RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 ADAT3Q96EY9 351 aaPredicted RBP3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 RNF170Q96K19 258 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 ZNF488Q96MN9 340 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 COG8Q96MW5 612 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 SPACA5Q96QH8 159 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 REG4Q9BYZ8 158 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 CXXC4Q9H2H0 198 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 SP140LQ9H930 580 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 LPAR2Q9HBW0 351 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 PLCXD1Q9NUJ7 323 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 FKBP14Q9NWM8 211 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 C1orf123Q9NWV4 160 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 CHCHD3Q9NX63 227 aaKnown RBP3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 SCN3BQ9NY72 215 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 RAB26Q9ULW5 256 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 CAB39Q9Y376 341 aaPredicted RBP3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 EXOSC1Q9Y3B2 195 aaKnown RBP3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 PCDHGB1Q9Y5G3 927 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 SNX5Q9Y5X3 404 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 HSPE1-MOB4S4R3N1 261 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 SPTBN1Q01082 2364 aaKnown RBP3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 APCP25054 2843 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 UNC79Q9P2D8 2635 aa3.89□□□□□ -1.79
CHMP4A-202ENST00000524955 SETXQ7Z333 2677 aaKnown RBP3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 PKDREJQ9NTG1 2253 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 CACNA1DQ01668 2161 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 A0A0U1RQV5 110 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 ZNF816-ZNF321PA0A0X1KG74 233 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 A0A1B0GW55 424 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 IRGMA1A4Y4 181 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 ACOD1A6NK06 481 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 ZNF732B4DXR9 585 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 H3BSA7 217 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 J3QW42 95 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 CDIPTO14735 213 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 DENRO43583 198 aaKnown RBP3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 RGS10O43665 173 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 GMDSO60547 372 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 RHBDL1O75783 438 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 DHRS3O75911 302 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 NRASP01111 189 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 IGLV3-1P01715 115 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 RPSAP08865 295 aaKnown RBP3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 DUX4L2P0CJ85 424 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 DUX4L3P0CJ86 424 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 DUX4L4P0CJ87 422 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 DUX4L5P0CJ88 424 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 DUX4L6P0CJ89 424 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 DUX4L7P0CJ90 424 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 PIPP12273 146 aaPredicted RBP3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 CD99P14209 185 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 PAX1P15863 534 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 CELP19835 753 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 TNFSF4P23510 183 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 DCTDP32321 178 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 CRYBB2P43320 205 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 NR4A2P43354 598 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 GPR6P46095 362 aaPredicted RBP3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 SNU13P55769 128 aaKnown RBP3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 SEC61A1P61619 476 aaKnown RBP3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 SLC35A2P78381 396 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 RIPPLY1Q0D2K3 151 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 MED21Q13503 144 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 CDK5R1Q15078 307 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 OR8B8Q15620 311 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 UBE2V2Q15819 145 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 HFEQ30201 348 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 PCGF3Q3KNV8 242 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 FAM27D1Q5T7N8 215 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 SHEQ5VZ18 495 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 DUX4L9Q6RFH8 374 aaPredicted RBP3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 METAP1DQ6UB28 335 aaPredicted RBP3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 LYPD2Q6UXB3 125 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 TMPRSS11AQ6ZMR5 421 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 DOK3Q7L591 496 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 KCTD20Q7Z5Y7 419 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 C11orf53Q8IXP5 236 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 C1orf174Q8IYL3 243 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 ZDHHC23Q8IYP9 409 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 LRRC75A-AS1Q8N1F1 130 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 SYS1Q8N2H4 156 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 FGFRL1Q8N441 504 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 NANOGP1Q8N7R0 232 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 ZNF485Q8NCK3 441 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 OR5T2Q8NGG2 359 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 OR5D18Q8NGL1 313 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 OR13C9Q8NGT0 318 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 TSEN15Q8WW01 171 aaKnown RBP3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 OR5P3Q8WZ94 311 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 GHSRQ92847 366 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 MYDGFQ969H8 173 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 TMEM203Q969S6 136 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 ITPKCQ96DU7 683 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 MRPL48Q96GC5 212 aaKnown RBP3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 HIST1H2AAQ96QV6 131 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 PIMREGQ9BSJ6 248 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 TMED9Q9BVK6 235 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 JAM3Q9BX67 310 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 EGLN1Q9GZT9 426 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 COMMD4Q9H0A8 199 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms