RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 SLC22A24Q8N4F4 322 aa11.65□□□□□ -0.54
CAPN1-202ENST00000524773 EDARADDQ8WWZ3 215 aa11.65□□□□□ -0.54
CAPN1-202ENST00000524773 JSRP1Q96MG2 331 aaPredicted RBP11.65□□□□□ -0.54
CAPN1-202ENST00000524773 ZNF701Q9NV72 531 aaPredicted RBP11.65□□□□□ -0.54
CAPN1-202ENST00000524773 FAM206AQ9NX38 181 aa11.65□□□□□ -0.54
CAPN1-202ENST00000524773 FBXL17Q9UF56 701 aa11.65□□□□□ -0.54
CAPN1-202ENST00000524773 POLR1DQ9Y2S0 133 aa11.65□□□□□ -0.54
CAPN1-202ENST00000524773 SLC33A1O00400 549 aaPredicted RBP11.65□□□□□ -0.54
CAPN1-202ENST00000524773 AHSA1O95433 338 aa11.65□□□□□ -0.54
CAPN1-202ENST00000524773 DDAH2O95865 285 aa11.65□□□□□ -0.54
CAPN1-202ENST00000524773 FCGR3AP08637 254 aa11.65□□□□□ -0.54
CAPN1-202ENST00000524773 KLK2P20151 261 aa11.65□□□□□ -0.54
CAPN1-202ENST00000524773 BIDP55957 195 aa11.65□□□□□ -0.54
CAPN1-202ENST00000524773 CSNK2A1P68400 391 aaPredicted RBP11.65□□□□□ -0.54
CAPN1-202ENST00000524773 TSPO2Q5TGU0 170 aa11.65□□□□□ -0.54
CAPN1-202ENST00000524773 APCDD1LQ8NCL9 501 aa11.65□□□□□ -0.54
CAPN1-202ENST00000524773 CSNK2A3Q8NEV1 391 aa11.65□□□□□ -0.54
CAPN1-202ENST00000524773 GPBAR1Q8TDU6 330 aa11.65□□□□□ -0.54
CAPN1-202ENST00000524773 CCNL2Q96S94 520 aaPredicted RBP11.65□□□□□ -0.54
CAPN1-202ENST00000524773 SLC26A1Q9H2B4 701 aa11.65□□□□□ -0.54
CAPN1-202ENST00000524773 SPACA1Q9HBV2 294 aa11.65□□□□□ -0.54
CAPN1-202ENST00000524773 CACFD1Q9UGQ2 172 aa11.65□□□□□ -0.54
CAPN1-202ENST00000524773 DXOO77932 396 aaKnown RBP11.64□□□□□ -0.55
CAPN1-202ENST00000524773 NSA2O95478 260 aaKnown RBP11.64□□□□□ -0.55
CAPN1-202ENST00000524773 OR13C7P0DN81 318 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 HKR1P10072 659 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 OR3A2P47893 321 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 CX3CR1P49238 355 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 NOVA1P51513 510 aaKnown RBP11.64□□□□□ -0.55
CAPN1-202ENST00000524773 ECH1Q13011 328 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 TOMM20Q15388 145 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 NSDHLQ15738 373 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 IAH1Q2TAA2 248 aaPredicted RBP11.64□□□□□ -0.55
CAPN1-202ENST00000524773 PHF19Q5T6S3 580 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 AADACL3Q5VUY0 350 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 TMEM244Q5VVB8 128 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 HLA-DQA1Q5Y7H0 255 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 BRICD5Q6PL45 260 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 DTX1Q86Y01 620 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 OR5H2Q8NGV7 314 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 AKR7LQ8NHP1 331 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 CD300LFQ8TDQ1 290 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 ZNF721Q8TF20 911 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 EIF5A2Q9GZV4 153 aaKnown RBP11.64□□□□□ -0.55
CAPN1-202ENST00000524773 LANCL2Q9NS86 450 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 FBXO7Q9Y3I1 522 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 TRBV6-7A0A0A0MS04 114 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 C5orf52A6NGY3 159 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 RER1O15258 196 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 DIRAS3O95661 229 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 S100A9P06702 114 aaKnown RBP11.64□□□□□ -0.55
CAPN1-202ENST00000524773 THEGLP0DJG4 465 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 ZNF20P17024 532 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 ACY1Q03154 408 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 MIDNQ504T8 468 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 C9orf152Q5JTZ5 239 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 GKN2Q86XP6 184 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 SMIM8Q96KF7 97 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 SH3BGRL3Q9H299 93 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 SMCO4Q9NRQ5 59 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 CYP8B1Q9UNU6 501 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 CABIN1Q9Y6J0 2220 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 C7orf77A4D0Y5 90 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 CDC14BO60729 498 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 ZNF708P17019 499 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 PGCP20142 388 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 AKT2P31751 481 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 FCGR2CP31995 323 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 SNU13P55769 128 aaKnown RBP11.64□□□□□ -0.55
CAPN1-202ENST00000524773 HSD17B7P56937 341 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 IL34Q6ZMJ4 242 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 GPR84Q9NQS5 396 aa11.64□□□□□ -0.55
CAPN1-202ENST00000524773 A8MVM7 634 aa11.63□□□□□ -0.55
CAPN1-202ENST00000524773 CLN5O75503 358 aa11.63□□□□□ -0.55
CAPN1-202ENST00000524773 LY86O95711 162 aa11.63□□□□□ -0.55
CAPN1-202ENST00000524773 SERPINA2P20848 420 aa11.63□□□□□ -0.55
CAPN1-202ENST00000524773 ACKR3P25106 362 aa11.63□□□□□ -0.55
CAPN1-202ENST00000524773 PTGER4P35408 488 aa11.63□□□□□ -0.55
CAPN1-202ENST00000524773 TNFRSF4P43489 277 aa11.63□□□□□ -0.55
CAPN1-202ENST00000524773 TMEM33P57088 247 aa11.63□□□□□ -0.55
CAPN1-202ENST00000524773 FZD2Q14332 565 aa11.63□□□□□ -0.55
CAPN1-202ENST00000524773 KLHL24Q6TFL4 600 aa11.63□□□□□ -0.55
CAPN1-202ENST00000524773 BATF2Q8N1L9 274 aa11.63□□□□□ -0.55
CAPN1-202ENST00000524773 POC1AQ8NBT0 407 aa11.63□□□□□ -0.55
CAPN1-202ENST00000524773 ZNF248Q8NDW4 579 aa11.63□□□□□ -0.55
CAPN1-202ENST00000524773 OR5D14Q8NGL3 314 aa11.63□□□□□ -0.55
CAPN1-202ENST00000524773 GABRG3Q99928 467 aa11.63□□□□□ -0.55
CAPN1-202ENST00000524773 TMEM59Q9BXS4 323 aa11.63□□□□□ -0.55
CAPN1-202ENST00000524773 FBRSQ9HAH7 460 aa11.63□□□□□ -0.55
CAPN1-202ENST00000524773 A0A0A6YYH2 397 aa11.63□□□□□ -0.55
CAPN1-202ENST00000524773 A6NJ64 397 aa11.63□□□□□ -0.55
CAPN1-202ENST00000524773 TMEM14DPA8MWL7 114 aa11.63□□□□□ -0.55
CAPN1-202ENST00000524773 FAM157AC9JC47 383 aa11.63□□□□□ -0.55
CAPN1-202ENST00000524773 ADAM10O14672 748 aa11.63□□□□□ -0.55
CAPN1-202ENST00000524773 NUDT21O43809 227 aaKnown RBP11.63□□□□□ -0.55
CAPN1-202ENST00000524773 YIF1AO95070 293 aa11.63□□□□□ -0.55
CAPN1-202ENST00000524773 CD5P06127 495 aa11.63□□□□□ -0.55
CAPN1-202ENST00000524773 HIST1H1DP16402 221 aaKnown RBP11.63□□□□□ -0.55
CAPN1-202ENST00000524773 CRABP1P29762 137 aa11.63□□□□□ -0.55
CAPN1-202ENST00000524773 RPL12P30050 165 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms