR2 192 aa10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 DEGS2Q6QHC5 323 aa10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 PLEKHG7Q6ZR37 379 aa10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 DCDC5Q6ZRR9 648 aa10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 NLRC3Q7RTR2 1065 aa10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 COMMD2Q86X83 199 aa10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 ZNF679Q8IYX0 411 aa10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 GCSAMQ8N6F7 178 aa10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 TEX29Q8N6K0 151 aa10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 PLPP7Q8NBV4 271 aa10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 OR1M1Q8NGA1 313 aa10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 OR51G2Q8NGK0 314 aa10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 LRRC29Q8WV35 223 aa10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 ASB17Q8WXJ9 295 aa10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 UBE2FQ969M7 185 aa10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 TBX5Q99593 518 aa10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 RBM4BQ9BQ04 359 aaKnown RBP10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 GABARAPL3Q9BY60 117 aa10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 PBOV1Q9GZY1 135 aa10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 RASSF4Q9H2L5 321 aa10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 GTF2A1LQ9UNN4 478 aa10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 AUP1Q9Y679 476 aa10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 TMEM14AQ9Y6G1 99 aa10.72□□□□□ -0.69
TRAPPC4-205ENST00000525079 COL6A5A8TX70 2615 aa10.71□□□□□ -0.69
TRAPPC4-205ENST00000525079 OOEPA6NGQ2 149 aa10.71□□□□□ -0.69
TRAPPC4-205ENST00000525079 ANXA2P2A6NMY6 339 aa10.71□□□□□ -0.69
TRAPPC4-205ENST00000525079 ZNF670-ZNF695F2Z2N8 137 aa10.71□□□□□ -0.69
TRAPPC4-205ENST00000525079 EI24O14681 340 aa10.71□□□□□ -0.69
TRAPPC4-205ENST00000525079 ZNF254O75437 659 aa10.71□□□□□ -0.69
TRAPPC4-205ENST00000525079 FSTL3O95633 263 aa10.71□□□□□ -0.69
TRAPPC4-205ENST00000525079 GMFBP60983 142 aa10.71□□□□□ -0.69
TRAPPC4-205ENST00000525079 ELF3P78545 371 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC4-205ENST00000525079 WDR25Q64LD2 544 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC4-205ENST00000525079 ZNF322Q6U7Q0 402 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC4-205ENST00000525079 ZNF841Q6ZN19 808 aa10.71□□□□□ -0.69
TRAPPC4-205ENST00000525079 KCTD8Q6ZWB6 473 aa10.71□□□□□ -0.69
TRAPPC4-205ENST00000525079 SSX6Q7RTT6 188 aa10.71□□□□□ -0.69
TRAPPC4-205ENST00000525079 GID4Q8IVV7 300 aa10.71□□□□□ -0.69
TRAPPC4-205ENST00000525079 FAM81AQ8TBF8 368 aa10.71□□□□□ -0.69
TRAPPC4-205ENST00000525079 OR51E1Q8TCB6 317 aa10.71□□□□□ -0.69
TRAPPC4-205ENST00000525079 RPL3LQ92901 407 aaKnown RBP10.71□□□□□ -0.69
TRAPPC4-205ENST00000525079 ITPKCQ96DU7 683 aa10.71□□□□□ -0.69
TRAPPC4-205ENST00000525079 SEH1LQ96EE3 360 aa10.71□□□□□ -0.69
TRAPPC4-205ENST00000525079 FAM71F1Q96KD3 344 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC4-205ENST00000525079 SLC6A7Q99884 636 aa10.71□□□□□ -0.69
TRAPPC4-205ENST00000525079 MICU1Q9BPX6 476 aa10.71□□□□□ -0.69
TRAPPC4-205ENST00000525079 MRI1Q9BV20 369 aa10.71□□□□□ -0.69
TRAPPC4-205ENST00000525079 FGF23Q9GZV9 251 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC4-205ENST00000525079 CTSZQ9UBR2 303 aa10.71□□□□□ -0.69
TRAPPC4-205ENST00000525079 CLN8Q9UBY8 286 aa10.71□□□□□ -0.69
TRAPPC4-205ENST00000525079 IGHV3OR16-10A0A075B7F0 116 aa10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 ACOD1A6NK06 481 aa10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 CDIPTO14735 213 aa10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 ADAM20O43506 726 aa10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 CST4P01036 141 aa10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 FSHBP01225 129 aa10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 LHBP01229 141 aa10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 PSMB10P40306 273 aa10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 MAP2K3P46734 347 aa10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 IL5RAQ01344 420 aa10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 PAX2Q02962 417 aa10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 SCGB2A2Q13296 93 aa10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 ZNF829Q3KNS6 432 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 ARMCX4Q5H9R4 360 aa10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 KLF17Q5JT82 389 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 ZFP1Q6P2D0 407 aa10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 WDR82Q6UXN9 313 aa10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 FAM90A1Q86YD7 464 aa10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 GALNT4Q8N4A0 578 aa10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 FTMTQ8N4E7 242 aa10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 ZNF418Q8TF45 676 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 RAB40AQ8WXH6 277 aa10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 OR5P3Q8WZ94 311 aa10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 EME1Q96AY2 570 aa10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 RNF170Q96K19 258 aa10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 TECTBQ96PL2 329 aa10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 NUDT16L1Q9BRJ7 211 aaKnown RBP10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 RTL8AQ9BWD3 113 aa10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 GPR84Q9NQS5 396 aa10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 CLN6Q9NWW5 311 aa10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 HAO2Q9NYQ3 351 aa10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 WARS2Q9UGM6 360 aaKnown RBP10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 MRM2Q9UI43 246 aaKnown RBP10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 MPC1Q9Y5U8 109 aa10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 WNK2Q9Y3S1 2297 aa10.7□□□□□ -0.7
TRAPPC4-205ENST00000525079 TRAV38-1A0A0B4J264 116 aa10.69□□□□□ -0.7
TRAPPC4-205ENST00000525079 IGHV2-70DA0A0C4DH43 119 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms